prot_C-linearis_contig81.15955.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig81.15955.1
Unique Nameprot_C-linearis_contig81.15955.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length651
Homology
BLAST of mRNA_C-linearis_contig81.15955.1 vs. uniprot
Match: D8LMA3_ECTSI (FtsJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA3_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 4.110e-152
Identity = 295/537 (54.93%), Postives = 336/537 (62.57%), Query Frame = 0
Query:  119 GVARSGTSRYRQKLALLEARDPEEFSRRCVSDPSLCRSLLRVYLLGGGVSTSLEDAGKAISEAVAAGKFPGGSLLAEGDGAAVADPALGASAAAPGDAAVSPPRPPLRVRVQALPKVCVAEKVESRRGSSRKVMERQLIDEDSTFWEINFPNLKRERQVGAFTHVLSVVFARGTYLWGLAEAATHGRSIIENNTEDTAVCRAFYKITEVYSRAELSFGEHWTAMDIGAAPGGWTSFLASKCRRVLSVDPAELDPAVLALPNVVHVRQVIQAATGVLHGLLSEASSPQTSKSAGGGRGQEVVDDTANRRGESDGVSGSISICPSSPNXXXXXXXXXXAAVGSVVSPGAAGRARAVPGTSVVPTDAGN--GAELVVSDMNAEPTVVADVLLSAMAAGLARPGAVLVATFKDFCGRHKKMRDEVVSAVARLQAGTAAGVVVVGGCEGV-DADGAKEAGDSAGSGSTSGSNEVVASTAA-AGTGCPQGGGGKAXAEGGVGGVCCTPPVAGTGGWWRLEGIQTMKLLAGGQTEVTIIARVAY 651
            G ARSGTSRYRQKLALLEARDP+EFSRRCVSDPSLCRSLLRVYLLGGG+ TSLED GKA                                                                         VME QLIDE++TFW+ NFPNL RERQ GAFTHVLS+VFARG +LWGLA+AATHGRSII+NN EDTAVCRA+YKI EV SRA+LSFGE WTA+DIGAAPGGWTSFLASKCRRVLSVDPAELD AVLALPNVVHV+++I+AA G L  LL+E  +P   + + GG G+E   D    R     +SG  S  P + +            + S  S   AG A ++ G +  PT  G   GAELVVSDMNAEP VVADVLLSAM+AGLARPGA+LVATFKDFCGR K+M+DEV  AV RL+ GT    VV GG  GV + DG   A    G    +G++   A     AG G    G      EG V GV C     G  GWWRLEGI+TMKLLAGG+ EVTI+ARVA+
Sbjct:    2 GTARSGTSRYRQKLALLEARDPQEFSRRCVSDPSLCRSLLRVYLLGGGLCTSLEDVGKA-------------------------------------------------------------------------VMEMQLIDEETTFWDENFPNLSRERQAGAFTHVLSLVFARGAFLWGLAQAATHGRSIIDNNNEDTAVCRAYYKIKEVTSRADLSFGEDWTAIDIGAAPGGWTSFLASKCRRVLSVDPAELDSAVLALPNVVHVQKLIEAAKGTLLDLLAE-DAPAHERESRGGEGEER--DDGGGRTHDGRLSGGGSFTPEASSLGSRLTPGGP--IASAGSADTAGEASSM-GANDRPTAPGKSQGAELVVSDMNAEPAVVADVLLSAMSAGLARPGALLVATFKDFCGRRKRMKDEVALAVERLRVGT---FVVGGGASGVGEGDGGPAAAPCGGGPPNAGTSGNDADGGLEAGNGLSHAG---TPPEGRVAGVACEKE--GAEGWWRLEGIETMKLLAGGRAEVTIVARVAH 451          
BLAST of mRNA_C-linearis_contig81.15955.1 vs. uniprot
Match: A0A6H5JTM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM6_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 2.830e-94
Identity = 159/270 (58.89%), Postives = 175/270 (64.81%), Query Frame = 0
Query:   36 MVHAPKHTLPPCETHRFWTEDPWARPACEWGEDCTWPHPKPKGAEDPELLRTNIALQTENSQISRVREYAVTVLGKGGAATATGVARSGTSRYRQKLALLEARDPEEFSRRCVSDPSLCRSLLRVYLLGGGVSTSLEDAGKAISEAVAAGKFPGGSLLAEGDGAAVADPALGASAAAPGDAAVSPPRPPLRVRVQALPKVCVAEKVESRRGSSRKVMERQLIDEDSTFWEINFPNLKRERQVGAFTHVLSVVFARGTYLWGLAEAATHGR 305
            MVH  K+TL  C+TH FW EDPW+RPACEWGEDCT+PHPKP+G EDP LLRTN+ALQTE+SQ+SRVR YA  VLGKGG A+ TG ARSGTSRYRQKLALLEARDP+EFSRRCVSDPSLCRSLLRVYLLGGG+  SLED GKA                                                                         VME QLIDE++TFW+ NFPNL RERQ GAFTHVLS+VFARG +LWGLAEAATHGR
Sbjct:    1 MVHVAKNTLAACQTHLFWLEDPWSRPACEWGEDCTFPHPKPEGPEDPGLLRTNVALQTESSQLSRVRAYASGVLGKGGEASDTGTARSGTSRYRQKLALLEARDPQEFSRRCVSDPSLCRSLLRVYLLGGGLCASLEDVGKA-------------------------------------------------------------------------VMEMQLIDEETTFWDDNFPNLSRERQAGAFTHVLSLVFARGAFLWGLAEAATHGR 197          
BLAST of mRNA_C-linearis_contig81.15955.1 vs. uniprot
Match: A0A6H5JWK0_9PHAE (FtsJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK0_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 1.160e-68
Identity = 171/325 (52.62%), Postives = 195/325 (60.00%), Query Frame = 0
Query:  340 TAMDIGAAPGGWTSFLASKCRRVLSVDPAELDPAVLALPNVVHVRQVIQAATGVLHGLLSEASSPQTSKSAGGGRGQEVVDDTANRRGESDGVSGSISICPSSPNXXXXXXXXXXAAVGSV------VSPGAAGRARAVPGTSVVPTDAGNGAELVVSDMNAEPTVVADVLLSAMAAGLARPGAVLVATFKDFCGRHKKMRDEVVSAVARLQAGTAAGVVVVGGCEGVDADGAKEAGDSAGSG----STSGSNE---VVASTAAAGTGCPQGGGGKAXAEGGVGGVCCTPPVAGTGGWWRLEGIQTMKLLAGGQTEVTIIARVAY 651
            T +DIGAAPGGWTSFLASKCRRVLSVDPAELDPAVLALPNVVHV+Q+I+AA G LH LL+E  +P   +  G G G+E  DD   R  +     G  S    S            A+ GS        S GA GR  A PG          GAELVVSDMNAEP VVADVLLSAM+AGLARPGA+LVATFKDFCGR K+M+DEV  AV RL+ GTA   +V GG  GV            G G     TSG++    +      +  G P         EG V GV C    AG  GWWRLE I+TMKLLAGG+ EVTI+ARVA+
Sbjct:   27 TQIDIGAAPGGWTSFLASKCRRVLSVDPAELDPAVLALPNVVHVQQLIEAAEGTLHELLAE-DAPTHERECGCGEGEER-DDGGGRTHDGRNSGGGSSTPEQSSLASRLTPGGPVASAGSADTADEASSMGANGRP-AAPGKR-------GGAELVVSDMNAEPAVVADVLLSAMSAGLARPGALLVATFKDFCGRRKRMKDEVAVAVERLRVGTA---IVDGGASGVGXXXXXXXXXXCGGGPPNAETSGNDADEGLEPGNGLSHAGTPP--------EGRVAGVACEKEGAGEEGWWRLEEIETMKLLAGGRAEVTIVARVAH 330          
BLAST of mRNA_C-linearis_contig81.15955.1 vs. uniprot
Match: A0A835YXR4_9STRA (FtsJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.330e-18
Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 0
Query:  280 FTHVLSVVFARGTYLWGLAEAATHGRSIIENNTEDTAVCRAFYKITEVYSRAELSFGEHWTAMDIGAAPGGWTSFLASKCRRVLSVDPAELDPAVLALPNVVHVRQVIQAAT 391
            F  V SVV+ +G +  G+   A     I+  + +  A CRAFYK+ E   RA +++ ++W A+D+GA+PGGWT FL+ +  RV +VDP  +D  VLALPNV ++R  +QAA+
Sbjct:  318 FELVASVVYTQGLFFAGVVPRAAWPGDIVAASIDAHAPCRAFYKLREATDRAGIAYQQNWNALDMGASPGGWTHFLSPRVARVFAVDPGSMDADVLALPNVTYLRAKVQAAS 429          
BLAST of mRNA_C-linearis_contig81.15955.1 vs. uniprot
Match: L8GJZ6_ACACA (Ribosomal RNA large subunit methyltransferase J, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GJZ6_ACACA)

HSP 1 Score: 83.2 bits (204), Expect = 3.060e-13
Identity = 45/113 (39.82%), Postives = 71/113 (62.83%), Query Frame = 0
Query:  280 FTHVLSVVFARGTYLWGLAEAATH-GRSIIENNTEDTAVCRAFYKITEVYSRAE---LSFGEHWTAMDIGAAPGGWTSFLASKCRRVLSVDPAELDPAVLALPNVVHVRQVIQ 388
            FTHVLS+   RG Y +GLA      G     ++ +   V RA++K+ EV++R +   L+    WTA+D+GAAPGGWT +L+   ++V+S+DP EL   +   PNVVH+++ ++
Sbjct:  214 FTHVLSIARERGRYYYGLAPKELFWGPESGVHSVQMDKVSRAYHKMKEVFTRIDCLRLADTAQWTAIDVGAAPGGWTQYLSPLMKQVISIDPGEL--RIELPPNVVHLKKKVE 324          
BLAST of mRNA_C-linearis_contig81.15955.1 vs. uniprot
Match: UPI00047077F6 (SAM-dependent methyltransferase n=2 Tax=Paenibacillus massiliensis TaxID=225917 RepID=UPI00047077F6)

HSP 1 Score: 78.2 bits (191), Expect = 7.620e-12
Identity = 51/160 (31.87%), Postives = 84/160 (52.50%), Query Frame = 0
Query:  246 GSSRKVMERQLI-----DEDSTFWEINFPNLKR-----------ERQVGAFTHVLSVVFARGTYLWGLAEAATH----GRSIIENNTEDTAVCRAFYKITEVYSRAELSFGEHWTAMDIGAAPGGWTSFLASKCRRVLSVDPAELDPAVLALPNVVHVRQ 385
            G  +K+  R++       +DST+W  +   LK+           E  V    ++LSV+     +  GL+E A +        I    E+  V RA +K+ E   +  + F  +  A+DIGAAPGGWTSFL  +  +V +VDPA++DP V+++PN+ ++R+
Sbjct:  102 GQHKKLQGRRISIQVRKTKDSTYWAESAGALKQAITDRLSELQAEFTVREADYILSVLADGPVWYAGLSEPADNLSDWNGGAIRFQKEEGQVSRAKFKLLEAAEQFGIDFTAYRNALDIGAAPGGWTSFLLERGVKVTAVDPAKMDPTVMSMPNLTYLRK 261          
BLAST of mRNA_C-linearis_contig81.15955.1 vs. uniprot
Match: A0A7S4B2L4_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B2L4_CHRCT)

HSP 1 Score: 78.2 bits (191), Expect = 1.970e-11
Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 0
Query:  299 EAATHGRSIIENNTEDTA-VCRAFYKITEVYSRAELSFGEHWTAMDIGAAPGGWTSFLASK-CRRVLSVDPAELDPAVLALPNVVHVRQVIQAATGVLHGLL 398
            EAA H  S      + +A VCRA+YK+ E+ SR  ++F +   A+D+GA+PGGWTS+LA + C +++++DPAEL       P V H+RQ +Q A   L GLL
Sbjct:  345 EAAAHNDSAATRMRQTSAPVCRAYYKLKELGSRELVAFSDCSVAIDVGASPGGWTSYLAERGCSKIIAIDPAELRQTEPPPPCVEHLRQKLQDA---LPGLL 443          
BLAST of mRNA_C-linearis_contig81.15955.1 vs. uniprot
Match: A0A5J4YAH7_9CHLO (Glycerophosphocholine acyltransferase 1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YAH7_9CHLO)

HSP 1 Score: 77.4 bits (189), Expect = 4.530e-11
Identity = 46/120 (38.33%), Postives = 67/120 (55.83%), Query Frame = 0
Query:  280 FTHVLSVVFARGTYLWGLAEA-ATHGRSIIENNTEDTAVCRAFYKITEVYSRAELSFGEHWTAMDIGAAPGGWTSFLASKCRRVLSVDPAELDPAVLALPNVVHVRQVIQAATGVLHGLL 398
            F +VL+VV   GT LW L EA  T+ R+ +   +    V  A +K+ E         G +  A+D+GAAPGGW+ +LA     V++VDPA+L P  L+LPNV H++   + A   +  LL
Sbjct:   81 FQYVLNVVANEGTLLWNLHEADGTYRRTTLLTESPQKCVSSAVHKLEEALHVVGHHVGSNQRAIDLGAAPGGWSLYLAKHVAMVIAVDPADLSPQ-LSLPNVHHLQCKSEVAGDAIETLL 199          
BLAST of mRNA_C-linearis_contig81.15955.1 vs. uniprot
Match: A0A2T0UPL3_9ACTN (23S rRNA (Cytidine2498-2'-O)-methyltransferase n=2 Tax=Glycomyces artemisiae TaxID=1076443 RepID=A0A2T0UPL3_9ACTN)

HSP 1 Score: 73.6 bits (179), Expect = 2.250e-10
Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 0
Query:  317 VCRAFYKITEVYSRAELSFGEHWTAMDIGAAPGGWTSFLASKCRRVLSVDPAELDPAVLALPNVVHVR 384
            V RA +K+ E++    L FG   TA+D GAAPGGWT  LA +  R  +VDP +LDPAVL  P+VVH R
Sbjct:  181 VSRAEFKLEELFKEHGLPFGHSGTALDYGAAPGGWTRILAERGFRTTAVDPGDLDPAVLKRPDVVHER 248          
BLAST of mRNA_C-linearis_contig81.15955.1 vs. uniprot
Match: A0A7S4QYI9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QYI9_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.290e-10
Identity = 47/133 (35.34%), Postives = 68/133 (51.13%), Query Frame = 0
Query:  256 LIDEDSTFWEINFPNLKRERQVGAFTHVLSVV----FARGTYLWGLA-----EAATHGRSIIENNTEDTAVCRAFYKITEVYSRAELSFGEHWT---AMDIGAAPGGWTSFLAS--KCRRVLSVDPAELDPAV 374
            +  E  ++ E N+P L       + TH+L  V      R ++LW +       AA+     IENN     +CRA  K+ E Y+R   +  +      A+D GAAPGGWT FLA   +C+R+ S+DP ELDP +
Sbjct:  101 IAQELISYLEHNYPQLLHLLAPTSCTHILHAVKIPTTLRNSHLWCMGMDQVTTAASDSSQKIENNN---LICRAQSKLQEAYARYNYALPDATNGLIAVDCGAAPGGWTQFLAMTVQCKRIYSIDPGELDPII 230          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig81.15955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMA3_ECTSI4.110e-15254.93FtsJ domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JTM6_9PHAE2.830e-9458.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWK0_9PHAE1.160e-6852.62FtsJ domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YXR4_9STRA1.330e-1842.86FtsJ domain-containing protein n=1 Tax=Tribonema m... [more]
L8GJZ6_ACACA3.060e-1339.82Ribosomal RNA large subunit methyltransferase J, p... [more]
UPI00047077F67.620e-1231.88SAM-dependent methyltransferase n=2 Tax=Paenibacil... [more]
A0A7S4B2L4_CHRCT1.970e-1144.12Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A5J4YAH7_9CHLO4.530e-1138.33Glycerophosphocholine acyltransferase 1 n=1 Tax=Tr... [more]
A0A2T0UPL3_9ACTN2.250e-1052.9423S rRNA (Cytidine2498-2'-O)-methyltransferase n=2... [more]
A0A7S4QYI9_9STRA5.290e-1035.34Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1000.10coord: 7..111
e-value: 2.6E-7
score: 32.5
IPR002877Ribosomal RNA methyltransferase FtsJ domainPFAMPF01728FtsJcoord: 317..494
e-value: 4.9E-8
score: 33.3
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 14..41
score: 13.516
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 307..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig81contigC-linearis_contig81:394460..400928 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig81.15955.1mRNA_C-linearis_contig81.15955.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig81 394460..400944 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig81.15955.1 ID=prot_C-linearis_contig81.15955.1|Name=mRNA_C-linearis_contig81.15955.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=651bp
MTTREHERDRKPRAPSKKPCRFFHQNDCFRGDKCHMVHAPKHTLPPCETH
RFWTEDPWARPACEWGEDCTWPHPKPKGAEDPELLRTNIALQTENSQISR
VREYAVTVLGKGGAATATGVARSGTSRYRQKLALLEARDPEEFSRRCVSD
PSLCRSLLRVYLLGGGVSTSLEDAGKAISEAVAAGKFPGGSLLAEGDGAA
VADPALGASAAAPGDAAVSPPRPPLRVRVQALPKVCVAEKVESRRGSSRK
VMERQLIDEDSTFWEINFPNLKRERQVGAFTHVLSVVFARGTYLWGLAEA
ATHGRSIIENNTEDTAVCRAFYKITEVYSRAELSFGEHWTAMDIGAAPGG
WTSFLASKCRRVLSVDPAELDPAVLALPNVVHVRQVIQAATGVLHGLLSE
ASSPQTSKSAGGGRGQEVVDDTANRRGESDGVSGSISICPSSPNPNPSPA
TSAAAAVGSVVSPGAAGRARAVPGTSVVPTDAGNGAELVVSDMNAEPTVV
ADVLLSAMAAGLARPGAVLVATFKDFCGRHKKMRDEVVSAVARLQAGTAA
GVVVVGGCEGVDADGAKEAGDSAGSGSTSGSNEVVASTAAAGTGCPQGGG
GKAGAEGGVGGVCCTPPVAGTGGWWRLEGIQTMKLLAGGQTEVTIIARVA
Y
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002877rRNA_MeTrfase_FtsJ_dom
IPR000571Znf_CCCH
IPR029063SAM-dependent_MTases