prot_C-linearis_contig82.15988.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.15988.1
Unique Nameprot_C-linearis_contig82.15988.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length525
Homology
BLAST of mRNA_C-linearis_contig82.15988.1 vs. uniprot
Match: B5LWL0_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWL0_9PHYC)

HSP 1 Score: 554 bits (1427), Expect = 8.420e-191
Identity = 284/513 (55.36%), Postives = 363/513 (70.76%), Query Frame = 0
Query:   18 GGTLYVAEESYDEFLGVYAAENKKRNKTLSFNELRSSKVFRMYFDVDILDKNRLGDEFLLMLSRNIQAALVKFFPGVDQESSKCVLCSTATKEKITRRFTKNGYHILLPFLNVTLEMALQLQFSVVRDLEGNLGKREVAVNPWCDVIDKAPYYNGLEMCGSVKSATCADCKGKKKNAKRKPVVKDIITKIRGLRRSLY-KRDDPSFDYSNVMTIEKDELKNEDLAELYSSYQEETGLYMCHRCGDKGTHLEDRFYMPVHVLDADGATNKSDLEYLNENMHEMMRWTSIRCRPSDEATGGYFVPAGYSSPTPDRATASLQIAGSFLERLSPGIYREAINLEMFANNALGIRTWKRKEILDSRALELITSHVRSFHPQYK------VFEVKKSKTASVQRSVAGKKTARKKRVKTNATAKALTNIVKANKVSSVTDRVLEMFSRVQVRVSGPGSTFCTNKGDEHTTSSVFFWISQDGMAQKCFSRKDAVGVNGKTCKEFRSDFKVISVELKKFLF 523
            GG LYVAEE YDEFLGVYA E  + N+TL+F+EL+S  VFRMYFD+D++D   L  +  + LS+ +   L KF+  +DQ+  KCV+C+T  K    +   KNG H++ PFLNVTLEMALQL+F+ VRDLE   G+R    NPWCDVIDKAPY+NGL+MCGSVK+ TC++C GKKKN ++KP V  I+  IR +RR  Y +RDDP FDYSNVM+IEKDE KNEDLAEL+S+YQ+ETG  +C  CGDKG HLEDRFYMP  VL  DG+  ++D+EYL +N HE MRWTSIR RPSD  T GY VP GY++P  +R T SLQI G+ L+  SPGIYREA+N E+F ++A GI+TWK  EI   + L LI   +R++   Y+       FE++ +K  +   SV    + R KR +  A +KAL N+  ANKV     RVLE+ +R+ VRV+G GS +C NKG EHT++S+FFWISQDG+A KCFSRKD +G +GK CK+FRS+ K IS  L   LF
Sbjct:   31 GGVLYVAEEYYDEFLGVYAREIDEGNRTLTFSELKSEGVFRMYFDIDMVDSRELSADDFVSLSQCVLETLRKFYIDIDQDLFKCVVCTTKPKPLSDKDTFKNGCHLIFPFLNVTLEMALQLRFAAVRDLETRFGRRSRDANPWCDVIDKAPYFNGLKMCGSVKTLTCSECGGKKKNVRKKPEVAAILRDIRNIRRKTYPRRDDPGFDYSNVMSIEKDEFKNEDLAELFSAYQDETGTLICPACGDKGWHLEDRFYMPAKVLHGDGSLAEADMEYLADNPHETMRWTSIRSRPSDRMTAGYTVPEGYTAPRTERPTNSLQILGAQLKSFSPGIYREAVNAEIFGSDAAGIKTWKGCEITAPKTLNLIAHEIRNYATVYQDLVVRQAFEMRVAKAVAT--SVVSSGSTRSKRGR--AGSKALENMAVANKVPGRERRVLEVVARIFVRVAGTGSLYCMNKGAEHTSNSIFFWISQDGIAHKCFSRKDVLGQSGKRCKDFRSELKPISPGLANALF 539          
BLAST of mRNA_C-linearis_contig82.15988.1 vs. uniprot
Match: Q6XM41_9PHYC (FirrV-1-A46 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM41_9PHYC)

HSP 1 Score: 446 bits (1147), Expect = 4.020e-148
Identity = 237/523 (45.32%), Postives = 330/523 (63.10%), Query Frame = 0
Query:   18 GGTLYVAEESYDEFLGVYAAENKKRNKTLSFNELRSSKVFRMYFDVDILDKNRLGDEFLLMLSRNIQAALVKFFPGVDQESSKCVLCSTATKEKITRRFTKNGYHILLPFLNVTLEMALQLQFSVVRDLEGNLGKREVAVNPWCDVIDKAPYYNGLEMCGSVKSATCADCKGKKKNAKRKPVVKDIITKIRGLRRSLYKRDDP-SFDYSNVMTIEKDELKNEDLAELYSSYQEETGLYMCHRCGDKGTHLE-DRFYMPVHVLDADGATNKSDLEYLNENMHEMMRWTSIRCRPSDEATGGYFVP----------AGYS---SPTPDRATASLQIAGSFLERLSPGIYREAINLEMFANNALGIRTWKRKEILDSRALELITSHVRSFHPQYKVFEVKKSKTASVQRSVAGKKTARKKRVKTNATAKALTNIVKANKVSSVTDRVLEMFSRVQVRVSGPGSTFCTNKGDEHTTSSVFFWISQDGMAQKCFSRKDAVGVNGKTCKEFRSDFKVISVELKKFLFTE 525
            GG LYV EE+YDEFLGVYA E    N+ L+F+EL+S  VFRMYFD+D+L+   L   + + L R++  A+ +++  V++++ KCV+C+T  K++    + KNG H++ P L V LE ALQL+F +V+ LE   G R++ +NPWCD+IDKAPYYNGL+MCGSVK+  C +CKG  +N   +P V +I+ +IR +RR  Y R+D  +FDYSNV  IEKDE K+E LAEL++ YQEETG  MC  CG++G +LE DRFYMP  VL+ DG++++ +LEYL++N HE MRWTSIRCRPSDE TGGY +           A Y        +     L   G  L  +SPG+YREA+N  +  N+A  IRTWK +EI D+  +E I + VR  H  YK  +V++     V ++V         R K       +  I + NKV     +V +    +  RVSGPG+++C NK  EH ++ ++FWI+ +G+ QKCFSRKDA+G     CK +RS    IS  LK  LF +
Sbjct:   31 GGVLYVPEENYDEFLGVYAREIDSGNRGLTFSELKSGDVFRMYFDIDMLETRELDLSYFVHLCRDMVRAMRQYYTDVEEDTFKCVVCTTKPKKRTQDEYIKNGCHVIFPSLRVNLETALQLRFFIVQALENTRGVRKIGINPWCDIIDKAPYYNGLKMCGSVKTIPCLECKGANRNITHRPEVVEIVRQIRNVRRKYYPRNDNLAFDYSNVFNIEKDEFKHETLAELFARYQEETGYLMCVACGNRGWYLEHDRFYMPAMVLNGDGSSSEGELEYLHDNPHEAMRWTSIRCRPSDEVTGGYTMSPDNVGQYLRYARYEHRGESVRNNTVTCLNKLGPELADMSPGMYREAVNGAIAGNDADVIRTWKGEEITDTDVIEAIQNDVRVIHSNYKQLQVRQVFHLGVGKTVKVNAFGEIARGKRKKVLLMMAGIAEKNKVDMADKQVEQDTMVIVARVSGPGASYCMNKNREHGSNHIYFWITPEGIYQKCFSRKDALG--SLPCKAYRSGCYKISRALKLKLFPQ 551          
BLAST of mRNA_C-linearis_contig82.15988.1 vs. uniprot
Match: D8LP78_ECTSI (EsV-1-45 n=2 Tax=root TaxID=1 RepID=D8LP78_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 1.840e-96
Identity = 185/504 (36.71%), Postives = 282/504 (55.95%), Query Frame = 0
Query:   18 GGTLYVAEESYDEFLGVYAAENKKRNKTLSFNELRSSKVFRMYFDVDILDKNRLGDEFLLMLSRNIQAALVKFFPGVDQESSK--CVLCSTATKEKITR----RFTKNGYHILLPFLNVTLEMALQLQFSVVRDLEGNLGKREVAVNPWCDVIDKAPYYNGLEMCGSVKSATCADCKGKKKNAKRKPVVKD----IITKIRGLRRSLYKRDDPSFDYSNVMTIEKDELKNEDLAELYSSYQEETGLYMCHRCGDKGTHLEDRFYMPVHVLDADGATNKSDLEYLNENMHEMMRWTSIRCRPSDEATGGYFVPAGYS-SPTPDRATASLQIAGSFLERLSPGIYREAINLEMFANNALGIRTWKRKEILDSRALELITSHVRS-FHPQYKVFEVKKSKTASVQRSVAGKKTARKKRVKTNATAKALTNIVKANKVSSVTDRVLEMFSRVQVRVSGPGSTFCTNKGDEHTTSSVFFWISQDGMAQKCFSRKDAVGVNGKTCKEFRS 509
            GG + V +E+YDEFL +YA E + +NKTLSF+ELRS  VF MYFDVD+L    LG      +   IQ+ +  ++ G DQ   +  CV+C T+ K+  +       TKNGYH + P L + L  ALQL++SVV +LE  LG R  ++NPW DVIDKAPY  GL+MCGS K   C DCK      K  P  KD    +++++  LR+ +Y R  P FDY+++  I  DE K+    + Y  Y + TG   C  C + G  +E R YMP  VLD  G  + S L+ L E+  E+M++TSIRC+  ++ T G+ +P G   +PT +        +   L  L   ++   +N +++ ++A  +R WK   + D+R L +I + +R+     Y   +++K   +++      KK A+    K N  +K +  +++A+  ++     + + +R  V V+G GSTFC NKG EH ++SV+F I+     Q+CFS+K  +   G TC E+RS
Sbjct:   25 GGVVSVPDENYDEFLQLYAEEVRSKNKTLSFSELRSDPVFCMYFDVDMLGTGVLGAAESSRIFSVIQSVIRSYYTG-DQNDDRFRCVVCDTSVKKVPSADGETMLTKNGYHAIFPNLRINLSQALQLRYSVVYELEKTLGPRTGSLNPWSDVIDKAPYTGGLKMCGSFKRVKCTDCK------KTDPTFKDKKKALLSEMAKLRKKIYPRQ-PGFDYTDLSDIHSDEFKDAVFGDKYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQEGEKETSGFTIPKGVPRAPTEENGANMRTFSSKSLTHLGSDMHAFTVNNDIYLSDAQTMRLWKGPRVEDARRLSVIETFLRNNVCSAYSSVQIRKVSESTI------KKVAQ----KPNGGSKMMNALIRAHAGTTPPSPDVALSNRYLVNVAGVGSTFCMNKGSEHASNSVYFIITATQCFQRCFSKKPEIRRGGTTCAEYRS 510          
BLAST of mRNA_C-linearis_contig82.15988.1 vs. uniprot
Match: A0A6H5KIA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA7_9PHAE)

HSP 1 Score: 288 bits (738), Expect = 2.380e-87
Identity = 168/473 (35.52%), Postives = 260/473 (54.97%), Query Frame = 0
Query:   18 GGTLYVAEESYDEFLGVYAAENKKRNKTLSFNELRSSKVFRMYFDVDILDKNRLGDEFLLMLSRNIQAALVKFFPGVDQESSK--CVLCSTATK----EKITRRFTKNGYHILLPFLNVTLEMALQLQFSVVRDLEGNLGKREVAVNPWCDVIDKAPYYNGLEMCGSVKSATCADCKGKKKNAKRKPVVKD----IITKIRGLRRSLYKRDDPSFDYSNVMTIEKDELKNEDLAELYSSYQEETGLYMCHRCGDKGTHLEDRFYMPVHVLDADGATNKSDLEYLNENMHEMMRWTSIRCRPSDEATGGYFVPAGY-SSPTPDRATASLQIAGSFLERLSPGIYREAINLEMFANNALGIRTWKRKEILDSRALELITSHVR-SFHPQYKVFEVKK-SKTASVQRSVAGKKTARKKRVKTNATAKALTNIVKANKVSSVTDRVLEMFSRVQVRVSGPGSTFCTNKGDEHTTSSV 477
            GG + V  E YDEFL +YA E + +NKT+SF+ELRS+  F MYFD+D+LD   L  E  L +   IQ  +  F+PG   ++ +  CV+C T  K    E   +  TK+GYHI LP L VT+E ALQ+++ VV +LE  LG R   +N W DVIDKAPY NGL+MCGS K   C D K      K  P  KD    +++ I  LRR +Y RD   F+YS++  ++ DE K+    ++Y  Y E TG   C  C + G  +E+R YMPV  LD  G T+ S ++ L +++ ++M++TSIRC+  +  T G+ +P G   +PT +        +   L  L   +    +N +++ ++A  +  WK   + D R L +I   +R S    Y   +++K  ++  +Q+ +           + +  +K + ++V A+  S      + + +R  V ++G GST+C NKG +HT++SV
Sbjct:   26 GGVVGVPHEQYDEFLRLYATEVESKNKTISFSELRSNPAFCMYFDIDLLDSKELSTEVGLRIYSLIQGVVRSFYPGSSGDTGRFQCVVCGTPPKRVDGEAGEKSLTKSGYHITLPNLRVTVEQALQIRYCVVYELEKTLGPRSDGLNAWSDVIDKAPYTNGLKMCGSFKRVKCTDYK------KTDPTFKDKKKALLSSIARLRRKIYPRD-RGFEYSDLADVQDDEFKDAMFGDMYGRYLELTGFNSCKTCLNTGKRIEERTYMPVLALDGSGDTDASLIDLLRDDLFKVMKYTSIRCKDGESETSGFVIPEGVPKAPTEENGANMRTFSSKKLTHLGSDVQAFTVNNDIYLSDAQTMHLWKGPRVEDERRLSVIEKFIRESVCEMYSSVQIRKVCESRLIQKVIP----------RASGGSKLINSLVGAHSGSIPPPPPVSVSNRYLVNIAGVGSTYCMNKGADHTSNSV 481          
BLAST of mRNA_C-linearis_contig82.15988.1 vs. uniprot
Match: A0A3T1CXP8_9VIRU (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii medusavirus TaxID=2080449 RepID=A0A3T1CXP8_9VIRU)

HSP 1 Score: 100 bits (249), Expect = 1.400e-18
Identity = 121/518 (23.36%), Postives = 203/518 (39.19%), Query Frame = 0
Query:   18 GGTLYVAEESYDEFLGVYAAENKKRNKTLSFNELRSSKVFRMYFDVDILDKNRLGDEFLLMLSRNIQAALVKFFPGVDQESSKCVLCSTATK-EKITRRFTKNGYHILLPFLNVTLEMALQLQFSVVRDLEGNLGKREVAVNPWCDVIDKAPYY-NGLEMCGSVKSATCADCKGKKKNAKRKPVVKDIITKIRGLRRSLYKRDDPSFDYSNVMTIEKDELKNEDLAELYSSYQEETGLYM--CHRCGDKGTHLEDRFYMPVHVLDADGATNKSDLEYLNENMHEMMRWTSIRCRPSDEATGGYFVPAGYSSPTPDRATASLQIAGSFLERLSPGIYREAINLEMFANNA-LGIRTWKRKEILDS-RALELITSHVRSFHPQYKVFEVKKSKTASVQRSVAGKKTARKKRVKTNATAKALTNIVKANKV--SSVTDRVLEMFSRVQVRVSGPGSTFCTNKGDEHTTSSVFFWISQDGMAQKCFSRKDAVG-VNGKTCKEF-RSDFKVISVELKKFLFTE 525
            GG LYV     +EF   +    K      S+   R + VF ++ D+D+ D      + L    R +Q  + + FP ++    + V+C      EK   R  K G H+  P + +T   AL ++ ++++ L    G+R +  NPW  V+D+A Y  NGL M GS K+  C +C+G  K A     +    T+   L R       P+         E+     +         Q +  +    C  C + G     R Y PV VLD  G  +  +L+ L ++   +    ++R  P+D  T                           +E   P   ++    +++   +   +R  +RK+     R    +T     + P              V++S+ G +          A A  +  +  AN       T   +E  S     ++     +C NKGDEHT+S+++F +    +   CFSR  AV  + G  C++  R D     VELK+ LF +
Sbjct:  252 GGVLYVPASRQNEFRYHFL---KDLRVAPSYIGERRTAVFPLFGDLDMSDLEIPSQDRLDEYYRCMQEVVAELFPDLNDYERRMVICQAPISFEKPRSRRYKTGVHVYWPGVMLTATFALVVRKAIIKKLRERFGERPLPDNPWVKVLDEAVYTSNGLRMFGSFKADKCRECRGAGKVA-----IAQSQTQSTVLLRKQPNEVHPALKGQTKFDTERTAESEQXXXXXXXXXQSDANVPKEPCGLCLETGKTHVGRLYEPVLVLDGSGEPDDDELQNLKDDAEALYDACTLR-HPTDTPT---------------------------VEPAMPEWLKDVKESDLYDGPSDEELRRLRRKDQTGIVRKGARLTPRDADYRP--------------VKQSLRGNEV--------KARAMLMDALTTANDYMRGGPTITRIEYESTGNYYIAKTDCKWCPNKGDEHTSSTIWFRVGYHTITTHCFSRLPAVRPIGGCACRDMERFDAFGTPVELKELLFPD 711          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.15988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
B5LWL0_9PHYC8.420e-19155.36Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XM41_9PHYC4.020e-14845.32FirrV-1-A46 n=1 Tax=Feldmannia irregularis virus a... [more]
D8LP78_ECTSI1.840e-9636.71EsV-1-45 n=2 Tax=root TaxID=1 RepID=D8LP78_ECTSI[more]
A0A6H5KIA7_9PHAE2.380e-8735.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3T1CXP8_9VIRU1.400e-1823.36Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 230..250
NoneNo IPR availablePFAMPF03121Herpes_UL52coord: 453..509
e-value: 9.6E-6
score: 25.5
IPR040562Prim-pol 4PFAMPF18188PPL4coord: 24..142
e-value: 6.7E-6
score: 26.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:317724..319442 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.15988.1mRNA_C-linearis_contig82.15988.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 317696..319442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.15988.1 ID=prot_C-linearis_contig82.15988.1|Name=mRNA_C-linearis_contig82.15988.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=525bp
MVSSTTRRILPDTPSCPGGTLYVAEESYDEFLGVYAAENKKRNKTLSFNE
LRSSKVFRMYFDVDILDKNRLGDEFLLMLSRNIQAALVKFFPGVDQESSK
CVLCSTATKEKITRRFTKNGYHILLPFLNVTLEMALQLQFSVVRDLEGNL
GKREVAVNPWCDVIDKAPYYNGLEMCGSVKSATCADCKGKKKNAKRKPVV
KDIITKIRGLRRSLYKRDDPSFDYSNVMTIEKDELKNEDLAELYSSYQEE
TGLYMCHRCGDKGTHLEDRFYMPVHVLDADGATNKSDLEYLNENMHEMMR
WTSIRCRPSDEATGGYFVPAGYSSPTPDRATASLQIAGSFLERLSPGIYR
EAINLEMFANNALGIRTWKRKEILDSRALELITSHVRSFHPQYKVFEVKK
SKTASVQRSVAGKKTARKKRVKTNATAKALTNIVKANKVSSVTDRVLEMF
SRVQVRVSGPGSTFCTNKGDEHTTSSVFFWISQDGMAQKCFSRKDAVGVN
GKTCKEFRSDFKVISVELKKFLFTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040562PPL4