prot_C-linearis_contig80.15911.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15911.1
Unique Nameprot_C-linearis_contig80.15911.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length532
Homology
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BLAST of mRNA_C-linearis_contig80.15911.1 vs. uniprot
Match: D7FV59_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV59_ECTSI)

HSP 1 Score: 629 bits (1622), Expect = 2.210e-221
Identity = 361/497 (72.64%), Postives = 393/497 (79.07%), Query Frame = 0 
Query:   49 MRALIAFLGTCPDHLASLRRLLPPLLRVADGDKDEWVQVVCGLVRQKLLPSEGGDSAGVGEGAAAPKSDFVLRKTAREVLERAKQNILERTGNGEGVADGG---GGSSSGEGRHMREAPYFGPLEERYVGRKQQPQKRDFVNAHFSVKYDFVSEFSEDLASNVGGASNTSSSPTGGGASVAAA-LASRAGQGGLLKAPGSLIPQPTPAAPNLAQARRVSLAAAVDPSAGSDGLRRTSKPLALSRNYAGLQPGSARGTSGVGSVRGVRAGXXXXXXXXXXGNRAGLMMINVDELQAIDTEKQSAREKAKGKPGRKKARVEAGDEEKATGTEPPTETTTSGDQL----------PDGQAPDKASGKGKAAESEAPVVKSSEPADGPAPIPQQGEIEAVAAMMVLGVGGGGEDAETSYLPEALTKLLENANSLRPEGKAKLESFFQKKTPKGSSQERIKYHEEVNPGADGEEMVRVTSYIRLHYETWVWDRIHKKKRIKS 531
            M+ALIAFLG   +HLASL  +LP LL +AD DKDEWVQVV GLVRQKLLP +  DS  VG+ A   +SDFVLRKT REVLERAKQN+ ER GNG+    GG   GG+   + R MREAPYFGPLEERYV RKQQP+K++F NAHFSVKYDFV EFSEDLASNVGG SNTSSSPTGGGASVAAA LASR GQGGLLK PGS  P PTPAAPNLAQARRVSLAA VDPSAGSDGLRRTSKPLALSRNY GLQ GS R +SGVG  RG R G            +AGLMMINVDELQAI  EKQSAREKAKGKPGRKKA++E G E+   G EP T  + +G Q            DGQ P+ ASG+GK A+ +AP  K S  ADGP P+PQQGEIEAVAAMMVLGV GGGEDAETSYLPEALTKLLENANSLRPEGKAKLESFFQKK P+GS QER+KYHEEV+PGADGE M+RVTSYIRL YETWVWDR+HKKKR+KS
Sbjct:    1 MKALIAFLGARKEHLASLNHVLPSLLGMADSDKDEWVQVVSGLVRQKLLPRDEDDSTSVGDEAKTSQSDFVLRKTVREVLERAKQNMSERAGNGKQRVVGGSTIGGNR--DTRRMREAPYFGPLEERYVSRKQQPRKQEFANAHFSVKYDFVGEFSEDLASNVGGTSNTSSSPTGGGASVAAAALASRVGQGGLLKTPGSFAPAPTPAAPNLAQARRVSLAAVVDPSAGSDGLRRTSKPLALSRNYVGLQHGSGRTSSGVGGARGTRGGGGASP------GKAGLMMINVDELQAIHAEKQSAREKAKGKPGRKKAKLEGGGEQSTAGMEPGTGASATGTQQVVANATDVGNTDGQLPEGASGEGKKAKPKAPA-KPSATADGPMPVPQQGEIEAVAAMMVLGVAGGGEDAETSYLPEALTKLLENANSLRPEGKAKLESFFQKKMPEGSQQERVKYHEEVSPGADGE-MMRVTSYIRLDYETWVWDRVHKKKRVKS 487
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV59_ECTSI2.210e-22172.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:664487..667391 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15911.1mRNA_C-linearis_contig80.15911.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 664102..667451 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15911.1 ID=prot_C-linearis_contig80.15911.1|Name=mRNA_C-linearis_contig80.15911.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=532bp
MPTPNHIRAFEVRLRANWSSEDVVQMLTPDFVESVLLPGFAALEPTIKMR
ALIAFLGTCPDHLASLRRLLPPLLRVADGDKDEWVQVVCGLVRQKLLPSE
GGDSAGVGEGAAAPKSDFVLRKTAREVLERAKQNILERTGNGEGVADGGG
GSSSGEGRHMREAPYFGPLEERYVGRKQQPQKRDFVNAHFSVKYDFVSEF
SEDLASNVGGASNTSSSPTGGGASVAAALASRAGQGGLLKAPGSLIPQPT
PAAPNLAQARRVSLAAAVDPSAGSDGLRRTSKPLALSRNYAGLQPGSARG
TSGVGSVRGVRAGGGGGGGGGGAGNRAGLMMINVDELQAIDTEKQSAREK
AKGKPGRKKARVEAGDEEKATGTEPPTETTTSGDQLPDGQAPDKASGKGK
AAESEAPVVKSSEPADGPAPIPQQGEIEAVAAMMVLGVGGGGEDAETSYL
PEALTKLLENANSLRPEGKAKLESFFQKKTPKGSSQERIKYHEEVNPGAD
GEEMVRVTSYIRLHYETWVWDRIHKKKRIKS*
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