prot_C-linearis_contig82.16032.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.16032.1
Unique Nameprot_C-linearis_contig82.16032.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length308
Homology
BLAST of mRNA_C-linearis_contig82.16032.1 vs. uniprot
Match: D7G7X4_ECTSI (BSD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7X4_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 4.350e-117
Identity = 185/247 (74.90%), Postives = 206/247 (83.40%), Query Frame = 0
Query:    1 MAGWFSSINLDQIGAQVSGLTQSIGESAAKMGEDLQQTVNTLAAFDLEDIGKAIQNAEEDITSEEAKIQRENAGLKQTEVKILPWETRIEKLAIMSPGLMEKILSLSLEESNFTTAPAGSEAKPEGSTGXXXXXXXXXXXXXXXXHERSTAATFQLDRHINVAMKMLSLDPNLAKIHARLISHMPEKTFWYHYFSRVAALRAEIDLEPLCEDLSKDTAGTTTSEEYDKVSHGDAQSMTSPSKTPNET 247
            MAGWFS++NLDQIGAQV+GLTQS+GESAAKMGEDLQQ VNTLAAFDLE+I KAIQNAE+DITS+EAKIQ+E+AGLKQ E+KILPWETRIEK+AI+S GLMEKILSLSLEESNFTT P  S  KPE                     +R+ AA FQLDRH +VA+KMLSLDPNLAKIHARLIS MPE+TFWYHYFSRVA LRAE+DLEPLCEDLSK+   TTTSEEYDK+SHGD QSMTSPS+  NET
Sbjct:    1 MAGWFSNMNLDQIGAQVTGLTQSLGESAAKMGEDLQQKVNTLAAFDLEEINKAIQNAEDDITSKEAKIQQEDAGLKQAEIKILPWETRIEKMAILSHGLMEKILSLSLEESNFTTPPLESGTKPE-----EISEDSALQGNGGADDDRNGAAAFQLDRHTSVAIKMLSLDPNLAKIHARLISRMPERTFWYHYFSRVATLRAEVDLEPLCEDLSKEHPETTTSEEYDKISHGDVQSMTSPSELANET 242          
BLAST of mRNA_C-linearis_contig82.16032.1 vs. uniprot
Match: A0A7S2SH86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH86_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 8.200e-18
Identity = 65/176 (36.93%), Postives = 87/176 (49.43%), Query Frame = 0
Query:   34 DLQQTVNTLAAFDLEDIGKAIQNAEEDITSEEAKIQRENAGLKQTEVKILPWETRIEKLAIMSPGLMEKILSLSLEESNFTTAPAGSEAKPEGSTGXXXXXXXXXXXXXXXXHERSTAATFQLDRHINVAMKMLSLDPNLAKIHARLISHMPEKTFWYHYFSRVAALRAEIDLEPL 209
            DLQ  V+  AA  +E +   I++A  ++  +EA   R    +   EV  LPWE   E  +I+   LMEKIL +SL E  FTT P  +                             T   F  DRH+ V M++L LDPNLAK+H RL S M E+ FW +YF R A LRAE+ L+ +
Sbjct:   18 DLQGIVDK-AAGGIEQLASGIKDAAAEV-HQEANFIRMQKNVSD-EVTALPWECDDESKSIVVEDLMEKILGISLNEETFTTEPTPA-----------------------------TEFIFSTDRHVQVIMRLLELDPNLAKMHYRLSSKMEEEEFWKNYFHRCALLRAEVGLDTM 161          
BLAST of mRNA_C-linearis_contig82.16032.1 vs. uniprot
Match: A0A836CPC6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPC6_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.690e-15
Identity = 65/217 (29.95%), Postives = 92/217 (42.40%), Query Frame = 0
Query:    1 MAGWFSSINLDQIGAQVSGLTQSIGESAAKMGEDLQQTVNTLAAFDLEDIGKAIQNAEEDITSEEAKIQRENA--------GLKQTEVKILPWETRIEKLAIMSPGLMEKILSLSLEESNFTTAPAGSEAKPEGSTGXXXXXXXXXXXXXXXXHERSTAATFQLDRHINVAMKMLSLDPNLAKIHARLISHMPEKTFWYHYFSRVAALRAEIDLEPL 209
            MAGWF   NLD I AQV+    +  ES +K   D+Q+ V  +                                            E+++LPWET+ E  +I+S  L+ K+ +LSLE + FT AP      P+ +                          F L  HI  AM+++ LD NLAK+HAR IS + E  FW +YF ++  LR    +EPL
Sbjct:    1 MAGWF---NLDSITAQVTAAAAAAQESVSKFASDVQENVQHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATAACEIRLLPWETQDESRSILSDDLLAKVFALSLESATFTEAPP-----PDANY------------------------AFDLTPHIACAMRLMDLDANLAKMHARYISKVGETAFWRNYFYKINVLRLAAGVEPL 185          
BLAST of mRNA_C-linearis_contig82.16032.1 vs. uniprot
Match: W7TUU7_9STRA (BSD domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUU7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.580e-9
Identity = 54/178 (30.34%), Postives = 83/178 (46.63%), Query Frame = 0
Query:   28 AAKMGEDLQQTVNTLAAFDLEDIGKAIQNAEEDITSEEAKIQRENAGL--KQTEVKILPWETRIEKLAIMSPGLMEKILSLSLEESNFTTAPAGSEAKPEGSTGXXXXXXXXXXXXXXXXHERSTAATFQLDRHINVAMKMLSLDPNLAKIHARLISH-MPEKTFWYHYFSRVAALRA 202
            A K+ E+  Q    L         +  + A ++I++EEA+I+  ++      + V +LPWE   E   I++  LME+IL++S +E+ F  AP  +E                         E      F L+ ++ V  ++LSLDP L K+HARL      EK FW  YF R A LR+
Sbjct:   61 AVKLKEEAVQAAQALH--------QVAEKAAQEISAEEARIKASSSAAVPPSSLVSLLPWEANDESQEILTQPLMEQILAISHDEATF--APLHAE-------------------------EEEQFGPFDLENYVTVITRLLSLDPALEKMHARLGGRGREEKEFWQSYFYRCACLRS 203          
BLAST of mRNA_C-linearis_contig82.16032.1 vs. uniprot
Match: A0A4D9CTI7_9STRA (BSD domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTI7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.420e-9
Identity = 54/178 (30.34%), Postives = 83/178 (46.63%), Query Frame = 0
Query:   28 AAKMGEDLQQTVNTLAAFDLEDIGKAIQNAEEDITSEEAKIQRENAGL--KQTEVKILPWETRIEKLAIMSPGLMEKILSLSLEESNFTTAPAGSEAKPEGSTGXXXXXXXXXXXXXXXXHERSTAATFQLDRHINVAMKMLSLDPNLAKIHARLISH-MPEKTFWYHYFSRVAALRA 202
            A K+ E+  Q    L         +  + A ++I++EEA+I+  ++      + V +LPWE   E   I++  LME+IL++S +E+ F  AP  +E                         E      F L+ ++ V  ++LSLDP L K+HARL      EK FW  YF R A LR+
Sbjct:   61 AVKLKEEAVQAAQALH--------QVAEKAAQEISAEEARIKASSSAAVPPSSLVSLLPWEANDESQEILTQPLMEQILAISHDETTF--APLHAE-------------------------EEEQFGPFDLENYVTVITRLLSLDPALEKMHARLGGRGREEKDFWQSYFYRCACLRS 203          
BLAST of mRNA_C-linearis_contig82.16032.1 vs. uniprot
Match: A0A7S1U6G6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6G6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.450e-7
Identity = 44/155 (28.39%), Postives = 71/155 (45.81%), Query Frame = 0
Query:   50 IGKAIQNAEEDITSEEAKIQRENAGLKQTEVKILPWETRIEKLAIMS-PGLMEKILSLSLEESNFTTAPAGSEAKPEGSTGXXXXXXXXXXXXXXXXHERSTAATFQLDRHINVAMKMLSLDPNLAKIHARLISHMPEKTFWYHYFSRVAALRAE 203
            + + ++ A+E++ SE A +  E+A   +   +++PWE   E  A+ + PGLMEK+L LSL  + F          P+                       S A+ F L   I V  ++L +DPNL  + AR    M E+ FW  YF +   L+ +
Sbjct:   29 VAEKVREAQENLDSEAAALAEEDAQAHKGGARLMPWERLDENDAVDAIPGLMEKVLGLSLASTTFQVD------VPD-----------------------SFASAFDLTAEIGVIERLLDIDPNLGAMQARYSGRMEEEKFWATYFYQCEKLKLD 154          
BLAST of mRNA_C-linearis_contig82.16032.1 vs. uniprot
Match: A0A7S2UVH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVH5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.290e-5
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:  154 FQLDRHINVAMKMLSLDPNLAKIHARLISHMPEKTFWYHYFSRVAALRAEIDLEPL 209
            F LD H+ + +++L +D NLAK+HA+L +   E+ FW +YF RV +LR E  LEPL
Sbjct:   14 FNLDAHVKMILRLLEVDHNLAKMHAKLGTDR-EQQFWQNYFWRVHSLREENGLEPL 68          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G7X4_ECTSI4.350e-11774.90BSD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2SH86_9STRA8.200e-1836.93Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836CPC6_9STRA1.690e-1529.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TUU7_9STRA1.580e-930.34BSD domain-containing protein n=2 Tax=Nannochlorop... [more]
A0A4D9CTI7_9STRA5.420e-930.34BSD domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S1U6G6_9STRA2.450e-728.39Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UVH5_9STRA3.290e-548.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..74
NoneNo IPR availablePANTHERPTHR16019:SF6SYNAPSE-ASSOCIATED PROTEIN 1coord: 19..287
NoneNo IPR availablePANTHERPTHR16019SYNAPSE-ASSOCIATED PROTEINcoord: 19..287
NoneNo IPR availableSUPERFAMILY140383BSD domain-likecoord: 98..206
IPR005607BSD domainSMARTSM00751wurzfinal6coord: 143..201
e-value: 3.6E-5
score: 33.2
IPR005607BSD domainPFAMPF03909BSDcoord: 154..204
e-value: 1.4E-8
score: 34.6
IPR005607BSD domainPROSITEPS50858BSDcoord: 150..201
score: 10.213
IPR035925BSD domain superfamilyGENE3D1.10.3970.10coord: 143..211
e-value: 7.5E-11
score: 43.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:791241..801326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16032.1mRNA_C-linearis_contig82.16032.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 791241..801415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.16032.1 ID=prot_C-linearis_contig82.16032.1|Name=mRNA_C-linearis_contig82.16032.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=308bp
MAGWFSSINLDQIGAQVSGLTQSIGESAAKMGEDLQQTVNTLAAFDLEDI
GKAIQNAEEDITSEEAKIQRENAGLKQTEVKILPWETRIEKLAIMSPGLM
EKILSLSLEESNFTTAPAGSEAKPEGSTGGAAAAAAAAAAASDDDHERST
AATFQLDRHINVAMKMLSLDPNLAKIHARLISHMPEKTFWYHYFSRVAAL
RAEIDLEPLCEDLSKDTAGTTTSEEYDKVSHGDAQSMTSPSKTPNETGQT
SGGDDGGVGGGTEESKDDDNDDDDYSDLGDLDDLDSDSDSSIDAALEAEI
AAELGEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005607BSD_dom
IPR035925BSD_dom_sf