prot_C-linearis_contig85.16146.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig85.16146.1
Unique Name	prot_C-linearis_contig85.16146.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	429

Homology

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BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot
Match: A0A6H5JE16_9PHAE (MHD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE16_9PHAE)

HSP 1 Score: 834 bits (2154), Expect = 4.480e-305
Identity = 424/428 (99.07%), Postives = 424/428 (99.07%), Query Frame = 0

Query:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTVNGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQASACEGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDAREWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT 428
            MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTV GVTFVYVQYNNLILMS TKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQAS  EGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDAREWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT
Sbjct:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTVEGVTFVYVQYNNLILMSVTKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQAS--EGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDAREWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT 426

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BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot
Match: A0A835Z8U5_9STRA (Clathrin assembly complex, medium subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U5_9STRA)

HSP 1 Score: 755 bits (1950), Expect = 5.060e-274
Identity = 374/427 (87.59%), Postives = 402/427 (94.15%), Query Frame = 0

Query:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTVNGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQASACEGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDAREWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 427
            MVASA+FI+D KGKIIISRNFRGDVPM++SE FS +IQEREE +Q+P+FT  G TFVY++YNNL+LMS TKRNSNVALMLVYLYKL DVF+DYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ    EGNRLE APRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLL SSNGTVLHSEI+GAVKMKSFLSGMPELKLGLNDKLLFES+GR+SG  KAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRL THVKPLIWVE VVEPHSHSRIEYM+KAKSQFKSRS+ANNVEI+IPVP DVDSP FKAS+GSVAY P+++A VWSIKQF+GS+EYLMRAHFGLPSI+A+D  EW+APIQV+FEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM
Sbjct:    1 MVASAVFILDAKGKIIISRNFRGDVPMSISERFSLYIQEREETDQQPVFTEEGYTFVYIRYNNLLLMSVTKRNSNVALMLVYLYKLTDVFRDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ----EGNRLEVAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLVSSNGTVLHSEILGAVKMKSFLSGMPELKLGLNDKLLFESTGRTSGKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLATHVKPLIWVETVVEPHSHSRIEYMVKAKSQFKSRSVANNVEIVIPVPGDVDSPAFKASVGSVAYHPERNAAVWSIKQFHGSREYLMRAHFGLPSIAADDQAEWRAPIQVRFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 423

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BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot
Match: A0A7S2R9Z0_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2R9Z0_9STRA)

HSP 1 Score: 723 bits (1867), Expect = 3.750e-261
Identity = 358/428 (83.64%), Postives = 393/428 (91.82%), Query Frame = 0

Query:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTVNGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQASACEGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDAREWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT 428
            M  SALF+MDLKGKIIISRN+RGDVPM+VSE F+ +IQE EE + +PIFT +G TFVY+++NNL LM+ TKRN+NVALM  YLY+LV VFKDYFGEL+EESIRDNFVIIYELLDET DFGYPQ+M+SKILREYITQ    E NR E A RPPVA+TNAVSWRSEGIKHRKNEIFLDVVEKLNLL SSNGTVL+SEIVGA+KMKSFLSGMPELKLGLNDKL+FE++GR     KAVEL DIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRL+THVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVP+DVDSP+FKASIG+V YLPD+DAVVW+IKQFNGS+EYLMRAHFGLPS+ AE+   W+API+V+FEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT
Sbjct:   15 MSTSALFVMDLKGKIIISRNYRGDVPMSVSERFARYIQETEEFDMRPIFTEDGYTFVYIKHNNLYLMTVTKRNANVALMFTYLYRLVSVFKDYFGELDEESIRDNFVIIYELLDETNDFGYPQSMDSKILREYITQ----ESNRHEVAARPPVAVTNAVSWRSEGIKHRKNEIFLDVVEKLNLLVSSNGTVLNSEIVGAIKMKSFLSGMPELKLGLNDKLMFEATGRPMSKGKAVELADIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPSDVDSPSFKASIGTVVYLPDRDAVVWTIKQFNGSREYLMRAHFGLPSVGAEEPEHWRAPIEVQFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT 438

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BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot
Match: F0YHG2_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHG2_AURAN)

HSP 1 Score: 714 bits (1843), Expect = 1.010e-257
Identity = 344/427 (80.56%), Postives = 391/427 (91.57%), Query Frame = 0

Query:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTVNGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQASACEGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDAREWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 427
            M  S +F+MDLKG++IISRN+RGDVPM+VSE F  ++QE +EM+Q+PIFT  G TF Y ++NNL LM  TKRNSN+AL+L+YLY+LV VFKDYFGEL+EESIRDNFVIIYEL+DETMDFGYPQ M+SKILRE+ITQ    E NR E APRPP+A+TNAVSWRSEGIKHRKNEIFLDV+E+LNLL + NGTVL+SEI+GA+KMKSFLSGMPELKLGLNDKL+FE++GR     KAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRL+THVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRS+ANNV+IIIPVP+DVDSP+FK+SIG+V YLPD++ +VWSIKQFNG++EYLMRAHFGLPS+S+ED   WKAPI+VKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM
Sbjct:    1 MTLSCIFVMDLKGRVIISRNYRGDVPMSVSERFVQYLQENDEMDQRPIFTDEGFTFAYTKHNNLFLMCVTKRNSNIALLLMYLYRLVTVFKDYFGELDEESIRDNFVIIYELMDETMDFGYPQAMDSKILREFITQ----ESNRHETAPRPPIAVTNAVSWRSEGIKHRKNEIFLDVIERLNLLVAGNGTVLNSEIIGAIKMKSFLSGMPELKLGLNDKLMFEATGRPMTRGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSVANNVDIIIPVPHDVDSPSFKSSIGTVTYLPDRNVIVWSIKQFNGAREYLMRAHFGLPSVSSEDPEHWKAPIEVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 423

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BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot
Match: W7U403_9STRA (Ap-1 complex subunit mu-1-like isoform 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U403_9STRA)

HSP 1 Score: 712 bits (1839), Expect = 5.940e-257
Identity = 360/436 (82.57%), Postives = 398/436 (91.28%), Query Frame = 0

Query:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTVNGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQASACEGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGR--SSGTK-KAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAE----DARE--WKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 427
            MVASALFIMDLKGKIIISRN+RGD+PMTVSE F+ ++QE+EE EQ+PIFT  G TF Y++YNNL L+S TKRNSNVALMLVYL +LVDVFK+YFGELEEESIRDNFVIIYEL+DETMDFGYPQT E+KILREYITQ    EGNRLEAAPRPPVALTN VSWRSEGIKHRKNEIFLDV+EKLNLL S+NGTVLHSEI+GA++MKSFLSGMPELKLGLNDKL+FE+SGR  S+ TK KA+ELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRL+T VKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNV+IIIPVP+DVD+P+FKASIG+V YLPD+DA+VW IKQF+G +EYLMRAHFGLPSI+AE    +A E  WK P+Q+KFEIPYFTVSGIQVRYLKIIEKSG+ ALPWVRYIT  GD  LRM
Sbjct:    1 MVASALFIMDLKGKIIISRNYRGDIPMTVSERFATYLQEKEESEQRPIFTEEGCTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQ----EGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIIGAIRMKSFLSGMPELKLGLNDKLMFEASGRAVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWGIKQFHGQREYLMRAHFGLPSIAAEGSSANATEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVYLRM 432

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BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot
Match: A0A7S2Y0S1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0S1_9STRA)

HSP 1 Score: 711 bits (1836), Expect = 1.220e-256
Identity = 348/429 (81.12%), Postives = 394/429 (91.84%), Query Frame = 0

Query:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTVNGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQASACEGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISA-EDAREWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT 428
            MVASA+FIMDLKGKIIISRNFRGD+PM++S+ F+ +IQ  EEME +PIFT +G+TF+Y++YNNL L++ TK+NSNV L+L+YLYKLV+VFKDYFGELEEESIRDNFVIIYELLDET+DFGYPQ ++SK+L+E+ITQ    EGNRLEAAPRPPV LTNAVSWRSEGIKHRKNEIFLDVVEKLNLL S+NGTVLHSEIVGA+KMKSFLSGMPELKLGLNDKLLF+++GR S   KAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRL THVKPLIWVEAVVEPHS SRIEYMIKAKSQFKSRS+ANNV+IIIPVP DVD+P+FKAS GSV YLP++D VVW IK F+G +E+LMRAHFGLPS+ A ED+ ++K PI+V FEIPYFTVSGIQVRYLKIIE+SGYQALPWVRYITQNG YQLRM+
Sbjct:    1 MVASAIFIMDLKGKIIISRNFRGDIPMSISDRFAQYIQNTEEMEARPIFTEDGITFIYIRYNNLYLLTVTKQNSNVGLILIYLYKLVEVFKDYFGELEEESIRDNFVIIYELLDETVDFGYPQALDSKVLKEFITQ----EGNRLEAAPRPPVQLTNAVSWRSEGIKHRKNEIFLDVVEKLNLLVSNNGTVLHSEIVGAIKMKSFLSGMPELKLGLNDKLLFDATGRGSSRGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLNTHVKPLIWVEAVVEPHSRSRIEYMIKAKSQFKSRSVANNVDIIIPVPGDVDTPSFKASTGSVTYLPERDVVVWHIKHFHGGREFLMRAHFGLPSVEADEDSAKFKKPIEVTFEIPYFTVSGIQVRYLKIIERSGYQALPWVRYITQNGSYQLRMS 425

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BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot
Match: A0A024TRG0_9STRA (MHD domain-containing protein n=23 Tax=Oomycota TaxID=4762 RepID=A0A024TRG0_9STRA)

HSP 1 Score: 702 bits (1813), Expect = 4.660e-253
Identity = 350/434 (80.65%), Postives = 396/434 (91.24%), Query Frame = 0

Query:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFT--VNGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQASACEGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTK-KAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDAR---EWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT 428
            MV SA+FI DLKGKIIISRN+RGD+PM+V+E F+ ++ E+++ EQ+P+FT   +G+TFVY++YNNL LM+ TK NSNVALML+YL ++  VF++YFGELEEESIRDNFVII+ELLDETMD GYPQT E++ILREYITQ    EG+R+E+APRPP ALTNAVSWRSEGIKHRKNEIFLDVVEKLNLL +SNGTVLHSEI+GAVKMKSFLSGMPELKLGLNDK+LFE++GRSS +K KAVE+EDIKFHQCVRLARFE DRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHS SRIEYM+K KSQFKSRSIANNVEI+IPVP DVDSP+FK SIGSV Y+PD+DA+VW+IKQFNGS+EYLMRAHFGLPSIS  +     EWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM+
Sbjct:    1 MVLSAVFITDLKGKIIISRNYRGDIPMSVAEKFTQYVTEKDDNEQRPVFTNEESGITFVYIKYNNLYLMTVTKVNSNVALMLMYLNRICQVFQEYFGELEEESIRDNFVIIFELLDETMDHGYPQTTEARILREYITQ----EGHRMESAPRPPTALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLVASNGTVLHSEILGAVKMKSFLSGMPELKLGLNDKMLFEATGRSSSSKGKAVEMEDIKFHQCVRLARFETDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSRSRIEYMVKTKSQFKSRSIANNVEIVIPVPPDVDSPSFKCSIGSVTYVPDRDAIVWTIKQFNGSREYLMRAHFGLPSISNTNTAATDEWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMS 430

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BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot
Match: K3X9E5_GLOUD (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=K3X9E5_GLOUD)

HSP 1 Score: 696 bits (1795), Expect = 2.050e-250
Identity = 338/428 (78.97%), Postives = 387/428 (90.42%), Query Frame = 0

Query:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTVNGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQASACEGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDAREWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT 428
            MV SA+FI DLKGK+IISRN+RGD+PM+    F++++QER++ EQ+P+FT +G TFVY+++NNL LM+ TK NSNVALM +YL ++  VF+DYFGELEEESIRDNFVII+ELLDET+D GYPQT E++ILREYITQ     G+R+EAAPRPP ALTNAVSWRSEGIKH+KNEIFLDVVEKLNLL SSNGTVLHSEI+GAVKM+S LSGMPELKLGLNDK LFE++GRS    KAVE+EDIKFHQCVRLARFE DRTISFIPPDGEFDLMTYRL+THVKPLIWVEAVVEPHS SRIEYM+KAKSQFK RS ANNVEI+IPVP DVDSP+FKAS+G V Y+PD+DA+VW+IKQFNGS+EYLMRAHFGLPS++ E+  +WKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM+
Sbjct:    1 MVLSAVFITDLKGKVIISRNYRGDIPMSACAKFTHYVQERDDSEQRPVFTEDGYTFVYLKHNNLYLMTVTKVNSNVALMFMYLTRICQVFQDYFGELEEESIRDNFVIIFELLDETIDHGYPQTTEARILREYITQT----GHRMEAAPRPPTALTNAVSWRSEGIKHKKNEIFLDVVEKLNLLVSSNGTVLHSEIIGAVKMRSNLSGMPELKLGLNDKALFEATGRSQSKGKAVEMEDIKFHQCVRLARFETDRTISFIPPDGEFDLMTYRLSTHVKPLIWVEAVVEPHSRSRIEYMVKAKSQFKPRSTANNVEIVIPVPPDVDSPSFKASVGVVTYVPDRDAIVWTIKQFNGSREYLMRAHFGLPSVNNEEVEDWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMS 424

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BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot
Match: A0A6V1S3S6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S3S6_HETAK)

HSP 1 Score: 687 bits (1773), Expect = 4.260e-247
Identity = 331/427 (77.52%), Postives = 387/427 (90.63%), Query Frame = 0

Query:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTVNGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQASACEGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDAREWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 427
            M ASA++I DLKGK+IISRN+RGDVPM  SE F+ ++ E +E++Q P+FT +G+T++YV+ +NL+L++ T+RN+N AL+L YLY LV  FKDYFGELEEESIRDNFVIIYEL+DETMDFGYPQ ++SK+LRE+ITQ    EGNRLEA P+PP  LTN VSWR EGIKHRKNE+FLDVVE+LNLL S+NGTVLHSEI+G VKMKSFLSGMPELKLGLNDKLLFE+SGRS+G  KAVE++DIKFHQCV+LARFENDRTISFIPPDGEFDLM+YRL T VKPLIWVE VVEPHSHSRIEYM+KAK+QFKSRS+ANNV+II+PVP DVDSP+FKAS+G+V YLPD+DAVVW +KQFNG +EYLMRAHFGLPSIS+ED+ + KAPI+VKFEIPYFTVSGIQVRYLKIIE+SGYQALPWVRYITQNG+YQLRM
Sbjct:    1 MTASAVYITDLKGKVIISRNYRGDVPMNASERFARYLGETDELDQHPVFTEDGITYMYVRVSNLLLLATTRRNANAALVLTYLYGLVQCFKDYFGELEEESIRDNFVIIYELMDETMDFGYPQVLDSKVLREFITQ----EGNRLEAKPKPPSTLTNTVSWRPEGIKHRKNEVFLDVVERLNLLVSANGTVLHSEILGVVKMKSFLSGMPELKLGLNDKLLFEASGRSTG--KAVEMQDIKFHQCVKLARFENDRTISFIPPDGEFDLMSYRLETTVKPLIWVETVVEPHSHSRIEYMVKAKAQFKSRSVANNVDIIVPVPGDVDSPSFKASVGTVTYLPDRDAVVWHLKQFNGGREYLMRAHFGLPSISSEDSEQVKAPIEVKFEIPYFTVSGIQVRYLKIIERSGYQALPWVRYITQNGNYQLRM 421

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BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot
Match: A0A7S4A236_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A236_9STRA)

HSP 1 Score: 687 bits (1772), Expect = 6.520e-247
Identity = 327/428 (76.40%), Postives = 386/428 (90.19%), Query Frame = 0

Query:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTVNGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQASACEGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDAREWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT 428
            M  S LF+ D KGK+II RN+RGD+P + SE F+ +IQ+++EM+Q+PIFT  G TF Y+++NNL L   T++NSNVAL L+ LY+L+ VFKDYFG L+EESIRDNFV+IYEL+DET+DFGYPQ++++KILRE+ITQ S    NR E APRPP+A+TNAVSWRSEGIKHRKNEIFLDV+EKLNLL S NG VL+SEI+GA++MKS+LSGMPELKLGLNDKL+FE++GRS    KAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTT VKPLIWVEAVVEPHSHSRIEYM+KAKSQFKSRS+AN+V+I+IPVP+DVDSP+FK+SIGSV+YLPD++ ++WSIKQFNG++EYLMRAHFGLPS+S E+   WKAPI+V+FEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT
Sbjct:    1 MAISCLFLTDAKGKVIIGRNYRGDIPTSTSERFAQYIQDKDEMDQRPIFTEGGCTFAYIKHNNLFLTCVTRKNSNVALALMTLYRLISVFKDYFGGLDEESIRDNFVVIYELMDETLDFGYPQSLDAKILREFITQKS----NRHEIAPRPPIAVTNAVSWRSEGIKHRKNEIFLDVIEKLNLLVSGNGGVLNSEIIGAIRMKSYLSGMPELKLGLNDKLMFEATGRSIARGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTQVKPLIWVEAVVEPHSHSRIEYMVKAKSQFKSRSVANSVDIVIPVPHDVDSPSFKSSIGSVSYLPDRNVIIWSIKQFNGAREYLMRAHFGLPSVSGENPDRWKAPIEVRFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMT 424

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot

BLAST of mRNA_C-linearis_contig85.16146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JE16_9PHAE	4.480e-305	99.07	MHD domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A835Z8U5_9STRA	5.060e-274	87.59	Clathrin assembly complex, medium subunit n=1 Tax=...	[more]
A0A7S2R9Z0_9STRA	3.750e-261	83.64	Hypothetical protein n=3 Tax=Dictyochophyceae TaxI...	[more]
F0YHG2_AURAN	1.010e-257	80.56	MHD domain-containing protein n=1 Tax=Aureococcus ...	[more]
W7U403_9STRA	5.940e-257	82.57	Ap-1 complex subunit mu-1-like isoform 1 n=2 Tax=M...	[more]
A0A7S2Y0S1_9STRA	1.220e-256	81.12	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A024TRG0_9STRA	4.660e-253	80.65	MHD domain-containing protein n=23 Tax=Oomycota Ta...	[more]
K3X9E5_GLOUD	2.050e-250	78.97	Uncharacterized protein n=26 Tax=Oomycota TaxID=47...	[more]
A0A6V1S3S6_HETAK	4.260e-247	77.52	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A7S4A236_9STRA	6.520e-247	76.40	Hypothetical protein n=3 Tax=Pelagomonas calceolat...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001392	Clathrin adaptor, mu subunit	PRINTS	PR00314	CLATHRINADPT	coord: 237..264 score: 77.27 coord: 346..357 score: 50.76 coord: 13..33 score: 42.86 coord: 99..126 score: 76.3 coord: 306..321 score: 58.52 coord: 161..189 score: 65.2
IPR001392	Clathrin adaptor, mu subunit	PIRSF	PIRSF005992	AP_complex_mu	coord: 2..428 e-value: 2.8E-142 score: 473.0
IPR028565	Mu homology domain	PFAM	PF00928	Adap_comp_sub	coord: 159..426 e-value: 1.6E-90 score: 303.1
IPR028565	Mu homology domain	PROSITE	PS51072	MHD	coord: 170..426 score: 45.287
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 5..125 e-value: 1.6E-6 score: 28.1
None	No IPR available	GENE3D	3.30.450.60		coord: 1..140 e-value: 7.1E-53 score: 180.2
None	No IPR available	GENE3D	2.60.40.1170		coord: 166..422 e-value: 2.2E-108 score: 363.4
None	No IPR available	GENE3D	2.60.40.1170		coord: 279..426 e-value: 2.2E-108 score: 363.4
None	No IPR available	PANTHER	PTHR10529	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED	coord: 1..427
None	No IPR available	PANTHER	PTHR10529:SF262	ADAPTOR PROTEIN COMPLEX 1, MU SUBUNIT	coord: 1..427
IPR018240	Clathrin adaptor, mu subunit, conserved site	PROSITE	PS00991	CLAT_ADAPTOR_M_2	coord: 257..271
IPR018240	Clathrin adaptor, mu subunit, conserved site	PROSITE	PS00990	CLAT_ADAPTOR_M_1	coord: 159..179
IPR036168	AP-2 complex subunit mu, C-terminal superfamily	SUPERFAMILY	49447	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	coord: 159..426
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 4..138

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig85	contig	C-linearis_contig85:89216..97029 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig85.16146.1	mRNA_C-linearis_contig85.16146.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig85 88285..97160 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig85.16146.1 ID=prot_C-linearis_contig85.16146.1|Name=mRNA_C-linearis_contig85.16146.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=429bp
MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFT
VNGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEE
SIRDNFVIIYELLDETMDFGYPQTMESKILREYITQASACEGNRLEAAPR
PPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAV
KMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLAR
FENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIK
AKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIK
QFNGSQEYLMRAHFGLPSISAEDAREWKAPIQVKFEIPYFTVSGIQVRYL
KIIEKSGYQALPWVRYITQNGDYQLRMT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001392	Clathrin_mu
IPR028565	MHD
IPR022775	AP_mu_sigma_su
IPR018240	Clathrin_mu_CS
IPR036168	AP2_Mu_C_sf
IPR011012	Longin-like_dom_sf