prot_C-linearis_contig83.16060.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig83.16060.1
Unique Nameprot_C-linearis_contig83.16060.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length945
Homology
BLAST of mRNA_C-linearis_contig83.16060.1 vs. uniprot
Match: D7G5H7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H7_ECTSI)

HSP 1 Score: 1133 bits (2931), Expect = 0.000e+0
Identity = 621/908 (68.39%), Postives = 681/908 (75.00%), Query Frame = 0
Query:    2 MAEAPKELVSCSSVEVVSEGGTIDGSADLCLHPVEHADALLSAQEAQGPRHGIRAFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPSELARTSSLFDPERTCELSCKCLSLSCHSTLVRSMESSRNERV---PMTPGSXXXXXXX---DQSDDAAFHFGTQNTRHAPT---PPARKALNRLL-PFIPSRSHNPDLDLSESALPRRRKTTTTVNPMMKIFKSLPGGP--GADVDSTTRGHPGRVSHTIPAFWPPYIRVRTANVLVENGDAFAHHAFMSRDVDHPWWYSIKGIVMRNRHLDVKGLFSHSYASEVFKSRTQIVGFIENYVEDEYTEELEGMIKANKSLWGLSSGTSMDLGRGRRLSMFAIEEVDASVNIDPIDPPSAFRRVAVGEEFTEADALLPRPFSSVDIGHFLTVMQTKSIPALVCFSLPPALSDVKVFSGKQEPVSMVQYLSHPVFAEYEPNMPRVAGRSKPEPDRKSIVRSASAVGMTRGAKGVRWADQQVSKQEN-KVLDALACPNLEAFLDEVTNQRKRSGAVEWSAEGEEEADWIEAVVGQLRTAKKTASAIAKAKSAM----AAEAGSSMGFGGTGMQEREPGGEED---NLRDVPEW--------LRLLEACRLLSNDPTLLKSMVDAGERVAKRRKGDSTPGATPSRSHPNXXXXXXXXXXXXXXXXXXXTSGMRTPGGREIEEDEDELLRTYEEEALPLHWTDVEKLGKSDTLHDTAAVHALLCWVSVSQLYACMSAIALAGGADTPTSCFSDDAGPSSIEVYVVERQVLTFTGAAESEEHYAFHSLYKKTANGLSIYVTKEHSNQAAGVLWCYLKAMRVPVMICHLAECLMDRALGCRWDGS-ASEKLFRSAAVKEGAMHMGYVGELRPLSFLSAT 880
            MAEAPKELVSCSSVEVVSEGGTIDG+ADLCLHPVEHADALLSAQEAQGP+HGIRAFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSP+ELAR     D E+  E     L+ S   T+ RS E +   R    P+TPGS          D S+DAAF FGTQ    +PT    P R A NR +  F+PSR  + D+D+SE+ LPRRR+TTTTVNPMM +FK+L G    GAD+DS TRGHPG        FWPPYIRV TANVLVENGDAF HHAFMSRDVDHPWW+SIKGIVMRNRHLDVKGLFSHSYASEV+KSRTQ+V FIENYVEDE  ++LE MIK NKSLWGLS  TS DLGRGRRLSMFAIEEVDASVNIDPIDPP+AFRRV VGEEFTEADALLPRPFSSVDIGHFLTVMQTKSIPALVCFSLPPAL DVKVF  KQEP+SMVQYLSHPVFAEYEPNMPRVA     +  RKSIVRSASAV  +  +KGVRWADQ V KQE  KVLDAL CPNLEAFLDEVTN RKR+GAVEWSAEG+EEADWIEAV+ QLRTAKKTAS IAKA++A+    AA A    G G  G  +R     E+    LR+VPEW        LRLLEACRLLSND                                                                     DELLRTYEEEALPLHW DVEKLGKSDTLHD+AAVHA+ CWVSVSQ+YACMSA+A  GGA TP +  + +AGPS+I+VY VERQVLTFTGAAESEEHYAFHS+YKKT+ GL +YVTKEH NQAAGVLWCYLKAM VPVMICHLAECLMDRAL CRWD S AS +LF+ AA+KEG + +GY+G+LRPL+F+S T
Sbjct:    1 MAEAPKELVSCSSVEVVSEGGTIDGTADLCLHPVEHADALLSAQEAQGPKHGIRAFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPAELARLQEELDAEKGIENRLPMLTSSLSKTIPRSAEKNMKGRAGNGPLTPGSRGSRDSGGSRDLSEDAAFQFGTQAVSRSPTVQRSPPRAASNRWMHQFLPSRFRDTDVDVSETDLPRRRETTTTVNPMMNVFKALAGVALGGADMDSRTRGHPG--------FWPPYIRVHTANVLVENGDAFVHHAFMSRDVDHPWWFSIKGIVMRNRHLDVKGLFSHSYASEVYKSRTQVVTFIENYVEDENADDLESMIKTNKSLWGLSRDTSKDLGRGRRLSMFAIEEVDASVNIDPIDPPAAFRRVVVGEEFTEADALLPRPFSSVDIGHFLTVMQTKSIPALVCFSLPPALRDVKVFREKQEPISMVQYLSHPVFAEYEPNMPRVASAPGLDQSRKSIVRSASAVSPSARSKGVRWADQVVPKQEEQKVLDALECPNLEAFLDEVTNHRKRTGAVEWSAEGQEEADWIEAVLEQLRTAKKTASGIAKARNALTKNKAAAAAEQRGGGDGGFADRNVEEVEEALAKLREVPEWVTQQLPDLLRLLEACRLLSND---------------------------------------------------------------------DELLRTYEEEALPLHWADVEKLGKSDTLHDSAAVHAVSCWVSVSQVYACMSALASGGGAGTPNAQ-AREAGPSTIKVYDVERQVLTFTGAAESEEHYAFHSVYKKTSEGLVVYVTKEHKNQAAGVLWCYLKAMGVPVMICHLAECLMDRALDCRWDNSPASAELFKCAALKEGVVRLGYIGDLRPLTFISET 830          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig83.16060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5H7_ECTSI0.000e+068.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig83contigC-linearis_contig83:514354..530139 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig83.16060.1mRNA_C-linearis_contig83.16060.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig83 514344..530841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig83.16060.1 ID=prot_C-linearis_contig83.16060.1|Name=mRNA_C-linearis_contig83.16060.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=945bp
MMAEAPKELVSCSSVEVVSEGGTIDGSADLCLHPVEHADALLSAQEAQGP
RHGIRAFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPSE
LARTSSLFDPERTCELSCKCLSLSCHSTLVRSMESSRNERVPMTPGSRGS
RESQDQSDDAAFHFGTQNTRHAPTPPARKALNRLLPFIPSRSHNPDLDLS
ESALPRRRKTTTTVNPMMKIFKSLPGGPGADVDSTTRGHPGRVSHTIPAF
WPPYIRVRTANVLVENGDAFAHHAFMSRDVDHPWWYSIKGIVMRNRHLDV
KGLFSHSYASEVFKSRTQIVGFIENYVEDEYTEELEGMIKANKSLWGLSS
GTSMDLGRGRRLSMFAIEEVDASVNIDPIDPPSAFRRVAVGEEFTEADAL
LPRPFSSVDIGHFLTVMQTKSIPALVCFSLPPALSDVKVFSGKQEPVSMV
QYLSHPVFAEYEPNMPRVAGRSKPEPDRKSIVRSASAVGMTRGAKGVRWA
DQQVSKQENKVLDALACPNLEAFLDEVTNQRKRSGAVEWSAEGEEEADWI
EAVVGQLRTAKKTASAIAKAKSAMAAEAGSSMGFGGTGMQEREPGGEEDN
LRDVPEWLRLLEACRLLSNDPTLLKSMVDAGERVAKRRKGDSTPGATPSR
SHPNTPNRSRPNTPNRSRHNTLNTSGMRTPGGREIEEDEDELLRTYEEEA
LPLHWTDVEKLGKSDTLHDTAAVHALLCWVSVSQLYACMSAIALAGGADT
PTSCFSDDAGPSSIEVYVVERQVLTFTGAAESEEHYAFHSLYKKTANGLS
IYVTKEHSNQAAGVLWCYLKAMRVPVMICHLAECLMDRALGCRWDGSASE
KLFRSAAVKEGAMHMGYVGELRPLSFLSATCQNDIREMPILERACLLRML
AHGHGCIAEYSAAGPIGGILPHRVHLEAGIGPESQGHGKQSLPE*
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