prot_C-linearis_contig82.16015.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.16015.1
Unique Nameprot_C-linearis_contig82.16015.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length792
Homology
BLAST of mRNA_C-linearis_contig82.16015.1 vs. uniprot
Match: D7G991_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G991_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 1.580e-35
Identity = 71/105 (67.62%), Postives = 84/105 (80.00%), Query Frame = 0
Query:  434 RHQARHQEWSTKPALGKRVLVEFEGGSFYAGTINTSGDSEKDRNHSKGKWGVLFDDCTRDRFADGATDVMISNRSKPTEFSRELYDYYLRHQNGRKLLEGVKVVP 538
            RHQ R  EW+TKPA GKRV+VEFE G +Y GTI+T GDS KD  H+KG+WGVLFDDCT+DRF DGATDVM+SN+  P   S EL DYYL+  NGR+L+EGV+VVP
Sbjct:    3 RHQERLAEWNTKPAFGKRVMVEFEDGIYYPGTISTDGDSAKDIYHAKGRWGVLFDDCTKDRFHDGATDVMVSNQPSPRSISAELRDYYLKQANGRELMEGVEVVP 107          
BLAST of mRNA_C-linearis_contig82.16015.1 vs. uniprot
Match: D7FI19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI19_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 4.120e-15
Identity = 76/192 (39.58%), Postives = 97/192 (50.52%), Query Frame = 0
Query:   48 MADVVDECPPLAKLFEGGL--ERFQEVFQAPGGLLAGPGAGSRPGASDPQDH---------TKAPAGAKRKLIGGPVDIEGGGXXXXXXXXXXXXXXXXXXXXXXPPQKGVSWSEEGARGRRGTRDARSNIEAEAWPGLEQALKASKQDMA--ASAG-------GRGGSKGVGVRSRPADQKAKDESAKQKR 219
            MA V+DECPPLAKLFEGG   +RFQEVFQ P  +LA  GAG+   AS+ +D          TK  A       GG  D+ G                           +G          R+G R + S +EAEAWPGLE+ALK S++ +   A AG       G  G +G+G+R+RPA  +AKDESAK+ R
Sbjct:    1 MAVVIDECPPLAKLFEGGFLEKRFQEVFQVPSAVLARSGAGAE--ASEVRDAMSIALTRKGTKGAAATAGPNRGG--DLAGDAPEGARGGRGSASP------------RGXXXXXXXXXXRKGARGSGSGVEAEAWPGLEEALKESEKKVTPVAEAGPATAPVVGSSG-QGIGMRARPAGGEAKDESAKRIR 175          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G991_ECTSI1.580e-3567.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI19_ECTSI4.120e-1539.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:642024..648309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16015.1mRNA_C-linearis_contig82.16015.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 642024..650678 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.16015.1 ID=prot_C-linearis_contig82.16015.1|Name=mRNA_C-linearis_contig82.16015.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=792bp
MPRRAAKATPAGKHRDKDENGEGRGKQALTLPRAGDTARQIGMGFLKMAD
VVDECPPLAKLFEGGLERFQEVFQAPGGLLAGPGAGSRPGASDPQDHTKA
PAGAKRKLIGGPVDIEGGGGGGSGGAGGRGGATGAGGSGSSPPQKGVSWS
EEGARGRRGTRDARSNIEAEAWPGLEQALKASKQDMAASAGGRGGSKGVG
VRSRPADQKAKDESAKQKRKPSPPVPAAFGFPAAPPPRSAAVNALQRIAA
AGTPRKPTHLEPKSAAAGADGAAGFASAGGKNTNSQKEAGAEEGGGNKSE
TSITLAASRSVTAAAAGKKPTKGGPGGSRATPAPEVGGAHGDGASQGSGG
SGKLKGGGTALSELAGGPGKRCTTGEDMLSRLDARVFRFVEAGGCREEGC
ELRDEAHCHRGPGCDCTRNNDTYRWPSDREKIKRHQARHQEWSTKPALGK
RVLVEFEGGSFYAGTINTSGDSEKDRNHSKGKWGVLFDDCTRDRFADGAT
DVMISNRSKPTEFSRELYDYYLRHQNGRKLLEGVKVVPETKRDEAARVAG
ETEQQGAAGKASAHKEKGAGAGKHRRPKPWENNKPRKESPATDRDEVGGA
SGKLKHATAGEKLAGTGPEATSASEARTSGASGGKNKRKHSIASEDEETD
IELEEQETGATHRKGKGKSGGAADDGGGGVGDPGKKKGAGDSGGGCGGIT
TSSSKNSAGTTIKYKSNDPVGAVGTGSGDEDGYLMATVSAISKKPKTSGG
GHSSGVKNVSHKMASKAAKQKGGGGGGSGGGEGGGEDRGEDS
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