prot_C-linearis_contig85.16152.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig85.16152.1
Unique Nameprot_C-linearis_contig85.16152.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length55
Homology
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BLAST of mRNA_C-linearis_contig85.16152.1 vs. uniprot
Match: D7FLA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLA2_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 6.450e-14
Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 0 
Query:    1 MPVSST---NQRQGNIFTQIAAIFS---HRPSLWTSSLASQAAKDKSVPAYNNTIASLRR 54
            MPVSS+    Q+QGNIFT I+ IFS   HRPSLWT+     AAK++SVPAYNNTIASLRR
Sbjct:    1 MPVSSSASQQQQQGNIFTHISKIFSSFTHRPSLWTN----VAAKERSVPAYNNTIASLRR 56
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLA2_ECTSI6.450e-1466.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:209148..211515 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16152.1mRNA_C-linearis_contig85.16152.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig85 209123..212098 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig85.16152.1 ID=prot_C-linearis_contig85.16152.1|Name=mRNA_C-linearis_contig85.16152.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=55bp
MPVSSTNQRQGNIFTQIAAIFSHRPSLWTSSLASQAAKDKSVPAYNNTIA
SLRR*
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