prot_C-linearis_contig83.16063.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig83.16063.1
Unique Nameprot_C-linearis_contig83.16063.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1319
Homology
BLAST of mRNA_C-linearis_contig83.16063.1 vs. uniprot
Match: D7G5H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H2_ECTSI)

HSP 1 Score: 723 bits (1865), Expect = 3.980e-243
Identity = 504/832 (60.58%), Postives = 549/832 (65.99%), Query Frame = 0
Query:  523 MTTTEIAFCAMRMYSHFRRTEGNYKRLTVMQNAENVPPVYEMIWQCDSVSEKNPKGGSRFFSSTDGTDAEQQKSLLACLLALSWDGSVSSRTTLQRALTPTKPSKVPAPEDIFWDEFKDNTDALSGDDEMVVVARVVLLIADSANKPGQDEASSKTD-----------GGKEDESGSIEHGDVMQALSGAHLREIGIAIKEARPGWQEAHVQLVSVLLVIAYLEEGAKNTLPGGKRPDPLSSLEWVTLLTPEALDAFLVEKLETRRALVELDLEPSGLVIKHDDDGEVERVEPAVVAEKKAPNLGSWIGSRGHQKILPKSSGRPDRKASSRKHRRHRSTESLGSGGGDTKPSPVVITTVLNRKASADGKDTRGVATASAPXXXXXXXXXXXXXXXXXXXXXXXXTERNSLRTIAQQRTPSSSGGPGAAAKTSRDAGVSAESGGGDFSSVPPKLTIDPDEFAVRVPAQGSSIRSELSRGMSPAGSQTSSVVTRVYAPSSAG--DQGDFSRGGASWAMEGSD------GRQSPGNESAMSQVSIAASRFNSSPTN-AFGAQLRAPSAGSFVPGATGLHKPASSTALTAHAVDDTNSCVGGRGGAAAMSAADSGSAIVPVGAAGTEMGFSQDLTGMT-----RGDSESRLRLPSNFSEVERSDAGFSDAASRYDGTPAFNQQ---------GSRSGGGSGARSN--PGGLVLEPATPISAAGSRFDTSSPGSAMTFTSRVGIGSPTAAAAGARGALHGGAGDGPFTGRSVASSMRSDGGSSFFKASSGSQRSADSRGGVGASATSVSSWDEEDLQNMGTRWLADRAYNQQFDERK 1318
            MTTTEIAFCAMRMYSHFRRTEGNYKRLTVMQNAENVPPVYE+IWQCD  SE NP+G SRFFSST GTDAEQQKSLLACLLALSWDGS SSR TLQRALTPT+PSKVP+PEDIFWDEFKD+TDALSGDDEMVVVAR+VLL+A+SANKPGQD  SS              GG+E E   IEHGD+MQALSGAHLREIGIAIKEARPGWQEAHVQ                                WV LLTPEALDAFLVEKLE RRALVELDLEPSGLVI+HDD G VERVEPAV  +K +    SW+ SRGHQ+ILPKSS R  RK   R HRR RS ES GS G  +KPSPVVITTV  RK                 XXXXXXXXXXXXXXXXXXXXXXXX                                           +VPPKLTID  +FAVRVP +G+S+RSELSRG+SPAGSQ SSVVTRVYAPSS G  DQ    R     A  G+D         SP NESAMSQVSIAASRF SSP N  FG Q R  SA               S+ LT               G +A +AA SGS +VPVGAA  +MG SQDL+G+T     RG  E   R P  FS   RS+AGFSDAASRYD + A +++         G  +G G+G       G  + +P++P SAA SRFDTSSP SA TFTSRVG+GSPTAA  GA G    GAG GP TGRS ASSMRSDGGSSFF+AS GSQRS DSRG  GA + S SSWDEEDLQNMGTRWLADRAYNQQFD +K
Sbjct:    1 MTTTEIAFCAMRMYSHFRRTEGNYKRLTVMQNAENVPPVYEIIWQCDGTSEGNPEGESRFFSSTSGTDAEQQKSLLACLLALSWDGSTSSRKTLQRALTPTRPSKVPSPEDIFWDEFKDSTDALSGDDEMVVVARMVLLVAESANKPGQDGVSSGASSSGVPPEATAGGGEEREKEGIEHGDIMQALSGAHLREIGIAIKEARPGWQEAHVQ--------------------------------WVNLLTPEALDAFLVEKLEARRALVELDLEPSGLVIRHDDHGVVERVEPAVEEKKTS----SWMPSRGHQQILPKSSSR-SRKG--RGHRRSRSVESGGSTG--SKPSPVVITTVHGRKDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------XXDTVPPKLTIDAGDFAVRVPVKGTSVRSELSRGLSPAGSQASSVVTRVYAPSSVGGGDQASVVR----VACVGADTPDVAQALASPTNESAMSQVSIAASRFLSSPVNNPFGPQFRGQSA---------------SSGLT---------------GVSAGTAAGSGSGVVPVGAARKDMGISQDLSGLTPTRTGRGG-EDGARSPGAFSVAGRSEAGFSDAASRYDNSFAASRESGVSLAGRVGLTTGAGAGGPPTRLDGLAIQQPSSPNSAAASRFDTSSPASATTFTSRVGVGSPTAAPVGAGGRARVGAG-GPLTGRSAASSMRSDGGSSFFRASGGSQRSGDSRGVGGAGSASASSWDEEDLQNMGTRWLADRAYNQQFDAQK 731          
BLAST of mRNA_C-linearis_contig83.16063.1 vs. uniprot
Match: A0A6H5KUU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU0_9PHAE)

HSP 1 Score: 487 bits (1254), Expect = 5.010e-153
Identity = 389/836 (46.53%), Postives = 452/836 (54.07%), Query Frame = 0
Query:   35 RALQLSSQGDTVVNGILNLFTTEGVAACEASCKGAFAAAFNVTESSIGCLCPDQEDGTARFRGRWRRRNLGEEED------SQDLGRDSTRSLRG-----LAELDTPAAGAFAARIPGGLDGGTAALEVFTASGPSAVASSFGLEESELAITTLTVTPPTSDDATETLTVITDFFDASDIPLLAPTAGS-GTDFAGGNRGVALFLAMLVLVLMT-CCCFFCVVLGLLWKI---GSGSVDKDVNLTG-----NSF--GTHPTIDGNPRR--PNSQSNACSTDGPALGVVAEESDDSSADSGRGKIVGGAGVTYEGDEAAGG--------SSSRAPVSSGPSLSNPNTDERDLKREV-SPGVGGTAAYMGGVVGAVGADGGQ--------GADDETKFPRNVSMEESGGTNPLYKSVAPLTASGSSSQAEQTATPGRSRLSTFLGNATPSRLRRLAGRMSTKSPGPSDCSQRSSSRNSRSGSSTRSRK-----HRRQGTFPGAYSQRNSSELDHQRPPADPVYTFMIKTIAAKGFKFMTTTEIAFCAMRMYSHFRRTEGNYKRLTVMQNAENVPPVYEMIWQCDSVSEKNPKGGSRFFSSTDGTDAEQQKSLLACLLALSWDGSVSSRTTLQRALTPTKPSKVPAPEDIFWDEFKDNTDALSGDDEMVVVARVVLLIADSANKPGQDEASSKTD-----------GGKEDESGSIEHGDVMQALSGAHLREIGIAIKEARPGWQEAHVQLVSVLLVIAYLEEGAKNTLPGGKRPDPLSSLEWVTLLTPEALDAFLVEKLETRRALVELDLEPSGLVIKHDDDGEVERVEPAVVAEKKA 812
            R+LQ+ + G+TV+NG+LNLFT EGVAACE SCKGAFA AF + E S+GC+CP     +   R   RR  +G+++        Q+ G    RSLRG     LAE ++    AF+AR+ GGL GG AAL + + SG SAVAS+FG++E EL I+TLTVTPP S ++T+TL VITD+FDASDI +++  + + GTD+AGG RGVALFLAM VL+LMT CCC F   L LLWK    G G+V  D          NSF  G  PT DGNPRR  P+S   A S +GP L +      DS A S R    G   V +EGDEA G         S+S A V+   S ++      D  +EV SP    +AA  GGV                  G D+E   PRNVSMEES GTNPLYK+VAP + S S SQ EQT  PGRSRLSTFLGNATPSRLRRLA R+  KSP  S  S+RS                    HRRQG+FPGAYSQRNSSELDHQRPPADPVYTFMIK                                                                                                                               D+TDALSGDDEMVVVAR+VLL+A+SANKPGQD  SS              GG+E E   IEHGD+MQALSGAHLREIGIAIKEARPGWQEAHVQ        A++                  SLEWV LLTPEALDAFLVEKLE RRALVELDLEPSGLVI+HDD G VERVEPAV  E+KA
Sbjct:   33 RSLQVLTDGETVLNGVLNLFTEEGVAACEGSCKGAFATAFGIDEVSVGCVCPMTTSASDADR---RRNLMGDDKQPTSDSAEQNNGSSDRRSLRGQRRRWLAETNSSEPVAFSARVAGGLAGGAAALNLLSDSGWSAVASAFGVDEDELEISTLTVTPPASTNSTDTLEVITDYFDASDISIVSSLSTTEGTDWAGGGRGVALFLAMFVLLLMTFCCCGFLAGL-LLWKAQKHGGGAVGADNFFKSRFPERNSFRWGDQPTADGNPRRSEPHSSEGA-SPNGPLLRLA-----DSQASSNRSS--GHESVPHEGDEAVGSGVDHRRATSTSSAAVAPESSSTSRGVSGGDRGKEVESP----SAAGTGGVTXXXXXXXXXXXXXXXXGGRDEEGAIPRNVSMEESVGTNPLYKTVAPYSRSTSESQPEQT--PGRSRLSTFLGNATPSRLRRLAARVG-KSPALSASSRRSKPSXXXXXXXXXXXXXXXXXHRRQGSFPGAYSQRNSSELDHQRPPADPVYTFMIK-------------------------------------------------------------------------------------------------------------------------------DSTDALSGDDEMVVVARMVLLVAESANKPGQDGVSSGASSSGVPPEATAGGGEEREKEGIEHGDIMQALSGAHLREIGIAIKEARPGWQEAHVQ--------AFV------------------SLEWVNLLTPEALDAFLVEKLEARRALVELDLEPSGLVIRHDDHGVVERVEPAV--EEKA 694          
BLAST of mRNA_C-linearis_contig83.16063.1 vs. uniprot
Match: D7G5H1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H1_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 6.490e-100
Identity = 266/528 (50.38%), Postives = 323/528 (61.17%), Query Frame = 0
Query:   35 RALQLSSQGDTVVNGILNLFTTEGVAACEASCKGAFAAAFNVTESSIGCLCPDQEDGTARFRGRWRRRNLGE-------EEDSQDLGRDSTRSLRG-----LAELDTPAAGAFAARIPGGLDGGTAALEVFTASGPSAVASSFGLEESELAITTLTVTPPTSDDATETLTVITDFFDASDIPLLAPTAGS-GTDFAGGNRGVALFLAMLVLVLMT-CCCFFCVVLGLLWKI---GSGSVDKDVNLTG-----NSF--GTHPTIDGNPRR--PNSQSNACSTDGPALGVVAEESDDSSADSGRGKIVGGAGVTYEGDEAAGG--------SSSRAPVSSGPSLSNPNTDERDLKREV-SPGVGGTAAYMGGVV--------GAVGADGGQGADDETKFPRNVSMEESGGTNPLYKSVAPLTASGSSSQAEQTATPGRSRLSTFLGNATPSRLRRLAGRMSTKSPGPSDCSQRSSSRNSRSGSSTRSRKHRRQ-----GTFPGAYSQRNSSELDHQRPPADPVYTFMIKT 514
            R+LQ+ + G+TV+NG+LNLFT EGVAACE SCK AFA AF + E S+GC+CP     +   R   RR  +G+       +   Q+ G    RSLR      LAE D+    AF+AR+ GGL GG AAL++ + SG SAVAS+FG++E EL I+TLTVTPP S ++TETL VITD+FDASDI +++  + + GTD+AGG RGVALFLAM VL+LMT CCC F   L LLWK    G G+V  +          NSF  G  PT DGNPRR  P+S   A S +GP LG+V  +S DSS      +      V +EGDEAAGG        S+S A V+   S  +      DL +E+ SP    +AA  GGV         GA  A  G G D+E   PRNVSMEES GTNPLYK+ AP   S + SQ+EQT  PGRSR STFLGNATPSRLRRLAGR++ KSP  S  S+R                         G+FPGAYSQRNSSELDHQRPPADPVYTFMIK+
Sbjct:   33 RSLQVLTDGETVLNGVLNLFTEEGVAACEGSCKDAFATAFGIDEVSVGCVCPISTSASDADR---RRNLMGDNSKQPTSDSAEQNKGSSDRRSLRAQRRRWLAETDSSEPVAFSARVAGGLAGGAAALDLLSESGWSAVASAFGVDEDELEISTLTVTPPASTNSTETLEVITDYFDASDISIVSSLSTTEGTDWAGGGRGVALFLAMFVLLLMTFCCCGFLAGL-LLWKAKKHGGGAVGGEKFFKSHLPERNSFRWGGQPTADGNPRRSEPHSSEGA-SPNGPLLGLV--DSQDSS-----NRSPSRENVPHEGDEAAGGVVDHVRATSASSAAVAPESSSKSRGVSSGDLGKELESP----SAAGRGGVTEQTAAAAAGAPAATAG-GRDEEGAIPRNVSMEESVGTNPLYKTAAPYRRSTNESQSEQT--PGRSRFSTFLGNATPSRLRRLAGRVA-KSPALSASSRRXXXXXXXXXXXXXXXXXXXXXXXXXGSFPGAYSQRNSSELDHQRPPADPVYTFMIKS 540          
BLAST of mRNA_C-linearis_contig83.16063.1 vs. uniprot
Match: A0A6H5KVJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ4_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 4.120e-90
Identity = 273/528 (51.70%), Postives = 305/528 (57.77%), Query Frame = 0
Query:  810 KKAPNLGSWIGSRGHQKILPKSSGRPDRKASSRKHRRHRSTESLGSGGGDTKPSPVVITTVLNRKASADGKDTRGVATASAPXXXXXXXXXXXXXXXXXXXXXXXXTERNSLRTIAQQRTPSSSGGPGAAAKTSRDAGVSAESGGGDFSSVPPKLTIDPDEFAVRVPAQGSSIRSELSRGMSPAGSQTSSVVTRVYAPSSAGDQGDFSRGGASWAMEGSDGRQSPGNESAMSQVSIAASRFNSSPT-NAFGAQLRAPSAGSFVPGATGLHKPASSTALTAHAVDDTNSCVGGRGGAAAMSAADSGSAIVPVGAAGTEMGFSQDLTGMTRG----DSESRLRLPSNFSEVERSDAGFSDAASRYDGT-PAFNQQGSRSGGGSGARSNPGGL-------------VLEPATPISAAGSRFDTSSPGSAMTFTSRVGIGSPTAAAAGARGALHGGAGDGPFTGRSVASSMRSDGGSSFFKASSGSQRSADSRGGVGASATSVSSWDEEDLQNMGTRWLADRAYNQQFDERK 1318
            K      SW+ SRGHQ+ILPKSS R  RK   R HRR RS ES  S G  +KPSPVVITTV  RK                 XXXXXXXXXXXXXXXXXXXXXXXX                                           +VPPKLTID  ++AVRVP +G+S+RSELSRG+SPAGSQ SSVVTRVYAPSS G  GD +R     +   +    SP NESAMSQVSIAASRF SSP  N FG Q                H  ++S+ LT               G +A +AA SGS +VPVGAA  +MG SQDL+GMT        E   R P  FS   RS+AGFSDAASRYD +  A  + G    G  G  +   G              +  P++P SAA SRFDTSSP SA TFTSRVG+GSPTAA AGA G    GAG GP TGRS ASSMRSDGGSSFF+AS GSQRS DSRG  G  + S SSWD+EDLQNMGTRWLADRAYNQQFD  K
Sbjct:   17 KNTQKTSSWMPSRGHQQILPKSSSR-SRKG--RGHRRSRSVESASSTG--SKPSPVVITTVHGRKDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------XXDNVPPKLTIDAGDYAVRVPVKGTSVRSELSRGLSPAGSQASSVVTRVYAPSSVGG-GDQAR-----SPNMAQTFASPTNESAMSQVSIAASRFLSSPVDNRFGPQF---------------HGQSASSGLT---------------GVSAGTAAGSGSGVVPVGAARKDMGISQDLSGMTPPRMGLGGEDGARSPGAFSVAGRSEAGFSDAASRYDNSFAASRESGVSLAGRVGLTAGTAGXXXXXPPTCLDALAIQHPSSPNSAAASRFDTSSPASATTFTSRVGLGSPTAAPAGAGGRARVGAG-GPLTGRSAASSMRSDGGSSFFRASGGSQRSGDSRGMGGTGSASASSWDDEDLQNMGTRWLADRAYNQQFDAHK 479          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig83.16063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G5H2_ECTSI3.980e-24360.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUU0_9PHAE5.010e-15346.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5H1_ECTSI6.490e-10050.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVJ4_9PHAE4.120e-9051.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..222
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 250..1318
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 223..249
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.646
NoneNo IPR availableTMHMMTMhelixcoord: 223..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig83contigC-linearis_contig83:561022..576327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig83.16063.1mRNA_C-linearis_contig83.16063.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig83 559819..576421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig83.16063.1 ID=prot_C-linearis_contig83.16063.1|Name=mRNA_C-linearis_contig83.16063.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1319bp
MPRLAQAWFIQALLGASSAADGGSSSRAVLDGSTRALQLSSQGDTVVNGI
LNLFTTEGVAACEASCKGAFAAAFNVTESSIGCLCPDQEDGTARFRGRWR
RRNLGEEEDSQDLGRDSTRSLRGLAELDTPAAGAFAARIPGGLDGGTAAL
EVFTASGPSAVASSFGLEESELAITTLTVTPPTSDDATETLTVITDFFDA
SDIPLLAPTAGSGTDFAGGNRGVALFLAMLVLVLMTCCCFFCVVLGLLWK
IGSGSVDKDVNLTGNSFGTHPTIDGNPRRPNSQSNACSTDGPALGVVAEE
SDDSSADSGRGKIVGGAGVTYEGDEAAGGSSSRAPVSSGPSLSNPNTDER
DLKREVSPGVGGTAAYMGGVVGAVGADGGQGADDETKFPRNVSMEESGGT
NPLYKSVAPLTASGSSSQAEQTATPGRSRLSTFLGNATPSRLRRLAGRMS
TKSPGPSDCSQRSSSRNSRSGSSTRSRKHRRQGTFPGAYSQRNSSELDHQ
RPPADPVYTFMIKTIAAKGFKFMTTTEIAFCAMRMYSHFRRTEGNYKRLT
VMQNAENVPPVYEMIWQCDSVSEKNPKGGSRFFSSTDGTDAEQQKSLLAC
LLALSWDGSVSSRTTLQRALTPTKPSKVPAPEDIFWDEFKDNTDALSGDD
EMVVVARVVLLIADSANKPGQDEASSKTDGGKEDESGSIEHGDVMQALSG
AHLREIGIAIKEARPGWQEAHVQLVSVLLVIAYLEEGAKNTLPGGKRPDP
LSSLEWVTLLTPEALDAFLVEKLETRRALVELDLEPSGLVIKHDDDGEVE
RVEPAVVAEKKAPNLGSWIGSRGHQKILPKSSGRPDRKASSRKHRRHRST
ESLGSGGGDTKPSPVVITTVLNRKASADGKDTRGVATASAPSASSAASDS
NSQAGGGGGGGAGSGTERNSLRTIAQQRTPSSSGGPGAAAKTSRDAGVSA
ESGGGDFSSVPPKLTIDPDEFAVRVPAQGSSIRSELSRGMSPAGSQTSSV
VTRVYAPSSAGDQGDFSRGGASWAMEGSDGRQSPGNESAMSQVSIAASRF
NSSPTNAFGAQLRAPSAGSFVPGATGLHKPASSTALTAHAVDDTNSCVGG
RGGAAAMSAADSGSAIVPVGAAGTEMGFSQDLTGMTRGDSESRLRLPSNF
SEVERSDAGFSDAASRYDGTPAFNQQGSRSGGGSGARSNPGGLVLEPATP
ISAAGSRFDTSSPGSAMTFTSRVGIGSPTAAAAGARGALHGGAGDGPFTG
RSVASSMRSDGGSSFFKASSGSQRSADSRGGVGASATSVSSWDEEDLQNM
GTRWLADRAYNQQFDERK*
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