prot_C-linearis_contig85.16151.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig85.16151.1
Unique Nameprot_C-linearis_contig85.16151.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length196
Homology
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BLAST of mRNA_C-linearis_contig85.16151.1 vs. uniprot
Match: D7FLA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLA3_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 1.980e-92
Identity = 141/170 (82.94%), Postives = 153/170 (90.00%), Query Frame = 0 
Query:   28 IIFPNKN--QIVTMKYRGLSINYAGMGVDMKVDMGLEVFNPNYVPATLKGIVMTMFHEDLAGEEAPFGVVTFSGDAAARLPARGSAIVNAQMEVVSLPTSMAMSITKDVSDGGVIVSRALAIMDVTVMGGDILIEADCLQHMQADVFPIKINEINCKYYYKNVRVMMLPP 195
            ++FP     QIV MKYRGLS+N A +GVDMK+DMGLEVFNPNYVPATLKGIVMTMFHEDL GEEAPFGVVTF+G+ AARLPARGSA+V AQMEVVSLPTSMAM I KDV+DGGVIVSRA A MDV VMGGDILIEADC+QHMQADVFPIKINEI+CKYYYKNVRV +LPP
Sbjct:   19 VMFPRAPTWQIVDMKYRGLSMNIASIGVDMKIDMGLEVFNPNYVPATLKGIVMTMFHEDLGGEEAPFGVVTFAGENAARLPARGSAVVQAQMEVVSLPTSMAMGIAKDVADGGVIVSRASAFMDVKVMGGDILIEADCVQHMQADVFPIKINEIDCKYYYKNVRVPVLPP 188
[Close]
BLAST of mRNA_C-linearis_contig85.16151.1 vs. uniprot
Match: A0A836CLA5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLA5_9STRA)

HSP 1 Score: 102 bits (254), Expect = 7.410e-24
Identity = 64/164 (39.02%), Postives = 100/164 (60.98%), Query Frame = 0 
Query:   35 QIVTMKYRGLSINYA-GMGVDMKVDMGLEVFNPNYVPATLKGIVMTMFHEDLAGEEAPFGVVTFSGDAAARLPARGSAIVNAQMEVVSLPTSMAMSITKDVS-DGGVIVSRALAIMDVTVMGGDIL--IEADCLQHMQADVFPIKINEINCKYYYKNVRVMMLP 194
            QI   KY  +S NY   M  +M+++  LE++N N + A +  I + + H D  G E PF  +  +GD A  LPARGS      M + +L  +MA ++ +D + +GG +V+RA + MDV+V+GG     +EA+C+QH++AD FP+++  I+C+YY    RV MLP
Sbjct:   27 QIRGQKYTSVSFNYDFTMAAEMELE--LELYNDNLLSAHVNAIELEVLHRDAWGVERPFARIHVAGDFA--LPARGSVRRAGTMVMDALAPAMAGALARDAAANGGTLVTRAHSTMDVSVLGGAARARLEAECVQHLRADAFPMEVTYIDCRYYMGRHRVPMLP 186
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLA3_ECTSI1.980e-9282.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLA5_9STRA7.410e-2439.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:201620..204143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16151.1mRNA_C-linearis_contig85.16151.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig85 200370..204217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig85.16151.1 ID=prot_C-linearis_contig85.16151.1|Name=mRNA_C-linearis_contig85.16151.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=196bp
MRAWLLSNTFPLLHDNVCRLVPPHEYLIIFPNKNQIVTMKYRGLSINYAG
MGVDMKVDMGLEVFNPNYVPATLKGIVMTMFHEDLAGEEAPFGVVTFSGD
AAARLPARGSAIVNAQMEVVSLPTSMAMSITKDVSDGGVIVSRALAIMDV
TVMGGDILIEADCLQHMQADVFPIKINEINCKYYYKNVRVMMLPP*
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