prot_C-linearis_contig80.15875.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15875.1
Unique Nameprot_C-linearis_contig80.15875.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length326
Homology
BLAST of mRNA_C-linearis_contig80.15875.1 vs. uniprot
Match: A0A6H5JW72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW72_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 1.130e-100
Identity = 173/289 (59.86%), Postives = 204/289 (70.59%), Query Frame = 0
Query:   43 MAARVTSAAVMTAPAMKRSRILKNMSAVSGAMMLG---DAVCQGMETFDSGAKFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSLRAIVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDLSDAYQKLSRDFMPTLKNAVLFWPLVSVVNSAFVPVLSRPIFSSFMGVFWNVYISYQANHNGMEVGEMSVVFPRSSQEQRQQEEAVALVKEALA---KTAVVAAVASDAKRPGVAANSVTAPVVAGEGKPEAPSESEGGAATDATPPGRKRRGRVVRRTSVVSM 325
            MA R+ SAA+  +PA+K  RI+KN+  VSGAMMLG   DA+CQ METF +  KF+WDH RTMRMGITGAF VTPASF+WN+YAER+APG SLRA++TKLGVS+AVLPPMLAAQF SLTLLE+ K + D   KLSRDF PTLKNA+LFWP+VSV+NS FVPVLSRP+FSSF+GVFWNVYISYQANHNGMEVGE+SVV+P   +E+ ++E AV     A+A   K A                                  E+ GG       P RK+RGR VRRTSVVSM
Sbjct:    1 MAVRLPSAAMKASPALKGERIVKNLVCVSGAMMLGKDGDALCQAMETFGTERKFAWDHTRTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVMTKLGVSVAVLPPMLAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPAEQKEEGEEEAAVVTGAAAIALAEKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGETAGGEERVPAEPARKKRGRFVRRTSVVSM 289          
BLAST of mRNA_C-linearis_contig80.15875.1 vs. uniprot
Match: D7G038_ECTSI (Integral membrane protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G038_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 8.160e-85
Identity = 154/258 (59.69%), Postives = 176/258 (68.22%), Query Frame = 0
Query:   84 METFDSGAKFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSLRAIVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDLSDAYQKLSRDFMPTLKNAVLFWPLVSVVNSAFVPVLSRPIFSSFMGVFWNVYISYQANHNGMEVGEMSVVFPRSSQEQRQQEEAVALVKEALAKTAVVAAVASDAKRPGVAANSVTAPVVAGEGKPEAPSESE----------------GGAATDATPPGRKRRGRVVRRTSVVSM 325
            METF +  KF+WDHARTMRMGITGAF VTPASF+WN+YAER+APG SLRA+VTKLGVS+AVLPPMLAAQF SLTLLE+ K + D   KLSRDF PTLKNA+LFWP+VSV+NSAFVPVLSRP+FSSF+GVFWNVYISYQANHNGMEVGE+SVV+P    EQ+++EEA +    A    AVV   A+ A     A                                      GG       P RK+RGR VRRTSVVSM
Sbjct:    1 METFGTERKFAWDHARTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVVTKLGVSVAVLPPMLAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSAFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPT---EQKEEEEAASRQDAATLGRAVVVGSAAVALAEKAAEKQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEEGVPAEPARKKRGRFVRRTSVVSM 255          
BLAST of mRNA_C-linearis_contig80.15875.1 vs. uniprot
Match: A0A2R5FZK7_9STRA (DNA-3-methyladenine glycosylase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZK7_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 7.860e-15
Identity = 58/172 (33.72%), Postives = 90/172 (52.33%), Query Frame = 0
Query:   58 MKRSRILKNMSAVSGAMMLGDAVCQGMETFDSGAKFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSLRAIVTK-LGVSIAVLPPMLAAQFTSLTLLE-----KDKDLSDAYQKLSRDFMPTLKNAVLFWPLVSVVNSAFVPVLSRPIFSSFMGVFWNVYISYQAN 223
            M RS +L     +  +M  GD +CQ +     G   +W   R+      G F+  P SFS+ ++ ER+ PGTS   IV K L  S       L   FT++TLL+     + + L DA +K++ D +PT     L+WP+ +++   +VP L R + SS +GV WN+Y++  AN
Sbjct:   41 MARSVVL-----IGASMGTGDILCQMIL---EGHVTNWP--RSAVFAFIGTFITGPVSFSFQMFLERMVPGTSGAQIVKKTLCNSTFAFCVSLPIMFTAVTLLQPGPNGERRSLEDARRKIAGDLVPTFMAGSLYWPVFNMLVYRYVPTLHRAVASSLIGVVWNIYLAMVAN 202          
BLAST of mRNA_C-linearis_contig80.15875.1 vs. uniprot
Match: A0A0D3E2X1_BRAOL (Uncharacterized protein n=11 Tax=Brassiceae TaxID=981071 RepID=A0A0D3E2X1_BRAOL)

HSP 1 Score: 79.3 bits (194), Expect = 1.570e-13
Identity = 45/166 (27.11%), Postives = 77/166 (46.39%), Query Frame = 0
Query:   58 MKRSRILKNMSAVSGAMMLGDAVCQGMETFDSGAKFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSLRAIVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDLSDAYQKLSRDFMPTLKNAVLFWPLVSVVNSAFVPVLSRPIFSSFMGVFWNVYISYQAN 223
            M +SR +   S  S  + +  A     +T    +  S+D  RT RMG  G  ++ P    W  +  R+ P         K+ +   +  P++   F SL  L + +  SD   +L RDF+P ++N V++WP+   +   F PV  +P+ S+     W +Y++Y  N
Sbjct:   74 MVKSRPVLTKSVTSSLIYI--AADLSSQTIAKKSSDSYDLVRTARMGGYGLCVLGPTLHCWFNFMSRLLPRQDFITTFKKMAMGNIIYGPVMMVTFFSLNALLQGEGGSDIVARLKRDFLPAMRNCVMYWPICDFITFKFFPVHLQPLVSNAFSYLWTIYMTYMGN 237          
BLAST of mRNA_C-linearis_contig80.15875.1 vs. uniprot
Match: A0A078A122_STYLE (Sym1p n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A122_STYLE)

HSP 1 Score: 73.9 bits (180), Expect = 1.410e-11
Identity = 46/164 (28.05%), Postives = 80/164 (48.78%), Query Frame = 0
Query:   58 MKRSRILKNMSAVSGAMMLGDAVCQGMETFDSGAKFSWDHARTMRMGITGAFLVTPAS-FSWNLYAERIAPGTSLRAIVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDLSDAYQKLSRDFMPTLKNAVLFWPLVSVVNSAFVPVLSRPIFSSFMGVFWNVYISY 220
            ++R  +   M   +  + LGD +CQ +E   S  K  +D +R +R+   G F+  P   F +     +I PG SL++++ K+  +  +      + F   T +        +  ++S+   PT   ++  WPL+SV+N AFVP   +  F +   VFWN Y+SY
Sbjct:   12 LQRKPLFTKMVTSAALIGLGDGLCQMIEQKLSVEKSKFDVSRNLRLITYGFFMSGPIMHFVYTKILPKIGPGCSLKSVLIKVMFTQTIFTIFGLSLFFFSTSMMSGHTFEHSINQVSKKLWPTYCTSLKIWPLISVLNFAFVPPHFQVFFVNVFSVFWNAYLSY 175          
BLAST of mRNA_C-linearis_contig80.15875.1 vs. uniprot
Match: A0A044SV73_ONCVO (Uncharacterized protein n=1 Tax=Onchocerca volvulus TaxID=6282 RepID=A0A044SV73_ONCVO)

HSP 1 Score: 72.0 bits (175), Expect = 2.310e-11
Identity = 40/124 (32.26%), Postives = 69/124 (55.65%), Query Frame = 0
Query:   98 ARTMRMGITGAFLVTPASFSWNLYAERIAPGTSLRAIVTKLGVSIAVLPPMLAAQF-TSLTLLEKDKDLSDAYQKLSRDFMPTLKNAVLFWPLVSVVNSAFVPVLSRPIFSSFMGVFWNVYISY 220
            ART+R      F V P ++ W L  E++   T L  +  ++ +  +++ P+L   F T+L +LE +    +A +K  +D +P +K     WPL  ++N   +P+  R IF  F+G+FWN+Y+SY
Sbjct:   52 ARTIRFSSIILFWVAPITYRWFLLLEKLKGETKLLPL-KRMIIDQSLVAPLLTFSFITNLRMLEGNSSY-EALEKAKKDIVPVMKTNYQIWPLAQLINFYLLPLRYRLIFVQFVGLFWNMYLSY 173          
BLAST of mRNA_C-linearis_contig80.15875.1 vs. uniprot
Match: A0A1D2NCD3_ORCCI (Protein Mpv17 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NCD3_ORCCI)

HSP 1 Score: 70.9 bits (172), Expect = 5.750e-11
Identity = 42/158 (26.58%), Postives = 76/158 (48.10%), Query Frame = 0
Query:   72 GAMMLGDAVCQGMETFDSGAKFSWDHARTMRMGITGAFLVTPASFSW-NLYAERIA-PGTSLRAIVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDLSDAYQKLSRDFMPTLKNAVLFWPLVSVVNSAFVPVLSRPIFSSFMGVFWNVYISYQANHNGM 227
            G M LGD + Q +       K  +D  R +R G+ G  ++ P   +W  +   RI+   + L   V K+GV   +  P+  A F  +  L +   L+     ++++F   + +    WP V +++ + VP+  R +F   + VFWN Y+S++ N  G+
Sbjct:   25 GLMCLGDGISQTLVE----KKDKFDLNRNIRFGMLGLCIIGPTLRTWYGILDRRISIKASKLGTAVAKMGVDQGIFAPIFLANFLGINSLMQGNSLNQMKNDITKNFTDVVISNYKLWPAVQLISFSVVPLQYRVLFVQTVAVFWNTYLSWKTNSEGI 178          
BLAST of mRNA_C-linearis_contig80.15875.1 vs. uniprot
Match: A0A165RUY1_9AGAM (Uncharacterized protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165RUY1_9AGAM)

HSP 1 Score: 69.7 bits (169), Expect = 1.540e-10
Identity = 47/126 (37.30%), Postives = 69/126 (54.76%), Query Frame = 0
Query:   96 DHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSLRAIVTKLGVSIAVLPPMLAAQFT-SLTLLEKDKDLSDAYQKLSRDFMPTL-KNAVLFWPLVSVVNSAFVPVLSRPIFSSFMGVFWNVYIS 219
            D  RT R+   G  L  P    W  +  ++   T  R I+ K+ +  AVL P++ A F  S+TLLE  K LSDA ++LS  ++PTL +N  +F P    +N A +P   R +F S + +FWN Y+S
Sbjct:   47 DWIRTARLSFYGGALFGPVITKWYQFLNKLQFATPTRGIIYKVWLDQAVLSPVIVAYFFGSMTLLE-GKPLSDAGERLSTAYVPTLIRNWGVFVP-AQAINFAVIPPHMRFVFVSVVSLFWNTYLS 170          
BLAST of mRNA_C-linearis_contig80.15875.1 vs. uniprot
Match: A0A4S4N266_9APHY (HIT domain-containing protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4N266_9APHY)

HSP 1 Score: 68.9 bits (167), Expect = 1.660e-9
Identity = 51/165 (30.91%), Postives = 85/165 (51.52%), Query Frame = 0
Query:   57 AMKRSRILKNMSAVSGAMMLGDAVCQGMETFDSGAKFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSLRAIVTKLGVSIAVLPPMLAAQFT-SLTLLEKDKDLSDAYQKLSRDFMPTL-KNAVLFWPLVSVVNSAFVPVLSRPIFSSFMGVFWNVYIS 219
            A+KR  +L   +        GD + Q  +  +     + D AR+ R+G  G FL  P    W  + +R+   T LR ++ K  +   +L P + A F  S+TLLE  K +S+A +++S +++PTL +N  +F P    +N  +VP   R +F   + +FWN Y+S
Sbjct:  147 ALKRRPMLYQCATAGVLYTSGDIIAQ--QLIEKRGLRNHDIARSARLGFYGGFLFGPIITKWLQFLQRLEFKTPLRGVLYKTYLDQGLLTPAVVAFFFGSMTLLE-GKGISEATERISDNYVPTLIRNWGVFIP-AQAINFTYVPPHLRFVFVGVVSLFWNTYLS 307          
BLAST of mRNA_C-linearis_contig80.15875.1 vs. uniprot
Match: A0A5C3MTM0_9AGAM (Uncharacterized protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3MTM0_9AGAM)

HSP 1 Score: 65.5 bits (158), Expect = 4.850e-9
Identity = 46/126 (36.51%), Postives = 68/126 (53.97%), Query Frame = 0
Query:   96 DHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSLRAIVTKLGVSIAVLPPMLAAQFT-SLTLLEKDKDLSDAYQKLSRDFMPTL-KNAVLFWPLVSVVNSAFVPVLSRPIFSSFMGVFWNVYIS 219
            D  RT R+   G  L  P    W  +  ++   T  + I+ K+ +  AVL P + A F  S+TLLE  K LS+A ++LS  ++PTL +N  +F P    +N A VP   R +F S + +FWN Y+S
Sbjct:   47 DFMRTARLSFYGGALFGPIITKWYQFLNKLQFSTPTKGIIYKVWLDQAVLSPAVVAYFFGSMTLLE-GKPLSEAGERLSSAYVPTLIRNWGVFVP-AQALNFAVVPPHMRFVFVSVVSLFWNTYLS 170          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5JW72_9PHAE1.130e-10059.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G038_ECTSI8.160e-8559.69Integral membrane protein-like protein n=1 Tax=Ect... [more]
A0A2R5FZK7_9STRA7.860e-1533.72DNA-3-methyladenine glycosylase 1 n=1 Tax=Hondaea ... [more]
A0A0D3E2X1_BRAOL1.570e-1327.11Uncharacterized protein n=11 Tax=Brassiceae TaxID=... [more]
A0A078A122_STYLE1.410e-1128.05Sym1p n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=... [more]
A0A044SV73_ONCVO2.310e-1132.26Uncharacterized protein n=1 Tax=Onchocerca volvulu... [more]
A0A1D2NCD3_ORCCI5.750e-1126.58Protein Mpv17 n=1 Tax=Orchesella cincta TaxID=4870... [more]
A0A165RUY1_9AGAM1.540e-1037.30Uncharacterized protein n=1 Tax=Neolentinus lepide... [more]
A0A4S4N266_9APHY1.660e-930.91HIT domain-containing protein n=1 Tax=Antrodiella ... [more]
A0A5C3MTM0_9AGAM4.850e-936.51Uncharacterized protein n=1 Tax=Heliocybe sulcata ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 158..219
e-value: 6.4E-16
score: 58.3
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 54..247
NoneNo IPR availablePANTHERPTHR11266:SF17PROTEIN MPV17coord: 54..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 123..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 180..201
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..179
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 202..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:379346..382470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15875.1mRNA_C-linearis_contig80.15875.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 379346..382470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15875.1 ID=prot_C-linearis_contig80.15875.1|Name=mRNA_C-linearis_contig80.15875.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=326bp
TFLPLSRRFSFAPKLITYAAGQPDASPLISPISLCHPRDTTAMAARVTSA
AVMTAPAMKRSRILKNMSAVSGAMMLGDAVCQGMETFDSGAKFSWDHART
MRMGITGAFLVTPASFSWNLYAERIAPGTSLRAIVTKLGVSIAVLPPMLA
AQFTSLTLLEKDKDLSDAYQKLSRDFMPTLKNAVLFWPLVSVVNSAFVPV
LSRPIFSSFMGVFWNVYISYQANHNGMEVGEMSVVFPRSSQEQRQQEEAV
ALVKEALAKTAVVAAVASDAKRPGVAANSVTAPVVAGEGKPEAPSESEGG
AATDATPPGRKRRGRVVRRTSVVSM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22