prot_C-linearis_contig84.16140.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig84.16140.1
Unique Nameprot_C-linearis_contig84.16140.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length270
Homology
BLAST of mRNA_C-linearis_contig84.16140.1 vs. uniprot
Match: D7G4S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4S9_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 6.910e-53
Identity = 94/104 (90.38%), Postives = 98/104 (94.23%), Query Frame = 0
Query:   83 KKRPRAPSWERDYQQIWKAVTDLGAEQFTGKEKKAYEARKIVERGGRAPVDPKMPYRMLMGLRKKAKQREEQRETMEAEAGVVTGNAGSARRKSAQTPRGHGGG 186
            +KRPRAPSWERDYQQIWKAVTDLG+EQFTGKEKKAYEARKIVERGGRAP DP+MPY ML GLRKKAKQREE+RE MEAEAGVVTGNAGSARRKSAQT RG GGG
Sbjct:   57 RKRPRAPSWERDYQQIWKAVTDLGSEQFTGKEKKAYEARKIVERGGRAPKDPRMPYVMLQGLRKKAKQREERREAMEAEAGVVTGNAGSARRKSAQTSRGRGGG 160          
BLAST of mRNA_C-linearis_contig84.16140.1 vs. uniprot
Match: A0A6H5JA53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA53_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 3.890e-36
Identity = 78/113 (69.03%), Postives = 84/113 (74.34%), Query Frame = 0
Query:   29 RGRKGHGFATSTGGVQVVEAPGAYSSAQTAKAK-RPKPKRTL-----------DDASDRADRDPTGKKRPRAPSWERDYQQIWKAVTDLGAEQFTGKEKKAYEARKIVERGGR 129
            R RKGHGF+TS GGVQVVEAPGAYSSAQ  K K RPKP++             D A+         +KRPRAPSWERDYQQIWKAVTDLG+EQFTGKEKKAYEARKIVERGGR
Sbjct:    4 RARKGHGFSTSAGGVQVVEAPGAYSSAQNLKEKNRPKPRKKARVDGGDVTKRYDGAAXXXXXXXXXRKRPRAPSWERDYQQIWKAVTDLGSEQFTGKEKKAYEARKIVERGGR 116          
BLAST of mRNA_C-linearis_contig84.16140.1 vs. uniprot
Match: K8Z355_NANGC (Uncharacterized protein (Fragment) n=4 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z355_NANGC)

HSP 1 Score: 80.1 bits (196), Expect = 2.240e-14
Identity = 57/152 (37.50%), Postives = 78/152 (51.32%), Query Frame = 0
Query:   94 DYQQIWKAVTDLGAEQFTGKEKKAYEARKIVERGGRAPVDPKMPYRMLMGLRKKAKQREEQRETMEAEAGVVTGNAGSARRKSAQTPRGHGGGGGRXXXXXXXXXXXXXXXXXXXXPAPSMGMMKSGVLHISRNTAPPGVRKRMSERDRMGG 245
            +++++WK+V DLGA Q TG EKKAY+AR+IVE GG+AP   K P+ +LMG R KAKQR+ +R+    E+GVV      +    A      GG                        P P +G MK G L ++R T     R  M++R   GG
Sbjct:   70 EFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQSAAALANQILDDGG-----------RRKHDSSGKIGETPYPVLGKMKGGTLFLNRGTI---QRATMAKRGGRGG 207          
BLAST of mRNA_C-linearis_contig84.16140.1 vs. uniprot
Match: A0A835Z9Y9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y9_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.930e-10
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0
Query:  102 VTDLGAEQFTGKEKKAYEARKIVERGGRAPVDPKMPYRMLMGLRKKAKQREEQRETMEAEAGVV 165
            V DLG  QFTGK+KK +EA KIV  GG+AP   KMPY++LMG+R KAK+RE +R   E E+G  
Sbjct:  427 VNDLGTAQFTGKQKKEHEAAKIVALGGQAPKAQKMPYKILMGMRNKAKEREAKRLQAEKESGAA 490          
BLAST of mRNA_C-linearis_contig84.16140.1 vs. uniprot
Match: L8H9C7_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H9C7_ACACA)

HSP 1 Score: 62.0 bits (149), Expect = 1.090e-7
Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 0
Query:   92 ERDYQQIWKAVTDLGAEQFTGK-EKKAYEARKIVERGGRAPVDPKMPYRMLMGLRKKAKQREEQRETMEAEAGV 164
            +R+ Q I + V DLGA QF  K +K+AYE RKI+  GG+A    K+PY +LMG++KK K+RE +R  ++ E G+
Sbjct:   90 DRELQAITREVLDLGATQFKRKKQKRAYEERKIISLGGQASKPDKVPYNILMGMKKKQKERELKRTELDKERGM 163          
BLAST of mRNA_C-linearis_contig84.16140.1 vs. uniprot
Match: A0A6G0W622_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W622_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.460e-7
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   94 DYQQIWKAVTDLGAEQFTGKEKKAYEARKIVERGGRAPVDPKMPYRMLMGLRKKAKQREEQRETMEAEAGVVTGNAGSARRKSAQTPR 181
            D+Q+    V D   +  TGK+KK  E  ++V  GG+AP   KMPY MLM ++KK  QR+  R+  +A +GVV G     ++ S + PR
Sbjct:   43 DFQKAVSEVRDFSMKNTTGKDKKKKEIERVVALGGKAPKQQKMPYNMLMAIKKKGAQRQNMRDE-QASSGVVLGK----KKSSNKVPR 125          
BLAST of mRNA_C-linearis_contig84.16140.1 vs. uniprot
Match: A0A7S2WUC7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUC7_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 5.090e-5
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 0
Query:   94 DYQQIWKAVTDLGAEQFTGKEKKAYEARKIVERGGRAPVDPKMPYRMLMGLRKKAKQREEQRETMEAEAGVV 165
            D ++ +++V D G   F G +K+  E  KIVE GG A  + KMPY+ML G+  K K+  + +E  + EAGVV
Sbjct:   23 DMKEAYRSVLDFGMSGFDGWQKRQIEDSKIVELGGSASKNRKMPYKMLTGILAKRKRVAQTKEKEDREAGVV 94          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G4S9_ECTSI6.910e-5390.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA53_9PHAE3.890e-3669.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K8Z355_NANGC2.240e-1437.50Uncharacterized protein (Fragment) n=4 Tax=Monodop... [more]
A0A835Z9Y9_9STRA3.930e-1057.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L8H9C7_ACACA1.090e-747.30Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A6G0W622_9STRA4.460e-739.77Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S2WUC7_9STRA5.090e-541.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..161
IPR027973Protein of unknown function DUF4602PFAMPF15375DUF4602coord: 58..177
e-value: 1.1E-16
score: 61.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:799387..806643 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16140.1mRNA_C-linearis_contig84.16140.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig84 799387..806643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig84.16140.1 ID=prot_C-linearis_contig84.16140.1|Name=mRNA_C-linearis_contig84.16140.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=270bp
SLPSSANSELRTRSSQLACATAVRSRMGRGRKGHGFATSTGGVQVVEAPG
AYSSAQTAKAKRPKPKRTLDDASDRADRDPTGKKRPRAPSWERDYQQIWK
AVTDLGAEQFTGKEKKAYEARKIVERGGRAPVDPKMPYRMLMGLRKKAKQ
REEQRETMEAEAGVVTGNAGSARRKSAQTPRGHGGGGGRGGGRSRGSGGD
RGGGSSSFGPAPSMGMMKSGVLHISRNTAPPGVRKRMSERDRMGGGRGSG
GAGGGGARRGRGGGGRGKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027973DUF4602