prot_C-linearis_contig84.16110.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig84.16110.1
Unique Nameprot_C-linearis_contig84.16110.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length329
Homology
[Close]
BLAST of mRNA_C-linearis_contig84.16110.1 vs. uniprot
Match: D8LPV7_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPV7_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 5.050e-131
Identity = 215/327 (65.75%), Postives = 247/327 (75.54%), Query Frame = 0 
Query:    1 MLSLVEAMTGPVIRSWHLRLPDPARGRREEVHKVQLRHFPLTGHS-RTITVDGIEVHGVEAEGQYDGGGSKGGGVTVKVRVGSHDCWVGFRAANRLGRYYYSCIVDGVVMPELNETVGDGGDDDGETIPLPGEVSVDSVGTAKDSVGTEFLEFRVVTRRXXXXXXXXXXXXXXXNGVARKEGGAGDRTSXXXXXXXXXXXXXXXGDDGGAHYAVVWRRFSAFRSLHNDVTSLLWGSHLLGCLPPLPGKPPCCINPLINQTGPAFVEKRRGVLQAYLRRMLEVPKARASVNLMGFLGLHPVTGSPLPWAASSPSAPRRLGPNIADEQR 326
            MLSL EAMTGP++R+WH+RLPDP+RGRREEVHKVQLRHFPLTGHS R++TVDGI V G E+     GGGS    VT+KVRVGSHDCWVG+RA+ R GRY+YSCI+DGVVMPELN+TVGD GDD+G  +PLPGEV +DS+  AKD  GTEFLEFRVVT R                G  R++              XXXXXXXXX    G ++AVVWRRFSAFRSLH+DVT++LWGSHLL  LPPLP K   CINPL+NQ G AF+E RR VLQAYLRR+LEVPKARASVNLMGFLGLHP+TG PLPWAA +PS PR+  P + DE R
Sbjct:    1 MLSLFEAMTGPMVRTWHMRLPDPSRGRREEVHKVQLRHFPLTGHSSRSVTVDGIAVQGAESA-PPPGGGSLKKTVTLKVRVGSHDCWVGYRASARPGRYFYSCIIDGVVMPELNDTVGDTGDDEG--VPLPGEVFIDSIEPAKDRFGTEFLEFRVVTLR----------------GTRRRDS-----------CGXXXXXXXXXXXXXGCYHAVVWRRFSAFRSLHSDVTAMLWGSHLLDSLPPLPAK---CINPLVNQMGAAFLESRREVLQAYLRRLLEVPKARASVNLMGFLGLHPITGYPLPWAALAPSTPRQAAP-LDDEGR 293
[Close]
BLAST of mRNA_C-linearis_contig84.16110.1 vs. uniprot
Match: A0A6U1LL59_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LL59_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.760e-9
Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 0 
Query:  210 HYAVVWRRFSAFRSLHNDVTSLLWGSHLLGCLPPLPGKPPCCINPLINQTGPAFVEKRRGVLQAYLRRMLEVPKARASVNLMGFLGL 296
            HY VV RRFS F  L N + S  W  HL   LP LP K    I  +I+ +   FVE+RR  L+AYL+R+++VP A ++ +L  FLG+
Sbjct:   17 HY-VVTRRFSDFDRLDNHIKSAFWRHHLRSNLPCLPAKK---IKYVIDHSQTDFVEQRRLDLEAYLKRLVQVPHASSNPDLHQFLGI 99
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPV7_ECTSI5.050e-13165.75PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6U1LL59_9STRA3.760e-944.83Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainPFAMPF00787PXcoord: 209..294
e-value: 1.5E-8
score: 34.6
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 130..301
score: 10.139
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 200..301
e-value: 3.8E-14
score: 54.5
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 211..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:464082..468644 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16110.1mRNA_C-linearis_contig84.16110.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig84 461770..468682 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig84.16110.1 ID=prot_C-linearis_contig84.16110.1|Name=mRNA_C-linearis_contig84.16110.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=329bp
MLSLVEAMTGPVIRSWHLRLPDPARGRREEVHKVQLRHFPLTGHSRTITV
DGIEVHGVEAEGQYDGGGSKGGGVTVKVRVGSHDCWVGFRAANRLGRYYY
SCIVDGVVMPELNETVGDGGDDDGETIPLPGEVSVDSVGTAKDSVGTEFL
EFRVVTRRGGRRRQSGGGGGGGGNGVARKEGGAGDRTSGSGRRSSGSVGS
GSGGDDGGAHYAVVWRRFSAFRSLHNDVTSLLWGSHLLGCLPPLPGKPPC
CINPLINQTGPAFVEKRRGVLQAYLRRMLEVPKARASVNLMGFLGLHPVT
GSPLPWAASSPSAPRRLGPNIADEQRWS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR036871PX_dom_sf