prot_C-linearis_contig80.15871.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15871.1
Unique Nameprot_C-linearis_contig80.15871.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length883
Homology
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BLAST of mRNA_C-linearis_contig80.15871.1 vs. uniprot
Match: D7FS02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS02_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 2.410e-95
Identity = 226/473 (47.78%), Postives = 273/473 (57.72%), Query Frame = 0 
Query:  255 AGQKAGLRLERQGGDTEKIRLDLEKGLSEEFKSLRRENEVLRRETAHKDSEINRIMKNAALIESDKRAARAELDDERRVHHTTIRKKKRAEATIAELQAQLSMALSSASGRPFSPSNINLSQRRPKKHWGTPR-PPAPGRGKLLVR---ESDDRGGGYREVLPGGGK---------KGVSKVSTFLVPARKSEAEEKGGDQ-------------EKAXXXXXXXXXXXXXXXXAARIRDPEKPLGRGRE--KERPANKGLGPASVGEE--------------------EQGGG------------------DIPELLPCGSGSEVTTGDVWGMLGSYVHRRSEVARANRHLGAIEAMRRHLEKNNKRACNPTASNYCSATTATVQYDYRGRRRVRMGGENHKRNS--DEAVWRVSRRKRARQEDRLSEAFAVETRRPHSKKAVGAKQTKPRVRLQPHPPPRCKRDGSVSSISQ 659
            AGQKA LRL R   D EKIRLDLE+GLSEEF+SLRRE EVLRRE AHKDSEINRIM+ AA IE D+R A  EL DERR+H TTIR++KRAEA I  LQAQL++AL+ ASGRP+ PSN   S    KK W +PR P A GRGK +V    E D R G + E LPG G          + VSKVS  LVP R  + +E+G ++               A                +A   D E P+  G     ERP  +    ASVGE+                    E G G                  +IPEL+ CGSG+E+++GDVWGML SYVHRRSEVARA RHLG IEAMR+HLEK+N R  NPT SN C++ TA      RG RRVR+GG+    +   DEAVW+ SR KR+ Q+ +  +      RR  + KAV     +PRVR +P PPPRCKRD S +S+SQ
Sbjct:    2 AGQKAQLRLAR---DAEKIRLDLERGLSEEFRSLRRETEVLRREKAHKDSEINRIMRKAAQIERDQRTAGVELADERRMHQTTIRRRKRAEAVINNLQAQLTVALAPASGRPYPPSNSCASPHPSKKPWNSPRRPAAQGRGKNIVHQCDEGDGRDGAHGETLPGAGPENGPGPGTGRSVSKVSMLLVPPRTPQEQEEGQEEIGGWNSERVATGFVAAAAAANGGVAQEAAARGSASRADLELPVENGGNGNSERPTYRNG--ASVGEKSGLVTSGGRAVRGHHECGRTESGSGGVRVGGGXXXXXXGEEGDEIPELIACGSGTEISSGDVWGMLDSYVHRRSEVARAKRHLGVIEAMRKHLEKSNARRGNPTGSN-CNSITARDNQG-RGLRRVRVGGDETTCSGQVDEAVWKASRPKRSWQDRQSDDTSCTNGRRARNNKAVYTTPRRPRVRFKPRPPPRCKRDESETSVSQ 467
[Close]
BLAST of mRNA_C-linearis_contig80.15871.1 vs. uniprot
Match: D7FS03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS03_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 1.330e-31
Identity = 83/124 (66.94%), Postives = 100/124 (80.65%), Query Frame = 0 
Query:   54 LVVGEKATKLPRAEAGAGRDPARRESADSVVEEESSTEADRDRQLFGLAELVQAEIERAAEAQVVEHLKQRTARALNEVAVLRHELERTEAAVVGGKKKRDSDVAERESQLRRCQEEIRRLESE 177
            +VVGEKAT   RAE GAG + A  ES D +V+EE+S +A + +QL  LAELVQAEI+RAA+AQV+EHLK+RTA A  E + LR ELERTEAAVVGGKKKRD DVAERE+QL+  +EEIRRLE+E
Sbjct:    1 MVVGEKATASARAE-GAGPNQASEESEDPIVDEEASKQAAKKQQLTELAELVQAEIDRAAKAQVLEHLKERTAHAFQEASDLREELERTEAAVVGGKKKRDIDVAEREAQLKIYEEEIRRLEAE 123
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FS02_ECTSI2.410e-9547.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FS03_ECTSI1.330e-3166.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 278..298
NoneNo IPR availableCOILSCoilCoilcoord: 209..236
NoneNo IPR availableCOILSCoilCoilcoord: 157..184
NoneNo IPR availableCOILSCoilCoilcoord: 334..361
NoneNo IPR availableCOILSCoilCoilcoord: 118..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:346815..353136 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15871.1mRNA_C-linearis_contig80.15871.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 346815..353136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15871.1 ID=prot_C-linearis_contig80.15871.1|Name=mRNA_C-linearis_contig80.15871.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=883bp
NQSNNSTVTPRRPLQLEQKLTKPARSGGRDGSGRRRSSKQVVDADNDAGG
RSILVVGEKATKLPRAEAGAGRDPARRESADSVVEEESSTEADRDRQLFG
LAELVQAEIERAAEAQVVEHLKQRTARALNEVAVLRHELERTEAAVVGGK
KKRDSDVAERESQLRRCQEEIRRLESEVEYHRVQLGKSVAEEERLGEELK
RTQESLLFLSAWDEEKIELESEVGSLKAQLSAVSKEGNKRLEIAQQEFNY
LSATAGQKAGLRLERQGGDTEKIRLDLEKGLSEEFKSLRRENEVLRRETA
HKDSEINRIMKNAALIESDKRAARAELDDERRVHHTTIRKKKRAEATIAE
LQAQLSMALSSASGRPFSPSNINLSQRRPKKHWGTPRPPAPGRGKLLVRE
SDDRGGGYREVLPGGGKKGVSKVSTFLVPARKSEAEEKGGDQEKADVVVA
PPTERSAATTTAARIRDPEKPLGRGREKERPANKGLGPASVGEEEQGGGD
IPELLPCGSGSEVTTGDVWGMLGSYVHRRSEVARANRHLGAIEAMRRHLE
KNNKRACNPTASNYCSATTATVQYDYRGRRRVRMGGENHKRNSDEAVWRV
SRRKRARQEDRLSEAFAVETRRPHSKKAVGAKQTKPRVRLQPHPPPRCKR
DGSVSSISQATSVRFWEECEQDSTPRKTRSPRGALPPKAASSLSRDGAAA
GRGGGAEKENAAGRGGTMAMISYGRPDRPRDTGNTSGNTSGNHRARRGRG
GSLTCPSKGDGDSDPVSCISGDTASAHRQQNEEEASAVTSVDTRSPSAAS
SGLASGVGAKVKAAAGWLWGGNAAEEMLPSEPQGGGGKGLHVGLKARATG
RKTKAGQREARRDMELAEWLETNTNLVKVSPW*
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