prot_C-linearis_contig80.15886.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15886.1
Unique Nameprot_C-linearis_contig80.15886.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1231
Homology
BLAST of mRNA_C-linearis_contig80.15886.1 vs. uniprot
Match: D7G042_ECTSI (TOPEUc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G042_ECTSI)

HSP 1 Score: 965 bits (2495), Expect = 0.000e+0
Identity = 506/666 (75.98%), Postives = 558/666 (83.78%), Query Frame = 0
Query:  383 VKAQDRAPKKFKEMT-RAEKIEQAMKTYKWWEEPEKEDGKQWESLEHNGAHFAPEYKPHGVKLKYDGKDVTLTTPQEEVATFYASMPLDGPQLAEQGADFNKNFFTDFKAVLGNNHRIKDFKLLDFSAMRSHLEIAKQIKRAATDGEKAAAKTAKEELMHKYSYAIVDNHLEKVGNYNVEPPGLFRGRGKHPKTGMLKARVTASDISINCGEEVCVPRCSLPGYAWQSVQHDPSVTWLSKWDGVLAGTKYMMLAASSSFKGQSDVRKYDKAMKLKGFIERIRRDYTAKLTSSDKRTKQIATAVWVIDKLALRVGGEKGKDEADTVGCCSLRTEHLTFHEDNSVHEVQMEFLGKDSMLFKETIDFDKYKETGRRVFKNLKQFCKGKRQLEDVFDYLDPSILNQHLQSLMPGLTAKVFRTYNASDTLQIKLPDEEALAGLSVAEKVALYNGANRDVAILCNHQRTVSSAQKEGILKQKDQLDLLKKQKYELKQMLKIVKTGKGSVRLQSKDKTTDERAKRXXXXXXXXXANAQTDGEKVAATKAYEAAMVMKKAAAQSKTETSHLFAKTPSEETVAKRIKKWAEKMKKLEIVIRDKDDNKEVSLTTSKINYMDPRVSVAWCKRHEVPVEKVFAKTLRDKFVWAMNVPPDWSFSYETLFNSKQSTLDVP 1047
             +A+D+APK FKEMT RAEKIE+AMK Y WWEEP  E GKQW+SLEHNGAHFAPEYKPHGVKLKYDGK+V LTT QEEVATFYASMPLDGPQLAEQG  FNKNFFTDFKAVLG  H IKDFKLLDFSA+R+HL+I KQIK AATDGEKAAAKT KEEL+HKYSYAIVD HLEKVGNYNVEPPGLFRGRG+HPKTG LKARVTASDI+INC E VCVPRC++PGYAWQSVQH+PS TWLSKWDG+LAGTKYMMLAASSSFKG+SD+ KYDKAMKLKGFIERIR DY  KL+SSD+RTKQIATAVW+IDKLALRVGGEKG+DEADTVGCCSLRTEHLTFH  N+  E+ +EFLGKDSMLFKETIDFD+Y + GRRVFKNL+ FCKGKRQ E+VFDYLDPSILN HLQSLMPGLTAKVFRTYNASDTLQ KLP E ALAGLSVAEKVALYN ANR+VAILCNHQRTVSSAQKEG+ KQ+D+L +L KQK ELKQML+ +K+GKGSV L+S DK+ +E A R   XXXXXX                                  HLFAK PS E+V +RIK+W +K+KKL+IVIRD+DDNKEVSL+TSKINYMDPRV               FAKTL++KFVWAMNVPPDW+FSYETL+NSKQS LDVP
Sbjct:  327 AQAKDKAPKGFKEMTTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVHLTTQQEEVATFYASMPLDGPQLAEQGKVFNKNFFTDFKAVLGKGHVIKDFKLLDFSAIRAHLDITKQIKLAATDGEKAAAKTVKEELVHKYSYAIVDGHLEKVGNYNVEPPGLFRGRGEHPKTGKLKARVTASDIAINCAEGVCVPRCNMPGYAWQSVQHNPSATWLSKWDGLLAGTKYMMLAASSSFKGKSDMAKYDKAMKLKGFIERIRTDYVKKLSSSDRRTKQIATAVWIIDKLALRVGGEKGQDEADTVGCCSLRTEHLTFHATNN--EIDLEFLGKDSMLFKETIDFDRYGDVGRRVFKNLQAFCKGKRQSEEVFDYLDPSILNLHLQSLMPGLTAKVFRTYNASDTLQQKLPGEAALAGLSVAEKVALYNLANREVAILCNHQRTVSSAQKEGLEKQRDRLAMLTKQKQELKQMLRTIKSGKGSVPLKSNDKSQEESAVRALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHLFAKNPSAESVEERIKRWGDKIKKLQIVIRDRDDNKEVSLSTSKINYMDPRV---------------FAKTLQNKFVWAMNVPPDWNFSYETLYNSKQSVLDVP 975          
BLAST of mRNA_C-linearis_contig80.15886.1 vs. uniprot
Match: A0A6H5JUC6_9PHAE (TOPEUc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC6_9PHAE)

HSP 1 Score: 895 bits (2312), Expect = 8.790e-308
Identity = 457/587 (77.85%), Postives = 506/587 (86.20%), Query Frame = 0
Query:  383 VKAQDRAPKKFKEMTRAEKIEQAMKTYKWWEEPEKEDGKQWESLEHNGAHFAPEYKPHGVKLKYDGKDVTLTTPQEEVATFYASMPLDGPQLAEQGADFNKNFFTDFKAVLGNNHRIKDFKLLDFSAMRSHLEIAKQIKRAATDGEKAAAKTAKEELMHKYSYAIVDNHLEKVGNYNVEPPGLFRGRGKHPKTGMLKARVTASDISINCGEEVCVPRCSLPGYAWQSVQHDPSVTWLSKWDGVLAGTKYMMLAASSSFKGQSDVRKYDKAMKLKGFIERIRRDYTAKLTSSDKRTKQIATAVWVIDKLALRVGGEKGKDEADTVGCCSLRTEHLTFHEDNSVHEVQMEFLGKDSMLFKETIDFDKYKETGRRVFKNLKQFCKGKRQLEDVFDYLDPSILNQHLQSLMPGLTAKVFRTYNASDTLQIKLPDEEALAGLSVAEKVALYNGANRDVAILCNHQRTVSSAQKEGILKQKDQLDLLKKQKYELKQMLKIVKTGKGSVRLQSKDKTTDERAKRXXXXXXXXXANAQTDGEKVAATKAYEAAMVMKKAAAQSKTETSHLFAKTPSEETVAKRIKKWAEKMKKLE 969
             +A+D+APKK K++TRAEKIE+AMK Y WWEEP  E GKQW+SLEHNGAHFAPEYKPHGVKLKYDGK+V LTT QEEVATFYASMPLDGPQLAEQG  FNKNFFTDFKAVLG  H IKDFKLLDFSA+R+HL+I KQIKRAATDGEKAAAKT KEEL+HKYSYAIVD HLEKVGNYNVEPPGLFRGRG+HPKTG LKARVTASDI+INC E VCVPRC +PGYAWQSVQH+PS TWLSKWDG+L GTKYMMLAASSSFKG+SD+ KYDKAMKLKGFIERIR DY  KL+SSD+RTKQIATAVW+IDKLALRVGGEKG+DEADTVGCCSLRTEHLTFH  N+  E+ +EFLGKDSMLFKETIDFD+Y + GRRVFKNL+ FCKGKRQ E+VFDYLDPSILN HLQSLMPGLTAKVFRTYNASDTLQ KLP E ALAGLSVAEKVA YN ANR+VAILCNHQRTVSSAQKEG+ KQ+D+L +L KQK ELKQML+ +K+GKGSV L+S DK+ +E A R         ANA+TD EKVA  K  E A   +KAA Q+  E  +LFAK PS E+V  RIK W +K+KKL+
Sbjct:  380 AQAKDKAPKKPKKLTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVNLTTQQEEVATFYASMPLDGPQLAEQGKVFNKNFFTDFKAVLGKGHFIKDFKLLDFSAIRAHLDITKQIKRAATDGEKAAAKTVKEELVHKYSYAIVDGHLEKVGNYNVEPPGLFRGRGEHPKTGKLKARVTASDIAINCAEGVCVPRCDMPGYAWQSVQHNPSATWLSKWDGLLVGTKYMMLAASSSFKGKSDMAKYDKAMKLKGFIERIRTDYIKKLSSSDRRTKQIATAVWIIDKLALRVGGEKGQDEADTVGCCSLRTEHLTFHATNN--EIDLEFLGKDSMLFKETIDFDRYGDVGRRVFKNLQAFCKGKRQSEEVFDYLDPSILNLHLQSLMPGLTAKVFRTYNASDTLQQKLPSEAALAGLSVAEKVAQYNLANREVAILCNHQRTVSSAQKEGLEKQRDRLAMLTKQKQELKQMLRTIKSGKGSVPLRSNDKSQEESAARALEKAEKAKANAKTDEEKVATMKTGETAKAXRKAAQQANQEAMYLFAKNPSAESVEGRIKNWGDKIKKLQ 964          
BLAST of mRNA_C-linearis_contig80.15886.1 vs. uniprot
Match: A0A7S2WTQ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ7_9STRA)

HSP 1 Score: 698 bits (1802), Expect = 5.700e-234
Identity = 372/644 (57.76%), Postives = 466/644 (72.36%), Query Frame = 0
Query:  392 KFKEMTRAEKIEQAMKTYKWWEEPEKEDGKQWESLEHNGAHFAPEYKPHGVKLKYDGKDVTLTTPQEEVATFYASMPLDGPQLA--EQGADFNKNFFTDFKAVLGNNHRIKDFKLLDFSAMRSHLEIAKQIKRAATDGEKAAAKTAKEELMHKYSYAIVDNHLEKVGNYNVEPPGLFRGRGKHPKTGMLKARVTASDISINCGEEVCVPRCSLPGYAWQSVQHDPSVTWLSKW-DGVLAGTKYMMLAASSSFKGQSDVRKYDKAMKLKGFIERIRRDYTAKLTSSDKRTKQIATAVWVIDKLALRVGGEKGKDEADTVGCCSLRTEHLTF-HEDNSVHEVQMEFLGKDSMLFKETIDFDKYKETGRRVFKNLKQFCKGKRQLEDVFDYLDPSILNQHLQSLMPGLTAKVFRTYNASDTLQIKLPDEEALAGLSVAEKVALYNGANRDVAILCNHQRTVSSAQKEGILKQKDQLDLLKKQKYELKQMLKIVKTGKGSVRLQSKDKTTDERAKRXXXXXXXXXANAQTDGEKVAATKAYEAAMVMKKAAAQSKTETSHLFAKTPSEETVAKRIKKWAEKMKKLEIVIRDKDDNKEVSLTTSKINYMDPRVSVAWCKRHEVPVEKVFAKTLRDKFVWAMNVPPDWSF 1031
            K K+ T+ E+++QAMK+YKWWE  +   G+QW +LEHNG  F PEYKPHGV LKY+GKD+ L    EE+ATFY  +P DGPQL   E    F KNFFTDFK  LG  H IK F+  DFSA+R H+E  + IK+AAT+ EK AAK  K+ L  KY YA+VD HLEK+GN   EPP LFRGRGKHP  G +K RV    ++IN G+   +P C  PG+AW +VQHD +VTW++ W + +L   KY+MLAA SSFKG+SD  KY+KAM+LKG I +IR DY   L + D  ++Q+ATA+WVID LALRVGGEKG+DEADTVGCCSLR EH+ F  E    H++++EFLGKDSM +KET DF +Y E G +VF+N   FCK K+  + V D LDP  LN+HLQS+MPGLTAKVFRTYNAS+TLQ ++P  E++ G+SV +KV +YN ANR VAILCNHQRTVS A ++ +    ++L L K+QK EL  MLK VK+GK       K+    E AK XXXXXXXXX    T  +K+ ATKA EAA  +++ A  +   +SHLF++ PS E + KRI +W EK++KL++ IR+KDDNKEV+L TSKINY DPR+SVAWCKR EVP+E+VF KTLRDKFVWAM VPPDWSF
Sbjct:  140 KLKKFTKVERLDQAMKSYKWWEHEDLPAGQQWRTLEHNGLCFPPEYKPHGVALKYEGKDLVLPPDLEELATFYGLVPDDGPQLGDPETRPIFQKNFFTDFKKALGGEHEIKKFQGCDFSAIREHIEKERLIKKAATEVEKQAAKEEKQSLQFKYGYALVDGHLEKIGNTMAEPPSLFRGRGKHPLMGKVKQRVLPEQVTINIGKNAKIPVCPQPGHAWGAVQHDNTVTWMATWHENILGKNKYVMLAAQSSFKGKSDRGKYEKAMRLKGCIGKIRADYKKNLNAKDIFSRQLATAMWVIDILALRVGGEKGEDEADTVGCCSLRVEHIKFGQEGQGPHDIELEFLGKDSMQYKETTDFSRYGEVGIQVFQNFVSFCKKKKPDQQVLDQLDPPELNRHLQSIMPGLTAKVFRTYNASETLQNEVPTPESMKGMSVQQKVLMYNEANRKVAILCNHQRTVSKAMEKSMDTLHERLALFKRQKNELSAMLKAVKSGKTKDVKVKKETDALEEAKNXXXXXXXXXXXXVTPEQKIQATKATEAAKELQRQARLTVAGSSHLFSRVPSAEQLTKRIDQWIEKIRKLQLDIRNKDDNKEVALGTSKINYCDPRISVAWCKRCEVPIERVFPKTLRDKFVWAMFVPPDWSF 783          
BLAST of mRNA_C-linearis_contig80.15886.1 vs. uniprot
Match: A0A836C9X0_9STRA (DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X0_9STRA)

HSP 1 Score: 683 bits (1762), Expect = 3.090e-229
Identity = 352/647 (54.40%), Postives = 450/647 (69.55%), Query Frame = 0
Query:  406 MKTYKWWEEPEKEDGKQWESLEHNGAHFAPEYKPHGVKLKYDGKDVTLTTPQEEVATFYASMPLDGPQLAEQGAD--FNKNFFTDFKAVLGNNHRIKDFKL--LDFSAMRSHLEIAKQIKRAATDGEKAAAKTAKEELMHKYSYAIVDNHLEKVGNYNVEPPGLFRGRGKHPKTGMLKARVTASDISINCGEEVCVPRCSLPGYAWQSVQHDPSVTWLSKW-DGVLAGTKYMMLAASSSFKGQSDVRKYDKAMKLKGFIERIRRDYTAKLTSSDKRTKQIATAVWVIDKLALRVGGEKGKDEADTVGCCSLRTEHLTFHEDNSVHEVQMEFLGKDSMLFKETIDFDKYKETGRRVFKNLKQFCKGKRQLEDVFDYLDPSILNQHLQSLMPGLTAKVFRTYNASDTLQIKLPDEEALAGLSVAEKVALYNGANRDVAILCNHQRTVSSAQKEGILKQKDQLDLLKKQKYELKQMLKIVKTGKGSVRLQSKDKTTDERAKRXXXXXXXXXANAQTDGEKVAATKAYEAAMVMKKAAAQSKTETSHLFAKTPSEETVAKRIKKWAEKMKKLEIVIRDKDDNKEVSLTTSKINYMDPRVSVAWCKRHEVPVEKVFAKTLRDKFVWAMNVPPDWSFSYETLFNSKQSTLDVP 1047
            ++ YKWWEEP    G+QW  LEHNG  F  EY+PHGV L YDG+++ L+   EE+ATF+A +PLDGPQL +      F+ NFF+D+K  +   H +K+ K    DF AMR+HL+  + IK+AATDGE+AAAK  KE   H +  AIVD HLEKVGN+ +EPPGLFRGRGKHPKTG LK R   S++++N GEE  VP+C +PG+AW +VQHDP V WLS W + +    KY ML+ASSSFKG+SD+ KY+KAM+LKG I+ IRR+Y   L +S    +Q+ATA+W+IDKLALRVGGEKG+DEADTVGCC+LR EH+TF    +  E+++EFLGKDSMLFK+ IDF  Y + G +VF NL  FCKG++  E VF  +DP+ LN+HLQSLMPGL+AKVFRTYNAS+TLQ +LP  +AL  ++V  KV  YN ANR+VAILCNHQRTVS A  +      +++  +K+Q+ +LK  LK+ K GK               AK+          +A  D EK   T              Q K E SH+FA TPSEE + ++I+ W  K+KK+E+ +RDK+ NKEVSL TSKINYMDPR+SVAWCKR+EVP+E++FAKTLRDKFVWAMNVPPDW F +ETL      + D P
Sbjct:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGT-REMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGK---------------AKKIPLKGRGSSQDADDDEEKKELT--------------QRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFETLRAVTAESSDEP 669          
BLAST of mRNA_C-linearis_contig80.15886.1 vs. uniprot
Match: A0A4D9D5J1_9STRA (TOPEUc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5J1_9STRA)

HSP 1 Score: 684 bits (1765), Expect = 3.060e-227
Identity = 364/652 (55.83%), Postives = 455/652 (69.79%), Query Frame = 0
Query:  397 TRAEKIEQAMKTYKWWEEPEKEDGKQWESLEHNGAHFAPEYKPHGVKLKYDGKDVTLTTPQEEVATFYASMPLDGPQLAEQGAD--FNKNFFTDFKAVLGNNHR----IKDFKLLDFSAMRSHLEIAKQIKRAATDGEKAAAKTAKEELMHKYSYAIVDNHLEKVGNYNVEPPGLFRGRGKHPKTGMLKARVTASDISINCGEEVCVPRCSLPGYAWQSVQHDPSVTWLSKW-DGVLAGTKYMMLAASSSFKGQSDVRKYDKAMKLKGFIERIRRDYTAKL-TSSDKRTKQIATAVWVIDKLALRVGGEKGKDEADTVGCCSLRTEHLTF---------HEDNSVHEVQMEFLGKDSMLFKETIDFDKYKETGRRVFKNLKQFCKGKRQLEDVFDYLDPSILNQHLQSLMPGLTAKVFRTYNASDTLQIKLPDEEALAGLSVAEKVALYNGANRDVAILCNHQRTVSSAQKEGILKQKDQLDLLKKQKYELKQMLKIVKTGKGSVRLQSKDKTTDERAKRXXXXXXXXXANAQTDGEKVAATKAYEAAMVMKKAAAQSKTETSHLFAKTPSEETVAKRIKKWAEKMKKLEIVIRDKDDNKEVSLTTSKINYMDPRVSVAWCKRHEVPVEKVFAKTLRDKFVWAMNVPPDWSF 1031
            ++A +IEQAMK +KWW++     G QW +LEHNG  F P+Y PHGVK+ YDGK+V L +  EEVATF+ASMP DGPQL        F KNFF  FK +L +       IKDF   DFS +R+HLE  K IK+AAT  EKA  K  KEE    Y YAIVD  +EKVGN+N+EPPGLFRGRG HP  GM+K R    +I +N G +  VP C LPG+AW  VQHD  VTWL+ W + VL G KY+MLAASSSFKG+SD+ KYDKA +LK  I RIRRDY   L   +D+  KQIATA+W+IDKLALRVGGEKG+DEADTVGCCSLR EHL F               +E+++EFLGKDSMLFK+TIDF  Y E G++VFKNL+ F K K+  +DVF+ L PS+LN HL SLMPGL+AKVFRTYNAS+TLQ +LP  E LAG+SV +KV  YN ANR VAILCNHQRTV+   +  +   +++L LLK QK EL    +++K+GK +     KD    ++A +           A T  EK+ A+ A + A  +K+ A  +K + +HLFA+ P++E V ++I++W EK+ KLE+ IR+KD+NKEV+L TSKINYMDPR+SVAWCKR EVP+E++FAKTLRDKFVWAM VPP W F
Sbjct:  212 SKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPVDDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPDQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMEKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRF 863          
BLAST of mRNA_C-linearis_contig80.15886.1 vs. uniprot
Match: A0A7S3XV41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV41_HETAK)

HSP 1 Score: 671 bits (1732), Expect = 1.390e-222
Identity = 363/656 (55.34%), Postives = 455/656 (69.36%), Query Frame = 0
Query:  393 FKEMTRAEKIEQAMKTYKWWEEPEKEDGKQWESLEHNGAHFAPEYKPHGVKLKYDGKDVTLTTPQEEVATFYASMPLDGPQLAEQGAD--FNKNFFTDFKAVL-------GNNHRIKDFKLLDFSAMRSHLEIAKQIKRAATDGEKAAAKTAKEELMHKYSYAIVDNHLEKVGNYNVEPPGLFRGRGKHPKTGMLKARVTASDISINCGEEVCVPRCSLPGYAWQSVQHDPSVTWLSKW-DGVLAGTKYMMLAASSSFKGQSDVRKYDKAMKLKGFIERIRRDYTAKLTSSDKRTKQIATAVWVIDKLALRVGGEKGKDEADTVGCCSLRTEHLTFH---EDNSVHEVQMEFLGKDSMLFKETIDFDKYKETGRRVFKNLKQFCKGKRQLEDVFDYLDPSILNQHLQSLMPGLTAKVFRTYNASDTLQIKLPDEEALAGLSVAEKVALYNGANRDVAILCNHQRTVSSAQKEGILKQKDQLDLLKKQKYELKQMLKIVKTGKGS-VRLQS---KDKTTDERAKRXXXXXXXXXANAQTDGEKVAATKAYEAAMVMKKAAAQSKTETSHLFAKTPSEETVAKRIKKWAEKMKKLEIVIRDKDDNKEVSLTTSKINYMDPRVSVAWCKRHEVPVEKVFAKTLRDKFVWAMNVPPDWSF 1031
            FKE TR EK++ AMK +KWWE PE E+G  W  LEHNG  F PE+K HG+KL Y+G+ + L+  QEE+AT YA+MP DGPQL +      F KNF++DFK VL       G N  +  FK  DFS ++ +L   K +K+  TD E+   K  KE  +  + YAIVD HLE+VGN  +EPPGLFRGRGKHPKTG+ K RV    ++IN GE    P+C LPG+AW +VQHDP+VTW++ W + ++   KY+ LAASSSFKG+SD  KY+KA  LKG+I +IR DY   L     R +QIATA+W+ID LALRVGGEKG+DEADTVGCCSLR EHL F    ++   + +++EFLGKDSMLFK+ IDF KY + GRRVFKNL +FC+ K++ EDVFD L P+ILNQHL SLMPGL+AKVFRTYNA++TLQ +LP  EA+AGL+V EKV LYN ANR VAILCNHQRTVS A    +    ++LDLLK Q+ ELK + +++K GK   V LQS   K+K     A+          A A T  EK  A +  E A   + AA + K   SHLF K PS + V  R+  W +K+ KL++ I+D+D+NKEV+L TSKINYMDPRVSVAWCK +EVP+EK+FAKTLRDKF WA  VPPDW F
Sbjct:  171 FKEATRVEKLDLAMKAFKWWEAPELEEGILWRYLEHNGIIFPPEHKVHGIKLLYEGEPLDLSPEQEELATLYAAMPDDGPQLGDPATRPIFQKNFWSDFKQVLDPKGPWKGKNFDVA-FKKFDFSLIKEYLNQQKILKKTQTDSERQKTKDEKEAAVLLHGYAIVDGHLERVGNMMMEPPGLFRGRGKHPKTGLFKRRVFPGQVTINIGENARPPKCPLPGHAWMNVQHDPTVTWMATWNENIMGSNKYVQLAASSSFKGKSDRDKYNKAATLKGYINKIREDYGQNLWKKSHRPRQIATAMWIIDVLALRVGGEKGEDEADTVGCCSLRVEHLRFDTSGDEARKYTLELEFLGKDSMLFKQEIDFGKYGKVGRRVFKNLVEFCQKKKRSEDVFDQLTPTILNQHLSSLMPGLSAKVFRTYNATETLQNELPKPEAMAGLTVQEKVVLYNAANRKVAILCNHQRTVSHAAAAQLENVNERLDLLKVQRKELKDIYRLLKAGKHKRVPLQSDRGKEKVAAAAAR--LKKAKDLKAAASTVEEKKHAIEYEEKAKAKRVAAMKIKQSESHLFVKMPSTKQVKGRVIAWGQKIAKLKLDIKDRDENKEVALGTSKINYMDPRVSVAWCKTNEVPIEKIFAKTLRDKFNWAFAVPPDWRF 823          
BLAST of mRNA_C-linearis_contig80.15886.1 vs. uniprot
Match: A0A7R9YDN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDN3_9STRA)

HSP 1 Score: 667 bits (1720), Expect = 2.300e-222
Identity = 349/645 (54.11%), Postives = 451/645 (69.92%), Query Frame = 0
Query:  392 KFKEMTRAEKIEQAMKTYKWWEEPEKEDGKQWESLEHNGAHFAPEYKPHGVKLKYDGKDVTLTTPQEEVATFYASMPLDGPQLA--EQGADFNKNFFTDFKAVLGNNHRIKDFKLLDFSAMRSHLEIAKQIKRAATDGEKAAAKTAKEELMHKYSYAIVDNHLEKVGNYNVEPPGLFRGRGKHPKTGMLKARVTASDISINCGEEVCVPRCSLPGYAWQSVQHDPSVTWLSKW-DGVLAGTKYMMLAASSSFKGQSDVRKYDKAMKLKGFIERIRRDYTAKLTSSDKRTKQIATAVWVIDKLALRVGGEKGKDEADTVGCCSLRTEHLTFHEDNSVHEVQMEFLGKDSMLFKETIDFDKYKETGRRVFKNLKQFCKGKRQLEDVFDYLDPSILNQHLQSLMPGLTAKVFRTYNASDTLQIKLPDEEALAGLSVAEKVALYNGANRDVAILCNHQRTVSSAQKEGILKQKDQLDLLKKQKYELKQML-KIVKTGKGSVRLQSKDKTTDERAKRXXXXXXXXXANAQTDGEKVAATKAYEAAMVMKKAAAQSKTETSHLFAKTPSEET-VAKRIKKWAEKMKKLEIVIRDKDDNKEVSLTTSKINYMDPRVSVAWCKRHEVPVEKVFAKTLRDKFVWAMNVPPDWSF 1031
            K K +++ E+++ AMK +KWWE P+  +G QW  LEH G  F P+Y PH   + YDG+D+ L    EEVAT+YA +PLDGPQL   E    FNKNF +DF+ VLG+ H I+ F  + ++ +R++    K +KR+ATD EKA  K  K     ++ +A+VD HLEKVGN+ +E PGLFRGRGKHPKTG +K R+    +++N GE    P C +PG+AW +VQHD SVTWL  W + ++   KY+MLAA SS KG+SD  KY KA KLKG IE IRR+Y   L S     +QIATA+W+ID  ALRVGGEKG+DEADTVGCCSLR EH TFHED S  +V +EFLGKDSM FK+TIDF  Y + G +V +NLK+F +GKR+ EDVFD L+P+ILN HLQS+MPGLTAKVFRTYNAS+TLQ +LPD E + GL+V EKV  YN ANR VAILCNHQ+TVSSA +EG+     +L+ LK QK EL  +  K+ K     +RL S +      A            +A+TD E++AATKA + +  +++ AA  K   +HLF + PS+ + V  RI KW EK++K+E+ +R+K DNKEV+L TSKINYMDPR++VAWCKR E+P+E+VFAK LR+KF WAM VPPDW F
Sbjct:   95 KAKYLSKQERVDAAMKAFKWWEHPDHPEGIQWRQLEHAGVAFPPDYVPHNTPITYDGRDIALNAAAEEVATWYADLPLDGPQLGDPEWAPTFNKNFMSDFRKVLGDRHAIRSFDKISWTGLRNYTASKKLVKRSATDDEKAKVKADKLATRSRFGFALVDGHLEKVGNFTIELPGLFRGRGKHPKTGKIKERIPPEQLTLNFGENAPPPICPIPGHAWGAVQHDQSVTWLVTWRENIMEANKYVMLAAMSSLKGKSDRDKYAKAAKLKGHIEAIRRNYRTGLQSKSGGDRQIATAMWLIDIYALRVGGEKGEDEADTVGCCSLRLEHFTFHED-SESQVDLEFLGKDSMRFKQTIDFSTYGDIGMKVLRNLKEFMRGKRKSEDVFDRLNPTILNNHLQSIMPGLTAKVFRTYNASETLQNELPDAEDMEGLTVPEKVVQYNEANRKVAILCNHQKTVSSAAQEGLDALAKKLEDLKSQKRELVAIKNKLAKGETKGIRL-STENAIQASADAAKARADRLRNSAKTDEERIAATKATDESKKLRREAAAVKFSQAHLFKQIPSDVSKVTSRINKWTEKIQKMELQLRNKTDNKEVALGTSKINYMDPRITVAWCKRVELPIERVFAKALREKFNWAMAVPPDWKF 737          
BLAST of mRNA_C-linearis_contig80.15886.1 vs. uniprot
Match: A0A7S2CY07_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY07_9STRA)

HSP 1 Score: 663 bits (1711), Expect = 9.270e-220
Identity = 375/669 (56.05%), Postives = 463/669 (69.21%), Query Frame = 0
Query:  378 SKPKP-VKAQDRAPKKFKEMTRAEKIEQAMKTYKWWEEPEKEDGKQWESLEHNGAHFAPEYKPHGVKLKYDGKDVTLTTPQEEVATFYASMPLDGPQLA--EQGADFNKNFFTDFKAVLGNNHRIKDFKLLDFSAMRSHLEIAKQIKRAATDGEKAAAKTAKEELMHKYSYAIVDNHLEKVGNYNVEPPGLFRGRGKHPKTGMLKARVTASDISINCGEEVCVPRCSLPGYAWQSVQHDPSVTWLSKW-DGVLAGTKYMMLAASSSFKGQSDVRKYDKAMKLKGFIERIRRDYTAKLTSSDKRTKQIATAVWVIDKLALRVGGEKGKDEADTVGCCSLRTEHLTFH-EDNSVHEVQMEFLGKDSMLFKETIDF--DKYKETGRRVFKNLKQFCKGKRQLEDVFDYLDPSILNQHLQSLMPGLTAKVFRTYNASDTLQIKLPDEEALAGLSVAEKVALYNGANRDVAILCNHQRTVSSAQKEGILKQKDQLDLLKKQKYELKQMLKIVKTGKGSVRLQSKDKTTDERA--------KRXXXXXXXXXANAQTDGEKVAATKAYEAAMVMKKAAAQSKTETSHLFAKTPSEETVAKRIKKWAEKMKKLEIVIRDKDDNKEVSLTTSKINYMDPRVSVAWCKRHEVPVEKVFAKTLRDKFVWAMNVPPDWSF 1031
            SKPK  VK++       K+M + E+++QAMK +KWWE  +  DG QW  +EHNG  F PEY+PHGV L Y G+ + L+   EE+ATFYA++P DGPQL   E    F KNFFTDFK +LG +H++++FK  DFS + +++   K I +AATD EKA  K  KEEL  KY +AIVD HLE+VGN   EPP LFRGRGKHP  G +K R T   +S+N  E   VPRC  PG+AW +VQHD SVTWL+ W + +L   KY+MLAA SSFKG+SD  KY KAMKLKG I++IR DY   L + DK ++Q+ATA+WVID LALRVGGEKG DEADTVGCCSLR EHL     +   HE+++EFLGKDSML+KET DF  ++Y +TG++V+KNL QFCKGK+Q + V D L+P  LN+HLQ+LMPGLTAKVFRTYNAS+TLQ +LP    L G +V EKV  YN ANR VAILCNHQRTVS A +  +    ++L LL++QK EL  +LK +K G G+++   K K   ++A          XXXXXXXXX                      + AAA      SHLFAK PSEE V KRI  W EK++KLE+ IR+KDDNKEV+L TSKINY DPR++VAW KR EVPVE+VF KTLRDKFVWAM VPPDWSF
Sbjct:  163 SKPKKEVKSEKGTRGALKQMNKMERLDQAMKAFKWWEHEDLPDGVQWLGMEHNGLAFPPEYEPHGVPLLYKGEPIELSPELEELATFYAAVPDDGPQLGDPETRTIFQKNFFTDFKKMLGKSHKVQEFKHCDFSRIAANIAEQKMINKAATDVEKANKKREKEELQFKYGFAIVDKHLERVGNTMCEPPSLFRGRGKHPLMGKVKQRCTTEQVSLNLAETTTVPRCPQPGHAWGAVQHDNSVTWLATWHENILGKNKYVMLAAQSSFKGKSDRDKYLKAMKLKGSIKKIRADYKKNLDAKDKFSRQLATAMWVIDVLALRVGGEKGDDEADTVGCCSLRVEHLHCGLPEQGPHEIELEFLGKDSMLYKETTDFGREEYGDTGKKVYKNLIQFCKGKKQEQQVLDLLNPPELNRHLQTLMPGLTAKVFRTYNASETLQNELPSPSDLQGKTVPEKVLAYNEANRKVAILCNHQRTVSKAMQTNMSVLGERLKLLQRQKVELGSLLKQIKKG-GNIKSSQKSKDMGKQAVDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAAAG----SHLFAKVPSEEQVKKRIDVWREKIRKLELDIRNKDDNKEVALGTSKINYCDPRITVAWLKRTEVPVERVFPKTLRDKFVWAMPVPPDWSF 826          
BLAST of mRNA_C-linearis_contig80.15886.1 vs. uniprot
Match: A0A7S1TRD4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRD4_9STRA)

HSP 1 Score: 640 bits (1652), Expect = 4.210e-214
Identity = 336/610 (55.08%), Postives = 426/610 (69.84%), Query Frame = 0
Query:  426 LEHNGAHFAPEYKPHGVKLKYDGKDVTLTTPQEEVATFYASMPLDGPQLA--EQGADFNKNFFTDFKAVLGNNHRIKDFKLLDFSAMRSHLEIAKQIKRAATDGEKAAAKTAKEELMHKYSYAIVDNHLEKVGNYNVEPPGLFRGRGKHPKTGMLKARVTASDISINCGEEVCVPRCSLPGYAWQSVQHDPSVTWLSKW-DGVLAGTKYMMLAASSSFKGQSDVRKYDKAMKLKGFIERIRRDYTAKLTSSDKRTKQIATAVWVIDKLALRVGGEKGKDEADTVGCCSLRTEHLTFHEDNSVHEVQMEFLGKDSMLFKETIDFDKYKETGRRVFKNLKQFCKGKRQLEDVFDYLDPSILNQHLQSLMPGLTAKVFRTYNASDTLQIKLPDEEALAGLSVAEKVALYNGANRDVAILCNHQRTVSSAQKEGILKQKDQLDLLKKQKYELKQMLKIVKTGKGSVRLQSKDKTTDERAKRXXXXXXXXXANAQTDGEKVAATKAYEAAMVMKKAAAQSKTETSHLFAKTPSE-ETVAKRIKKWAEKMKKLEIVIRDKDDNKEVSLTTSKINYMDPRVSVAWCKRHEVPVEKVFAKTLRDKFVWAMNVPPDWSF 1031
            +EH GA F PEY  H + L YDG++V L+   EEVAT+YA +PLDGPQL   E    FNKNF TDFK +LG  HRIKDF  +D+S +RS+    K +KR+ATD EKA  K  K+    ++  A+VD HLEKVGN+ +E PGLFRGRGKHPKTG +K RV    +S+N GEE  VP C + G+ W +VQHDPSVTWL  W + ++   KY+MLAA SS KG+SD  KY KA KLKG+I  IR +Y   L S     +Q+ATA+W+ID  ALRVGGEKG+DEADTVGCCSLR EH TF   +    V +EFLGKDSM FK+TIDF  Y   G +V +N+K FCKGKR+ EDVF++L+PS+LN HLQS+MPGLTAKVFRTYNAS+TLQ +LP  E +  L   EKV  YN ANR VAILCNHQ+TVS+AQ+EG+   + ++ +LKKQK EL+ M K ++ G  S    + D     RA+           +A+TD +++ ATKA E    ++K AA  K + +HLF   PS+ + V  RI  W EK++K E+ +++K DNKEV+L TSKINYMDPR++VAWCKR E+P+E+VFA+TLRDKF WAM VPPDW F
Sbjct:    1 MEHAGASFPPEYVQHRMPLTYDGEEVQLSKAAEEVATWYAELPLDGPQLGDPEWAPTFNKNFMTDFKKILGKGHRIKDFNKIDWSGLRSYTTSKKLVKRSATDEEKAEVKAEKQATQAQFGLALVDGHLEKVGNFTIELPGLFRGRGKHPKTGKVKQRVLPEQLSLNFGEEAAVPICPIDGHGWGAVQHDPSVTWLVTWRENIMEANKYVMLAAMSSLKGKSDRDKYGKASKLKGYIGAIRDNYRGNLQSRSGEERQMATAMWLIDIYALRVGGEKGEDEADTVGCCSLRVEHFTFSTQSET-AVDLEFLGKDSMRFKQTIDFANYGNVGLKVLRNIKDFCKGKRKNEDVFEFLNPSMLNAHLQSIMPGLTAKVFRTYNASETLQNELPSAEDMRRLQDPEKVVAYNEANRKVAILCNHQKTVSAAQQEGLDALQGKVAMLKKQKRELQAMKKKIEAGDTSSVRTANDVALVARAEAAKAKAEKLRNSAKTDEQRIKATKATEEWRELRKRAAAEKFKQAHLFKNVPSDPKKVQARIVTWTEKIRKQELTLQNKSDNKEVALGTSKINYMDPRITVAWCKRVELPIERVFARTLRDKFNWAMAVPPDWRF 609          
BLAST of mRNA_C-linearis_contig80.15886.1 vs. uniprot
Match: A0A1Z5KFS1_FISSO (DNA topoisomerase I n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFS1_FISSO)

HSP 1 Score: 632 bits (1630), Expect = 1.890e-208
Identity = 351/682 (51.47%), Postives = 461/682 (67.60%), Query Frame = 0
Query:  379 KPKPVKAQDRAPKK-----FKEMTRAEKIEQAMKTYKWWEEPEKEDGKQWESLEHNGAHFAPEYKPHGVKLKYDGKDVTLTTPQEEVATFYASMPLDGPQLAEQGAD--FNKNFFTDFKAVLGNNHRIKDFKLLDFSAMRSHLEIAKQIKRAATDGEKAAAKTAKEELMHKYSYAIVDNHLEKVGNYNVEPPGLFRGRGKHPKTGMLKARVTASDISINCGEEVCVPRCSLPGYAWQSVQHDPSVTWLSKW-DGVLAGTKYMMLAASSSFKGQSDVRKYDKAMKLKGFIERIRRDYTAKLTSSDKRTKQIATAVWVIDKLALRVGGEKGKDE-ADTVGCCSLRTEHLTFH---EDNSVHEVQMEFLGKDSMLFKETIDFDK--YKET---GRRVFKNLKQFCKGKRQLEDVFDYLDPSILNQHLQSLMPGLTAKVFRTYNASDTLQIKLPDEEALA---GLSVAEKVALYNGANRDVAILCNHQRTVSSAQKEGILKQKDQLDLLKKQKYELKQMLKIVKTGKGS---VRLQSKDKTTD-----ERAKRXXXXXXXXXANAQTDGEKVAATKAYEAAMVMKKAAAQSKTETSHLFAKTPSEETVAKRIKKWAEKMKKLEIVIRDKDDNKEVSLTTSKINYMDPRVSVAWCKRHEVPVEKVFAKTLRDKFVWAMNVPPDWSFS 1032
            KP   K+ D A KK      K++ +AE+++ AM+++ WW+  E  +G QW ++EH+G  F  EY PHG+K+KYDGKDV LT  QEE ATF+A+M  +G  L +      F KN+F DF  VLG  H IKDFK  DF  +R HL   K IK+A TD ++ A K  + ++M ++ YAIVD H+EKVGNYN+EPPG FRGRG+HPK G LK RV    +S+N  +   VPRCS+PG+AW  ++HDP   WL+ W + +   +KYM LAA SSFKG+SD  KY+KA  L   IE+IR+ Y   L S D+ TKQ+ATAVWVID+LALRVGGEK  DE ADTVGCCSLR EHL F    E     E+++EFLGKDSML+K+TIDF    Y E    G +V++N K FCK K+  ++VFD ++P++LNQHL++ M GL+AKVFRTYNAS TLQ +L   EA +    L+  EKV  YN ANR+VAILCNHQR+VS AQ+  +     +L  LKKQK +LKQMLK + +G  S   VR   ++   D     E+AK+           A+T+ EK+AAT+A E A   K+  A  K + +HL+ K P+++ + KRI+ W  K+ K+E+ ++ KDDNKEVSL TSKINYMDPR+SVA+CKR+EVP+EK+F+KTLRDKF WAM V PDW F+
Sbjct:   95 KPDKPKSDDTAMKKTAIKALKKLDKAERLQYAMQSFLWWDSVEPPEGCQWRTMEHSGVSFPEEYVPHGIKMKYDGKDVDLTPAQEEAATFFAAMDPEGMHLGDPKTAKIFIKNYFADFLEVLGKKHIIKDFKKCDFEPIRRHLNEQKIIKKAITDEQRKANKDDRNQVMFRFGYAIVDGHIEKVGNYNMEPPGTFRGRGEHPKMGKLKQRVAPEQVSLNLSQCAAVPRCSVPGHAWGDIKHDPRGQWLATWKENINNQSKYMQLAAQSSFKGKSDRSKYNKAALLCSNIEKIRKSYKKDLKSKDQETKQLATAVWVIDRLALRVGGEKDTDEEADTVGCCSLRVEHLEFDPNGEGGVNREIKLEFLGKDSMLYKQTIDFGATMYNENNGMGEQVYENFKSFCKKKKPDQEVFDSINPTLLNQHLKTFMDGLSAKVFRTYNASKTLQDELRKHEAGSQWKNLTATEKVVEYNNANREVAILCNHQRSVSKAQETALEAIGSKLATLKKQKKDLKQMLKKLNSGDSSGLPVRKSFEEMAEDVQKAVEKAKKMKEA-------AKTNEEKIAATQADEKAKQKKRDLADKKFQKAHLWEKVPTKDQLVKRIEAWTAKINKMEMDLKHKDDNKEVSLGTSKINYMDPRISVAFCKRNEVPIEKIFSKTLRDKFNWAMAVQPDWEFN 769          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G042_ECTSI0.000e+075.98TOPEUc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JUC6_9PHAE8.790e-30877.85TOPEUc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S2WTQ7_9STRA5.700e-23457.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836C9X0_9STRA3.090e-22954.40DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=... [more]
A0A4D9D5J1_9STRA3.060e-22755.83TOPEUc domain-containing protein n=2 Tax=Monodopsi... [more]
A0A7S3XV41_HETAK1.390e-22255.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9YDN3_9STRA2.300e-22254.11Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2CY07_9STRA9.270e-22056.05Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1TRD4_9STRA4.210e-21455.08Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1Z5KFS1_FISSO1.890e-20851.47DNA topoisomerase I n=2 Tax=Fistulifera solaris Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 890..917
NoneNo IPR availableCOILSCoilCoilcoord: 958..978
NoneNo IPR availableCOILSCoilCoilcoord: 321..341
NoneNo IPR availablePANTHERPTHR10290DNA TOPOISOMERASE Icoord: 74..1031
NoneNo IPR availablePANTHERPTHR10290:SF3DNA TOPOISOMERASE 1coord: 74..1031
IPR001631DNA topoisomerase IPRINTSPR00416EUTPISMRASEIcoord: 727..743
score: 37.61
coord: 679..698
score: 55.36
coord: 791..805
score: 77.14
coord: 565..574
score: 68.93
coord: 702..716
score: 69.05
coord: 984..995
score: 61.31
IPR013499DNA topoisomerase I, eukaryotic-typeSMARTSM00435topeucoord: 565..1004
e-value: 8.7E-177
score: 603.3
IPR008336DNA topoisomerase I, DNA binding, eukaryotic-typePFAMPF02919Topoisom_I_Ncoord: 422..634
e-value: 2.2E-75
score: 252.8
IPR025834Topoisomerase I C-terminal domainPFAMPF14370Topo_C_assoccoord: 963..1031
e-value: 1.3E-33
score: 114.8
IPR013500DNA topoisomerase I, catalytic core, eukaryotic-typePFAMPF01028Topoisom_Icoord: 637..873
e-value: 1.1E-84
score: 283.3
IPR014727DNA topoisomerase I, catalytic core, alpha/beta subdomainGENE3D1.10.132.10coord: 969..1031
e-value: 6.4E-29
score: 101.3
IPR014727DNA topoisomerase I, catalytic core, alpha/beta subdomainGENE3D1.10.132.10coord: 795..923
e-value: 7.6E-24
score: 86.4
IPR013030DNA topoisomerase I, DNA binding, N-terminal domain 2GENE3D2.170.11.10coord: 410..634
e-value: 3.6E-78
score: 264.1
IPR013034DNA topoisomerase I, DNA binding, N-terminal domain 1GENE3D1.10.10.41coord: 438..524
e-value: 3.6E-78
score: 264.1
IPR014711DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-typeGENE3D3.90.15.10coord: 637..794
e-value: 2.5E-55
score: 188.7
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 637..1029
IPR036202DNA topoisomerase I, DNA binding, eukaryotic-type, N-terminal domain superfamilySUPERFAMILY56741Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragmentcoord: 408..635

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:443818..452334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15886.1mRNA_C-linearis_contig80.15886.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 443607..454107 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15886.1 ID=prot_C-linearis_contig80.15886.1|Name=mRNA_C-linearis_contig80.15886.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1231bp
MSKAAPAAPEKVGVPPSSLPRQADGVSISSAVGNGDVGHKAAASVGAKIG
STAATEGGGNGSSNGSRQPTASSSTQQQPKKRRVIEDDDDDDYDPPAARK
PRPSPAPSGSRGAVGSRSGGAAAVGAAKPSGLNGSSSSHSGEKKKIVAGP
PSSAAGKGPSSKPASAGAGAGRKGNDNDDDVDDDTPYGSMLKKQPKPSSS
GASGSSGGANNAIPKKIPSKNGVKSEPKSFTIPKRGGASGSPRAPSQGAA
ASSGNKKIIRSSSSSSSSSRPAGMGSKRPASSSSSSSSTRRNHDDDDDDF
EQKPVKLKKRPEDFTRDPHSKSSQKRKLEEQRAKDEALKKKRRDSQGSSS
KVKVKADPGRRGSSSSTPRSRGGGGGGSKPKPVKAQDRAPKKFKEMTRAE
KIEQAMKTYKWWEEPEKEDGKQWESLEHNGAHFAPEYKPHGVKLKYDGKD
VTLTTPQEEVATFYASMPLDGPQLAEQGADFNKNFFTDFKAVLGNNHRIK
DFKLLDFSAMRSHLEIAKQIKRAATDGEKAAAKTAKEELMHKYSYAIVDN
HLEKVGNYNVEPPGLFRGRGKHPKTGMLKARVTASDISINCGEEVCVPRC
SLPGYAWQSVQHDPSVTWLSKWDGVLAGTKYMMLAASSSFKGQSDVRKYD
KAMKLKGFIERIRRDYTAKLTSSDKRTKQIATAVWVIDKLALRVGGEKGK
DEADTVGCCSLRTEHLTFHEDNSVHEVQMEFLGKDSMLFKETIDFDKYKE
TGRRVFKNLKQFCKGKRQLEDVFDYLDPSILNQHLQSLMPGLTAKVFRTY
NASDTLQIKLPDEEALAGLSVAEKVALYNGANRDVAILCNHQRTVSSAQK
EGILKQKDQLDLLKKQKYELKQMLKIVKTGKGSVRLQSKDKTTDERAKRA
EEKAKKAKANAQTDGEKVAATKAYEAAMVMKKAAAQSKTETSHLFAKTPS
EETVAKRIKKWAEKMKKLEIVIRDKDDNKEVSLTTSKINYMDPRVSVAWC
KRHEVPVEKVFAKTLRDKFVWAMNVPPDWSFSYETLFNSKQSTLDVPPPP
GDRKKKSTAATPSATRTPPKAAAAVAKPAAVKAEAKPPANPPSEAKGKGK
ANQEEEEEEEEEEVDSSSSGEEESGSEGESGEEESSSGDGSGSSSGEEES
GSSSGEEDGSSESGDEDSSDNDDDDEEEEEEASSKKRRSSGGGGSGGAAK
KTRRPTIEDDDEEEEEEEEEENDDDSDFEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001631TopoI
IPR013499TopoI_euk
IPR008336TopoI_DNA-bd_euk
IPR025834TopoI_C_dom
IPR013500TopoI_cat_euk
IPR014727TopoI_cat_a/b-sub_euk
IPR013030DNA_topo_DNA_db_N_dom2
IPR013034DNA_topo_DNA_db_N_dom1
IPR014711TopoI_cat_a-hlx-sub_euk
IPR011010DNA_brk_join_enz
IPR036202TopoI_DNA-bd_euk_N_sf