prot_C-linearis_contig80.15864.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15864.1
Unique Nameprot_C-linearis_contig80.15864.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length119
Homology
BLAST of mRNA_C-linearis_contig80.15864.1 vs. uniprot
Match: D8LQI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI3_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 8.220e-31
Identity = 62/128 (48.44%), Postives = 72/128 (56.25%), Query Frame = 0
Query:    1 MTTMAQMRRFDYSDGDFMPLKIDNDRDRRCFQCNRAFWSGEVIDIIPPGTV------GNYAWIGRRCRYSCEAGKRN-----DPRSNEKPTXXXXXXXXXXXXXXXXXXXXRKGFFARLFESITSCVS 117
            MTTMA MR F ++D DF+PLKIDND D+ C++C RAFW GE I+IIPP TV       NYAWIGRRCRYSC+ G R       PR +E                       R  F AR+  SI SCVS
Sbjct:    1 MTTMAHMRYFYHTDDDFIPLKIDNDGDKSCYKCRRAFWKGETIEIIPPNTVKNKSGGDNYAWIGRRCRYSCDGGARGARDRATPRGSET-----------HDDVSRHSSTTRPWFLARVIASIRSCVS 117          
BLAST of mRNA_C-linearis_contig80.15864.1 vs. uniprot
Match: A0A6H5KSK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK6_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 3.820e-30
Identity = 53/76 (69.74%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    1 MTTMAQMRRFDYSDGDFMPLKIDNDRDRRCFQCNRAFWSGEVIDIIPPGTVGN------YAWIGRRCRYSCEAGKR 70
            MTTMA MR F Y+D DF+PLKIDND DR CF+C RAFW GE I+IIPP TVGN      YAWIGR+CRYSCE G R
Sbjct:    1 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPHTVGNKSGGDNYAWIGRKCRYSCEEGAR 76          
BLAST of mRNA_C-linearis_contig80.15864.1 vs. uniprot
Match: D8LQI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI4_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 2.980e-27
Identity = 52/76 (68.42%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    1 MTTMAQMRRFDYSDGDFMPLKIDNDRDRRCFQCNRAFWSGEVIDIIPPGTVGN------YAWIGRRCRYSCEAGKR 70
            MTTMA MR F Y+D DF+PLKIDND DR CF+C RAFW GE I+IIPP TVGN      YAWIGR+CRYSC+ G R
Sbjct:    1 MTTMAIMRYFYYTDDDFIPLKIDNDGDRFCFKCRRAFWKGETIEIIPPNTVGNRSGGDNYAWIGRKCRYSCDEGAR 76          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQI3_ECTSI8.220e-3148.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSK6_9PHAE3.820e-3069.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQI4_ECTSI2.980e-2768.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:312381..314316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15864.1mRNA_C-linearis_contig80.15864.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 312302..314807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15864.1 ID=prot_C-linearis_contig80.15864.1|Name=mRNA_C-linearis_contig80.15864.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=119bp
MTTMAQMRRFDYSDGDFMPLKIDNDRDRRCFQCNRAFWSGEVIDIIPPGT
VGNYAWIGRRCRYSCEAGKRNDPRSNEKPTPPPPPGPDSPVATPTPTPTP
RKGFFARLFESITSCVSK*
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