prot_C-linearis_contig85.16172.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig85.16172.1
Unique Nameprot_C-linearis_contig85.16172.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length320
Homology
BLAST of mRNA_C-linearis_contig85.16172.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 2.230e-95
Identity = 149/275 (54.18%), Postives = 208/275 (75.64%), Query Frame = 0
Query:    6 CKTGFLVLGLQDDEQKIIPVHHAATLITMSLASAWLSLKKVQRLSLFFAHWLSGLVACVGYLIEGMMIAVCWTGTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVVAHRTVTRPKSVSSLPLILLYLAVSVILATVSIPFWDTVYVLGTIFGVLGSDKAETDFIKVSYLWVELVVGVSMFIIVAWLLLFRMEEIKESWNMFRRMRYFFGLTLVGTAVNLGVGICGLLDVIER--NPTVLIYGWLFRYMHITLDTIVLCGAVVERDMNERG 278
            C+TGF  +GLQ+ E KI P+   +TL+++S+ SAW S  KV+RLSLFFAHWLSGLV  + +++E MM+ VCWT + L GFIKA+KF E  + NM+AIT+LAICVNLALIV +HRT+TR +SVSS  L+ L LA+S+ + +V++P W+TVYV+GT F ++ SD+   D + VS  ++E +VG+ MF+I+AWLLLFRM+E+KE W +  R+RY+F LTL+GTAVN+G+GIC  + VI     P + I+ W+ RY+H+ LDT VL G + E+DM+ERG
Sbjct:    7 CETGFTAIGLQEGEDKITPIRVLSTLVSVSVVSAWCSWTKVKRLSLFFAHWLSGLVWGLCFVVEDMMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLREKDMDERG 281          
BLAST of mRNA_C-linearis_contig85.16172.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 1.900e-75
Identity = 128/241 (53.11%), Postives = 175/241 (72.61%), Query Frame = 0
Query:    1 MASHWCKTGFLVLGLQDDEQKIIPVHHAATLITMSLASAWLSLKK-VQRLSLFFAHWLSGLVACVGYLIEGMMIAVCWTGTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVVAHRTVTRPKSVSSLPLILLYLAVSVILATVSIPFWDTVYVLGTIFGVLGSDKAETDFIKVSYLWVELVVGVSMFIIVAWLLLFRMEEIKESWNMFRRMRYFFGLTLVGTAVNLGVGICGLLDVI 240
            M S  C  GF V+GLQ+ E    P+   +TLITMS+ASAW S +K +++L LFF+HWLSGL+  + ++ E  M++VCW G SL   IK +KFFELAA NMLAITNLAICVNLALIV++HRT++R +S S+  LIL++LA+S+ +A +S+PFW  + V GT F V   ++A  D+I V+  +VE  VG+ M +IV WL++FR  EIK+SW M  R+RY+FGLTL+ T VNL +GICG + V+
Sbjct:   27 MFSLKCNAGFFVVGLQEGEAVCTPIRVISTLITMSVASAWFSRRKSIKKLLLFFSHWLSGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVV 267          
BLAST of mRNA_C-linearis_contig85.16172.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 1.510e-65
Identity = 120/233 (51.50%), Postives = 156/233 (66.95%), Query Frame = 0
Query:   67 LIEGMMIAVCWTGTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVVAHRTVTRPKSVSSLPLILLYLAVSVILATVSIPFWDTVYVLGTIFGVLGSDKAETDFIKVSYLWVELVVGVSMFIIVAWLLLFRMEEIKESWNMFRRMRYFFGLTLVGTAVNLGVGICGLLDVIERNPT--VLIYGWLFRYMHITLDTIVLCGAVVERDMNERGDGVSLGSGDLPSEPPAPGG 297
            + +G MI+VCW G  LEGFIKA+K+ E  + NMLAITNLAIC+NLAL+V +HRT++R  SVS+  L+LL+LA+SV+ A  S+PFW    V GT F V  +DKA+ D+I VS + +E VVG+ MFIIV+WL+ FRM  IKE W +  R+RY+F LT++GTAVNL +GI G   V   N    +L   W FRY H+ LDTIVL G +  R M+E G   +  SG      PA  G
Sbjct:    3 MTQGTMISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMDEGGGSAASTSGTSSGRLPASSG 235          
BLAST of mRNA_C-linearis_contig85.16172.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 4.960e-64
Identity = 107/222 (48.20%), Postives = 162/222 (72.97%), Query Frame = 0
Query:   58 SGLVACVGYLIEGMMIAVCWTGTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVVAHRTVTRPKSVSSLPLILLYLAVSVILATVSIPFWDTVYVLGTIFGVLGSDKAETDFIKVSYLWVELVVGVSMFIIVAWLLLFRMEEIKESWNMFRRMRYFFGLTLVGTAVNLGVGICGLLDVIE--RNPTVLIYGWLFRYMHITLDTIVLCGAVVERDMNER 277
            +G++  + +L+E MM+ VCW G +LE  IK +KF ELA+ +MLA+T+LAICVNLALIV +HRT+ R +SVSS  L+ L LA+S+ +   ++P W+TV V+GT F ++ SD+ + D + VS  ++E +VG+ MF+IVAWLLLFR++E+KE W +  R+RY+  LT++GT ++L +GIC  + V+   +   + I+ W+FRY+HI LDT VL G + E+DM+ER
Sbjct:   10 TGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDER 231          
BLAST of mRNA_C-linearis_contig85.16172.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 2.760e-61
Identity = 103/200 (51.50%), Postives = 142/200 (71.00%), Query Frame = 0
Query:   72 MIAVCWTGTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVVAHRTVTRPKSVSSLPLILLYLAVSVILATVSIPFWDTVYVLGTIFGVLGSDKAETDFIKVSYLWVELVVGVSMFIIVAWLLLFRMEEIKESWNMFRRMRYFFGLTLVGTAVNLGVGICGLLDVI--ERNPTVLIYGWLFRYMHITLDTIVLCGAV 269
            M+ VCW G+++ GF+KA+KF EL A NMLAITNLAIC NLAL++++HRT+ R KS SS  L+ L LAVS+ +A  + PFW T  V GT F V   D+   D++ VS  ++E +VG+ MF+IVAWLLLFR+ E+KE W +  R+RY+FGLTL+GT VNL +G+CG + V+       +++  W FR++HI LDT VL G +
Sbjct:    1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVL 200          
BLAST of mRNA_C-linearis_contig85.16172.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 9.960e-61
Identity = 109/224 (48.66%), Postives = 148/224 (66.07%), Query Frame = 0
Query:   58 SGLVACVGYLIEGMMIAVCWTGTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVVAHRTVTRPKSVSSLPLILLYLAVSVILATVSIPFWDTVYVLGTIFGVLGSDKAETDFIKVSYLWVELVVGVSMFIIVAWLLLFRMEEIKESWNMFRRMRYFFGLTLVGTAVNLGVGICGLLDVI--ERNPTVLIYGWLFRYMHITLDTIVLCGAVVERDMNERGD 279
            SG + C+  + E +M++ C+  T+L G IK I F  + + NMLA TNL IC+NLALIV +HRT+TR K+VSS  ++ + L VS  LA  ++P W+T  VLGT F    SD  + DFI +S   +E +VG+ M +IV WL +FRM EIKE W    R+RY+F LTL GTAVNLG+GICG   V    + P   I+ WLFRY+HI+ DT+VL GA+ E  ++ER +
Sbjct:    9 SGTLVCLALMTEDVMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGSIDERAE 232          
BLAST of mRNA_C-linearis_contig85.16172.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 1.710e-59
Identity = 113/231 (48.92%), Postives = 155/231 (67.10%), Query Frame = 0
Query:   72 MIAVCWTGTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVVAHRTVTRPKSVSSLPLILLYLAVSVILATVSIPFWDTVYVLGTIFGVLGSDKAETDFIKVSYLWVELVVGVSMFIIVAWLLLFRMEEIKESWNMFRRMRYFFGLTLVGTAVNLGVGICGLLDVIERN--PTVLIYGWLFRYMHITLDTIVLCGAVVERDMNERGDGVSLGSGDLPSEPPAPGGGTR 300
            MI+VCW G +L  FIK +KF EL A NMLAITNLAICVNL+LIV++ R  +  KS+S+  L+LL+LA+S  LA +++PFW    + GT F  LG +K + +F+ +S   VE +VG+ MF+IV+WLLLFRM EIKE W M   +RY+FGLTL+GT  NL +G+CG + VI     P ++I+ W FR + I LDTIVL   +  + ++ER +      G  P+ PPA   G+R
Sbjct:    1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERAETPPT-DGASPAPPPASSRGSR 230          
BLAST of mRNA_C-linearis_contig85.16172.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 7.400e-56
Identity = 99/172 (57.56%), Postives = 128/172 (74.42%), Query Frame = 0
Query:   72 MIAVCWTGTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVVAHRTVTRPKSVSSLPLILLYLAVSVILATVSIPFWDTVYVLGTIFGVLGSDKAETDFIKVSYLWVELVVGVSMFIIVAWLLLFRMEEIKESWNMFRRMRYFFGLTLVGTAVNLGVGICGLLDVIERN 243
            MI+VCW G  LEGFIKA+K+ E  + NMLAITNLAIC+NLAL+V +HRT++R KSVS+  L+LL+LA+SVI A  S+PFW    V GT F V  +DKA+ D+I VS + +E VVG+ MF+IV+WL+ FRM+ IKE W +  R+RY+F LTL+ TAVNL +GI GL  V   N
Sbjct:    1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYVFRDN 172          
BLAST of mRNA_C-linearis_contig85.16172.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 4.940e-46
Identity = 89/177 (50.28%), Postives = 122/177 (68.93%), Query Frame = 0
Query:   72 MIAVCWTGTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVVAHRTVTRPKSVSSLPLILLYLAVSVILATVSIPFWDTVYVLGTIFGVLGSDKAETDFIKVSYLWVELVVGVSMFIIVAWLLLFRMEEIKESWNMFRRMRYFFGLTLVGTAVNLGVGICGLLDVI---ERNPT 245
            MI+VCW G +L   IK +KF ELA+ NMLA+TNLAICVNLAL+V++HRT++R  S+SS  +I L L ++V  A  ++P W T+ + GT F     DK + D+  VS    E +VG+ M  IVAWLLLFRM+EIKE W +  R+RY+FGLTL+ T VNL +GI G + ++   +R P+
Sbjct:    1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIVGEGQRRPS 177          
BLAST of mRNA_C-linearis_contig85.16172.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 4.830e-43
Identity = 87/175 (49.71%), Postives = 123/175 (70.29%), Query Frame = 0
Query:   68 IEGMMIAVCWTGTSLEGFIKAIKFFELAAFNMLAITNLAICVNLALIVVAHRTVTRP--KSVSSLPLILLYLAVSVILATVSIPFWDTVYVLGTIFGVLGSDKAETDFIKVSYLWVELVVGVSMFIIVAWLLLFRMEEIKESWNMFRRMRYFFGLTLVGTAVNLGVGICGLLDVI 240
            ++  MI+VCWTG +L   IK  KF ELA+ NMLA+TNLAIC+NLAL+V++H    +P   S+SS  LI++ L +S+  A  + PFW+ + + GT F     ++  +D+I +S  ++E  VG+ MF+IVAWLLLFRM EIKE W M  R+RY+FGLTL+ T VNL +GICG++ +I
Sbjct:    1 MQATMISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGD-QQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIYLI 174          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FTK5_ECTSI2.230e-9554.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNM4_ECTSI1.900e-7553.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8K6_9PHAE1.510e-6551.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTK4_ECTSI4.960e-6448.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNN1_ECTSI2.760e-6151.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JWL8_9PHAE9.960e-6148.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNP0_ECTSI1.710e-5948.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LNN2_ECTSI7.400e-5657.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRY2_9PHAE4.940e-4650.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM5_ECTSI4.830e-4349.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 246..270
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 218..240
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 152..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 241..245
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 271..319
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..151
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 250..269
NoneNo IPR availableTMHMMTMhelixcoord: 218..240
NoneNo IPR availableTMHMMTMhelixcoord: 129..151
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 176..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:494623..504251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16172.1mRNA_C-linearis_contig85.16172.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig85 494458..506512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig85.16172.1 ID=prot_C-linearis_contig85.16172.1|Name=mRNA_C-linearis_contig85.16172.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=320bp
MASHWCKTGFLVLGLQDDEQKIIPVHHAATLITMSLASAWLSLKKVQRLS
LFFAHWLSGLVACVGYLIEGMMIAVCWTGTSLEGFIKAIKFFELAAFNML
AITNLAICVNLALIVVAHRTVTRPKSVSSLPLILLYLAVSVILATVSIPF
WDTVYVLGTIFGVLGSDKAETDFIKVSYLWVELVVGVSMFIIVAWLLLFR
MEEIKESWNMFRRMRYFFGLTLVGTAVNLGVGICGLLDVIERNPTVLIYG
WLFRYMHITLDTIVLCGAVVERDMNERGDGVSLGSGDLPSEPPAPGGGTR
TESRGPNNTSKHVTIDPLA*
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