prot_C-linearis_contig80.15910.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15910.1
Unique Nameprot_C-linearis_contig80.15910.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length511
Homology
BLAST of mRNA_C-linearis_contig80.15910.1 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI)

HSP 1 Score: 794 bits (2051), Expect = 7.380e-287
Identity = 454/488 (93.03%), Postives = 463/488 (94.88%), Query Frame = 0
Query:    1 MAQRSAADDELADRLGGISLEGLSGGDGKPSIGPAGLIHKDSDAIKLFVGQIPKHMEEEDLRPTFNEFGEIFDLAVIRDKVSGLHRGCAFLTYCARSSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGMIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYSYPMPAPPISPHXXXXXXXXXXXXGGQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPDXXXXXXXXXXYGDQGQGDYYPHPDYMGHQDG 486
            MAQRSA DDE+ADR+  I+LEGL+GG+ K SIGPAGLIHKDSDAIKLFVGQIPKHMEEEDLRP F EFGEIFDLAVIRDK+SGLHRGCAFLTYCAR SADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAI+ALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGG+IGSPGRHGSGPHPEAGGWMGHPGAGGQGAGY YPMP PP+SPH            GGQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYS PSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPDXXXXXXXXXXYGDQGQGDYYPHPDYMGHQDG
Sbjct:    1 MAQRSA-DDEVADRMANINLEGLAGGEAKSSIGPAGLIHKDSDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARVSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMSPHMMSGMPYGMAYGGGQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPDXXXXXXXXXXYGDQGQGDYYPHPDYMGHQDG 487          
BLAST of mRNA_C-linearis_contig80.15910.1 vs. uniprot
Match: A0A836CBS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS7_9STRA)

HSP 1 Score: 352 bits (902), Expect = 1.510e-112
Identity = 242/416 (58.17%), Postives = 282/416 (67.79%), Query Frame = 0
Query:   36 GLIHKDSDAIKLFVGQIPKHMEEEDLRPTFNEFGEIFDLAVIRDKVSGLHRGCAFLTYCARSSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGMIGSPGRHGSGPH-PEAGGWMGH---PGAGGQGAG-YSYPMPAPPISPHXXXXXXXXXXXXGGQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 446
            GL+ KD DAIKLF+GQ+PK ME + L P F+EFGE+FDLA+IRDK +G+HRGCAFLTYC R++A+AA AALHG R+L   QN LQVRPAEG  E++NKLFVGM PK+ANE E+R VF+ +G LRE+H+IRN DG+NKGCAFVK+  R+ A+ AIDALHE+YT++G PRPLVVKFADN +        L G I  PG   S P+    GG +G+    G   QGA  YSY          XXXXXXXXXXXX     G+  Q           GYPP P         P  PS    XXXXXXXXXXXXXXXXX                 RP EGP  +NLFIYHLP DL+DADLATAFA FG+V+SAKVY+DR + ESKGFGFVSY  P  A AAI  MNGFQIG+KRLKVQHKR
Sbjct:   19 GLLRKDPDAIKLFIGQVPKTMEADALLPLFSEFGEVFDLAIIRDKQTGMHRGCAFLTYCTRAAAEAATAALHGNRKLVGSQNALQVRPAEGHNERDNKLFVGMVPKAANEQELRKVFSSFGELREVHIIRNSDGSNKGCAFVKFMERECAVQAIDALHERYTLEGAPRPLVVKFADNNK-RNVVPRMLTGPI--PGGTDSSPYWSPPGGALGNLALAGGSQQGAPMYSYGGGYXXXXXXXXXXXXXXXXXXXXXXXGSSGQQM---------GYPPVP---------PAGPSAXX-XXXXXXXXXXXXXXXXXVPQGGGPSALVEELTPARPQEGPAKSNLFIYHLPHDLTDADLATAFASFGNVISAKVYVDRVTNESKGFGFVSYDNPEAAAAAIVHMNGFQIGTKRLKVQHKR 412          
BLAST of mRNA_C-linearis_contig80.15910.1 vs. uniprot
Match: A0A836CK81_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK81_9STRA)

HSP 1 Score: 323 bits (827), Expect = 1.600e-100
Identity = 220/411 (53.53%), Postives = 261/411 (63.50%), Query Frame = 0
Query:   36 GLIHKDSDAIKLFVGQIPKHMEEEDLRPTFNEFGEIFDLAVIRDKVSGLHRGCAFLTYCARSSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGMIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYSYPMPAPPISPHXXXXXXXXXXXXGGQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 446
            GL+ KD DAIKLFVGQIPKHME + L P F+EFG+IFDL +IRDK +G+HRGCAFLT+C R+SA+AAI ALHG R+L    N LQVR AE QAE+E KLFVGM   +A+E+++R +F+ YG +RE+H+IRN DG+NKGCAFVKY +R+ A  AIDAL+EQ TM+G PRPL+V+FAD+ +                     G HP  G         G  + Y  P      SP             G  A  APA  +                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX     RP EGP  +NLFIYH P DL+DADLATAFA FG+V+SAKVY+DR + ESKGFGFVSY  P  A  AIA MNGF IG+KRLKVQ+KR
Sbjct:    9 GLLQKDPDAIKLFVGQIPKHMESDALLPLFSEFGDIFDLTIIRDKQTGVHRGCAFLTFCTRASAEAAIQALHGNRKLAGAVNALQVRAAEAQAEREVKLFVGMVASTADEEDVRGIFSVYGEIREVHIIRNADGSNKGCAFVKYASREHAAAAIDALNEQMTMEGAPRPLLVRFADSSK--------------------RGAHPLRGA--------GDSSPYWSPAAGAIASPAASATNPYGEDSGGAYAAAAPADYAGAXXXXXXX-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDHPSRPQEGPARSNLFIYHWPADLTDADLATAFASFGNVISAKVYMDRLTNESKGFGFVSYDNPESAAVAIAHMNGFAIGNKRLKVQYKR 372          
BLAST of mRNA_C-linearis_contig80.15910.1 vs. uniprot
Match: A0A7S1BYN5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA)

HSP 1 Score: 319 bits (817), Expect = 1.730e-98
Identity = 198/430 (46.05%), Postives = 246/430 (57.21%), Query Frame = 0
Query:   41 DSDAIKLFVGQIPKHMEEEDLRPTFNEFGEIFDLAVIRDKVSGLHRGCAFLTYCARSSADAAIAALHGQRRLDRGQNPLQVRPAEGQ------AEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGM-IGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYSYPMPAPPISPHXXXXXXXXXXXXGGQAPGAPAQG-----SYVYYPYGAPGYPPQP-----------GGPG-QYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 446
            D + +KLFVGQ+PK + EEDL PTF+EFG I +L VIRDK +G HRGCAF+TY + SSA+     LH Q     G+ P+Q+RPA G        EQENKLF+GM  ++A+E+ IR VFA +G +REI++IRN DG+NKGCAF+KY+ R SAL AI  L+ +  M G  RPL+VKFAD K   +A    +    +GSPGR  SG +P +                 Y +P  P+ P+               +   P  G     +++Y P G  GYP  P           GG G Q   G PS                                        RP EGPPGANLFIYHLP DL+DADLATAFAPFG+V+SAKVY+D+ +GESKGFGFVSY   + A+AAI QMNGFQIGSKRLKVQHKR
Sbjct:  122 DDEPVKLFVGQVPKSLAEEDLFPTFSEFGPIKELTVIRDKHTGQHRGCAFVTYWSSSSAERVQEVLHDQLTFTNGRKPVQIRPAIGSNSTPTTPEQENKLFIGMTSRNADENAIREVFASFGEIREIYIIRNADGSNKGCAFLKYSQRDSALSAITMLNNKVVMDGASRPLIVKFADTKAQRRARGNGMSSRGLGSPGRGQSGHNPSS----------------PYFIPPVPVYPNYQAQRAPPIGIPHQYSQYPPQYGQSSSQNFMYVPTGPYGYPSAPFNHNQMGNHSGGGSGAQQPGGAPSAFEPVPNPNHAVHPSRGSPRTSPAPGKVYQHRSDGPNTNTRPKEGPPGANLFIYHLPHDLTDADLATAFAPFGNVISAKVYVDKFTGESKGFGFVSYDVVTSADAAIEQMNGFQIGSKRLKVQHKR 535          
BLAST of mRNA_C-linearis_contig80.15910.1 vs. uniprot
Match: W7U5L7_9STRA (Rna binding protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L7_9STRA)

HSP 1 Score: 316 bits (809), Expect = 1.380e-97
Identity = 218/493 (44.22%), Postives = 263/493 (53.35%), Query Frame = 0
Query:   34 PAGLIHKDSDAIKLFVGQIPKHMEEEDLRPTFNEFGEIFDLAVIRDKVSGLHRGCAFLTYCARSSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRGTQAAAG--------RLGG--------------------MIGSPGRHGSGPHPE------------AGGWMGHPGAG--GQGAGYSYPMPAPP-------------ISPHXXXXXXXXXXXXGGQAP-GAPAQGSYVYYPYGAPGYPPQ--------PGGPGQYHSGPP----------------SPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 446
            PAGL  KD DAIKLFVGQIPK M E+ LRP F E+G IF+L VIRDK SG+HRGCAFLTYC + +A AA  ALH + +L   QN LQVRPA+   E+ENKLFVGM PK+ +E  +  +FAP+G ++EIH+IR+ +G  KGCAF+K+  R SA+ AI+AL+E+  ++G  RP+VV+FA++KR  +   G        R GG                    M+  PG  G   HP             AGG +G  G    G+G G      AP              + PH             G  P G      + Y PYGA   PP         PGGP Q H                    SP   GG                             XXX  +P EGP GANLFIYHLP DL+DADLATAF PFG V+SAKVY+D+ SGESKGFGFVSY  P  A+AAI  MNGFQIG+KRLKVQHKR
Sbjct:   25 PAGLT-KDGDAIKLFVGQIPKDMGEDALRPFFAEYGPIFELTVIRDKTSGMHRGCAFLTYCTKEAAQAASLALHNKLKLPDAQNALQVRPADLHTERENKLFVGMLPKNVDEGLVEGLFAPFGKIKEIHIIRSVEGEGKGCAFLKFVERSSAIQAIEALNERQVVEGASRPMVVRFAESKRSGEGGQGAGVXXXXXRRGGXXXXXXXXXXGPMEGLLMAPMMMVPGPLGHSLHPPNLPLRGGSEGGAAGGGLGVAGLSPTGRGKGXXXXXEAPGGGSSPYSGAPYWMLGPHGQPQASAHFPFQAGPVPMGMLGLPHHQYLPYGAVRAPPYLYYPPYFGPGGP-QGHGAAADGXXXXXXXXXXXXXGSPFVYGGGVPGGMRVNTAVGAPHGAGHAGAFASRGGXXXGSKPLEGPAGANLFIYHLPHDLTDADLATAFNPFGTVVSAKVYVDKNSGESKGFGFVSYDSPLAADAAIKAMNGFQIGTKRLKVQHKR 515          
BLAST of mRNA_C-linearis_contig80.15910.1 vs. uniprot
Match: A0A448YXA3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXA3_9STRA)

HSP 1 Score: 315 bits (808), Expect = 7.680e-97
Identity = 195/410 (47.56%), Postives = 243/410 (59.27%), Query Frame = 0
Query:   41 DSDAIKLFVGQIPKHMEEEDLRPTFNEFGEIFDLAVIRDKVSGLHRGCAFLTYCARSSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRGTQA----AAGRLGGMIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYSYPMPAPPISPHXXXXXXXXXXXXGGQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 446
            + + IKLFVGQ+PK M EED+ PTFN+FG + D+++IRDK + LHRGCAF+TY + S A+ A  ALHG+      + P QV+PAE    QENKLF+GM  + A EDE+R +FAP+G +REI++IRN DGT+K  AF++Y  R +A++AI+ALH    M+G  RPL+VKFAD K         +  R    IG P     GP+P     MG P  GG    Y+  M APP                GG  PG P  G  +Y P    GYPP P  P  +  G  S  +G G                                  RP EGP GANLF+YHLP DL+DADLATAF PFG+V+SAKVY+DR +G+SKGFGFVSY     AE+AI QMNGFQIG+KRLKVQHKR
Sbjct:  178 EDEPIKLFVGQVPKTMNEEDIFPTFNDFGPLKDVSIIRDKHTQLHRGCAFVTYLSASDAEQAQEALHGRHFFPGARRPAQVKPAEPSV-QENKLFIGMLSRRAGEDEVRELFAPFGEIREIYMIRNGDGTSKCAAFLRYVGRDAAVNAIEALHNNLVMEGAARPLIVKFADTKHQRHVRQMRSVRRHEMFIGGPAGGYPGPYPGHHMPMGPPPVGGPPHQYAAHMGAPPHQ----------MQHYGGPYPG-PGAGGQMYNPM---GYPPAPHYPSPHPYGGFSERQGQGPDGGHQHQSTHPQRMKDGIRGNPRHHNQSTNP--RPREGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGDSKGFGFVSYDSVISAESAIEQMNGFQIGNKRLKVQHKR 570          
BLAST of mRNA_C-linearis_contig80.15910.1 vs. uniprot
Match: A0A1W0A7F0_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7F0_9STRA)

HSP 1 Score: 300 bits (767), Expect = 2.680e-93
Identity = 199/426 (46.71%), Postives = 238/426 (55.87%), Query Frame = 0
Query:   43 DAIKLFVGQIPKHMEEEDLRPTFNEFGEIFDLAVIRDKVSGLHRGCAFLTYCARSSADAAIAALHGQRRLDRGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQ-DGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGMIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYSYPMPAPPISP----HXXXXXXXXXXXXGGQ-APG-----APAQGSYVYY-PYG---APGYP--PQPGGPGQYHSGP---PSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 446
            DA+KLFVGQ+P+ MEE DLRP    FG ++D+ +IRDKVSG HRGCAF+T+C R +ADAAI  LH Q  L    NPLQVRPAEGQA   QE+KLF+GM PK A+E  IR VFAP+G + EI+++R+   G +KGCAF+KY  R SA  AI+A +  YTM  G  PLVVKFAD++R     A                    A  W   PG           +P P I      +            GGQ +PG     A    +++YY PY    A GY   P  GGP  +   P   P P  G                                       EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKV++D+ +GESKGFGFVSY     A+AAIA MNGFQIGSKRLKVQHKR
Sbjct:   34 DAVKLFVGQVPRSMEEADLRPILEAFGPLYDIVIIRDKVSGAHRGCAFVTFCTRDAADAAIETLHNQVTLPMSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADEASIREVFAPHGAIEEIYILRHPATGQSKGCAFLKYKDRHSASSAIEAFNGIYTMDRGTAPLVVKFADSRRQRIQRARNQAATA------------AAAYWQLPPGG---------TIPFPQIQQIQQQYMQQMQVFGAQALGGQTSPGGSPIPATNPATFMYYNPYAFAAASGYNSFPPAGGPAPFPLDPLATPMPGMG-----------------------------LSGARAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVQAADAAIASMNGFQIGSKRLKVQHKR 409          
BLAST of mRNA_C-linearis_contig80.15910.1 vs. uniprot
Match: A0A485KNC1_9STRA (Aste57867_9466 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNC1_9STRA)

HSP 1 Score: 298 bits (763), Expect = 9.710e-93
Identity = 192/421 (45.61%), Postives = 238/421 (56.53%), Query Frame = 0
Query:   43 DAIKLFVGQIPKHMEEEDLRPTFNEFGEIFDLAVIRDKVSGLHRGCAFLTYCARSSADAAIAALHGQRRLDRGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQD-GTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGMIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYSYPMPAPPISPHXXXXXXXXXXXXGGQA-----------PGAPAQ-GSYVYY-PYGAPG-YPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 446
            DA+KLFVGQ+P+ M+E++LRP    FG ++D+ +IRDK+SG HRGCAF+TYC+R +A+AAI  LH Q  L    NPLQVRPAEGQA   QE+KLF+GM PK A+E +IRAVF  +G + EI+++R+   G +KGCAF+KY  R +A  AID ++   TM  G  PLVVKFAD++R     A                    A  W   PGA          +P P +               G QA           P APA   +++YY PYG PG YP  P  P  +   P + +                                         EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKVY+D+ +GESKGFGFVSY     A+AAIA MNGFQIGSKRLKVQHKR
Sbjct:   31 DAVKLFVGQVPRSMDEDELRPVLEAFGPLYDIVIIRDKISGAHRGCAFVTYCSRDAAEAAIETLHNQVTLPMSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADEADIRAVFESHGEIEEIYILRHPGTGQSKGCAFLKYKDRHAASTAIDMINGVVTMDRGTAPLVVKFADSRRQRIQRARNQAATS------------AAAYWQMPPGAA---------IPFPQLQ-QIQQQYMQQMQAFGAQAAALNPSSNGVPPPAPANPAAFMYYNPYGIPGAYPSFPAAPVGFPLDPAAAAAASDSAARASSQL----------------------------EGPIGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKNTGESKGFGFVSYDSAQAADAAIASMNGFQIGSKRLKVQHKR 401          
BLAST of mRNA_C-linearis_contig80.15910.1 vs. uniprot
Match: T0QG38_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG38_SAPDV)

HSP 1 Score: 296 bits (759), Expect = 5.330e-92
Identity = 196/422 (46.45%), Postives = 238/422 (56.40%), Query Frame = 0
Query:   43 DAIKLFVGQIPKHMEEEDLRPTFNEFGEIFDLAVIRDKVSGLHRGCAFLTYCARSSADAAIAALHGQRRLDRGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQ-DGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGMIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYSYPMPAPPISPHXXXXXXXXXXXXGGQA------PGA---PAQG--SYVYY-PYG---APGYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 446
            DA+KLFVGQ+P++MEE DLRP    FG ++D+ +IRDKVSG HRGCAF+T+C+R +A+AAI  LH Q  L    NPLQVRPAEGQA   QE+KLF+GM PK A+E  IR VFA +G + EI+++R+   G +KGCAF+KY  R +A  AIDA +  YTM+ G  PLVVKFAD++R     A                    A  W   PG           +P P +               G QA      PGA   PA    +++YY PY    A GYP  P G     + PP P                                          EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKV++D+ +GESKGFGFVSY     A+AAIA MNGFQIGSKRLKVQHKR
Sbjct:   37 DAVKLFVGQVPRNMEEADLRPILEAFGPLYDIVIIRDKVSGTHRGCAFVTFCSRDAAEAAIETLHNQVTLPLSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADESSIREVFASHGPIEEIYILRHPATGQSKGCAFLKYKDRHAASAAIDAYNGTYTMERGTAPLVVKFADSRRQRIQRARNQAATA------------AAAYWQLPPGG---------TIPFPQLQ-QIQQQYMQQMQAFGAQALAGQSSPGASPSPAANPAAFMYYNPYAFAAATGYPSFPTG-----AAPPFP--------------LDALASAVPSSVAAVAAASSGARAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVQAADAAIASMNGFQIGSKRLKVQHKR 417          
BLAST of mRNA_C-linearis_contig80.15910.1 vs. uniprot
Match: A0A1E7FGE6_9STRA (RNA-binding domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGE6_9STRA)

HSP 1 Score: 298 bits (763), Expect = 5.440e-91
Identity = 217/426 (50.94%), Postives = 266/426 (62.44%), Query Frame = 0
Query:   41 DSDAIKLFVGQIPKHMEEEDLRPTFNEFGEIFDLAVIRDKVSGLHRGCAFLTYCARSSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRGTQAAAGR----------LGGMIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYSYP----MPAPPISPHXXXXXXXXXXXXGGQAPGAPAQGS--YVYYP-YGAP---GYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 446
            + + IKLFVGQ+PK M EED+ PTF+ FG + D+++IRDK + LHRGCAF+TY + + AD A  +LHGQ      + P QV+PAE     ENKLFVGM  + A EDEIR +FAP+G +REI++IRN DG++K  AF++Y  R SA+ AI+ LH    ++G  RPL+VKFADNK   Q    R          +G  +G PG +  G H       G P        + YP    M  PP + H            G   PG P  G    +Y P Y +P   G PP P G G +    P+ +   G  XXXXXXXXXXXXXXXXXXXXXXXXX       RP EGP GANLF+YHLP DL+DADLATAF PFG+V+SAKVY+DR + ESKGFGFVSY     AE+AI QMNGFQIG+KRLKVQHKR
Sbjct:   81 EEEPIKLFVGQVPKTMNEEDIFPTFDSFGPLKDVSIIRDKQTQLHRGCAFVTYWSSNDADKAQESLHGQHVFPGARRPAQVKPAEPSVP-ENKLFVGMLSRKAGEDEIRELFAPFGEIREIYMIRNADGSSKCAAFLRYIDRDSAIQAIEMLHNNLVLEGAARPLIVKFADNKHQRQQRHMRNVRRQELMTVMGPGVGYPGIY-PGHHMAMAPLPGAP-------SHQYPPHHQMGGPPHAHHLPQYH-------GAPYPGGPGGGGPPAMYNPMYPSPQHYGGPPHPYGAGGFQD--PNQNNRQGSHXXXXXXXXXXXXXXXXXXXXXXXXXPNQAANPRPREGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTDESKGFGFVSYDSVISAESAIEQMNGFQIGNKRLKVQHKR 488          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV60_ECTSI7.380e-28793.03Trinucleotide repeat containing 4, isoform CRA_d n... [more]
A0A836CBS7_9STRA1.510e-11258.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CK81_9STRA1.600e-10053.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1BYN5_9STRA1.730e-9846.05Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
W7U5L7_9STRA1.380e-9744.22Rna binding protein n=3 Tax=Monodopsidaceae TaxID=... [more]
A0A448YXA3_9STRA7.680e-9747.56Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1W0A7F0_9STRA2.680e-9346.71CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca... [more]
A0A485KNC1_9STRA9.710e-9345.61Aste57867_9466 protein n=1 Tax=Aphanomyces stellat... [more]
T0QG38_SAPDV5.330e-9246.45Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A1E7FGE6_9STRA5.440e-9150.94RNA-binding domain-containing protein n=1 Tax=Frag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 370..443
e-value: 1.4E-23
score: 94.3
coord: 133..208
e-value: 1.8E-19
score: 80.7
coord: 46..122
e-value: 1.7E-17
score: 74.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 371..441
e-value: 2.0E-18
score: 66.0
coord: 134..197
e-value: 1.4E-14
score: 53.6
coord: 47..110
e-value: 5.8E-13
score: 48.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 369..447
score: 18.12
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 45..126
score: 15.75
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 132..212
score: 16.295
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 37..128
e-value: 2.4E-22
score: 81.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 129..220
e-value: 4.3E-25
score: 89.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 359..474
e-value: 1.0E-26
score: 95.6
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 117..214
NoneNo IPR availablePANTHERPTHR24012:SF686CUGBP ELAV-LIKE FAMILY MEMBER 1coord: 117..214
coord: 343..447
coord: 43..131
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 343..447
coord: 43..131
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 130..448
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 28..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:659200..662641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15910.1mRNA_C-linearis_contig80.15910.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 659141..662897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15910.1 ID=prot_C-linearis_contig80.15910.1|Name=mRNA_C-linearis_contig80.15910.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=511bp
MAQRSAADDELADRLGGISLEGLSGGDGKPSIGPAGLIHKDSDAIKLFVG
QIPKHMEEEDLRPTFNEFGEIFDLAVIRDKVSGLHRGCAFLTYCARSSAD
AAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRA
VFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQG
GPRPLVVKFADNKRGTQAAAGRLGGMIGSPGRHGSGPHPEAGGWMGHPGA
GGQGAGYSYPMPAPPISPHVMPGMPYGMPYGGGQAPGAPAQGSYVYYPYG
APGYPPQPGGPGQYHSGPPSPSRGGGGYGGGGHPRSPSGSDRHRARGMHE
GEAGGGAGASRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKV
YIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQS
TDDPDDRDEGGGGGGYGDQGQGDYYPHPDYMGHQDGRCAMLDVSAVGQTW
SRRIQAGLTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf