prot_C-linearis_contig80.15855.1 (polypeptide) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig80.15855.1 vs. uniprot
Match: A0A6H5L4X5_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X5_9PHAE) HSP 1 Score: 859 bits (2220), Expect = 8.030e-284 Identity = 787/1592 (49.43%), Postives = 893/1592 (56.09%), Query Frame = 0
Query: 1 MANRGKQFKALSPKKVSRRKRAPRCETCGKRDGEDLGGEGQGKVRLKLCARCRGVAYCGMECQKMGWKVHREVCVQYANAAELPPPSPLVN-QKMSGAGPRGRRKVII-GGAVGNVGATPRQRENAPTRHPFFGRQESSSERDPRGAKALPVRKQKEQDVQQRTPRRLQHPQQQQRQQPRHA----------------------QPSNANDEDVCPSPPVMQRLSFPGGISRTRQGSRPGSAGG-DSKRSTSTSKSPQLTQQQHRPTSRGSVAAAVKAAASRVRRSSHAADNGTRWRGSLSPXXXXXXXXXXXX------PVRRESAPLYPVALEKSXXXXXXXXXXXXXXXXXXXXXXXXXASVAHRAETIKQASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---QPAVAGENGPAAAKGEDADAPEKSPPSEKEA----FAGQTRAWIDGAQLFKREEDEEDEKELEGLGEEEDTD----------EPTPERRE-EGARSEGVFGVPQGVDTPSLAKESTEYSGSGPATAAVEAADTAAVPERPYLSKDSSRDLSQDSTAGSTTGQGGSTVRARLXXXXXXXXXXXXXXXXXXXXXXXXXTAGPVLPSLAKKDSADGFXXXXXXXXXXXXXXXXAQVRPSLARDLXXXXXXXXXXXXXXXXAGPVQPSLSKDSTDSCXXXXXXXXXXXXXXSSVPVRASLARDLXXXXXXXXXXXXXXXXXXXXXXXXXDSTDSCSXXXXXXXXXXXXXXXXXXXPPPPILPSSAISNASGLARASNDGVFDSCPPSAGAG-SKPGSHRSLSVGTSPQFHSMPLVLAAKGIAAAAAAAWNGDHRRSSPRPRPPVSPGPAALSDS------FRFRKQSAADPDDFFMPKKSLSAXXXXXIASFGREKKSASAPP-SRALSARSLSAGSHRASPRSGMTSPRSPPFVPAIKLSPQGKLQVSPRVPGPRPTDTAAFYQERLGAPPAGAAG---LPPPSRTYLGRPDGFSVHVLVASAPTRADLAATRGDLPAAVGGKDNSPRLFYSFEDRDRVAAALQPGDVVLVTPGRYEARAWGLQRLIASVEIVGAGAAGDCVIYNNTPXXXXXXXXXXXXXXSHSGLPEREHYLVGVMGGALCSVGGEGGASGVPEVKGKDVV--DDDSDSGFEDGALGGAAAASSISSFGGRAVRVRLANLTLEHGSGYRGAVYQLGRESHLEMEGCTVVCSQGGVNIDQGTCAISDSTISGSEAFGVHIGGEGAVEHCLIRGCGRGGGRGSRSRGGEQGAAETFPSSADDGAAAGEGEVEVEDDGTDVNRVKGMPAISFLQRSRVRVRFNVIRDNAGHSLQCRDAPLPGGDGKYAMLARRAEAEAEEKLRSWLGSAAMLLREHLQEQHREGSIVSEGNQSKLNRGCDRAGCGGXXXXXXXXXXXGAAAEGVTTTACPAAGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKGAGMGQTCAPTAEEEGLPLPAAMTLRFLAAMDEGYVGSRREENARLRRRR 1530
M+NRGKQFKALSPKKVSRRKR PRC++CGKRDGED GGEGQ K+RLKLCARCR VAYCGMECQK GWKVHREVC+ YA+A+ELPP SP VN QK+SG G RG R+++ GGAVG+VGATPRQRE+APTRHPFFGRQ +S E D R ++Q + + L+ ++QQ Q QP A++E+ CPSPP MQRLS+PG R+ QGS+ GS+GG D+KR + KSP + ASR RR +H G R GSLSP P+RRESAPLYP ALEK+ A V+ R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QPA GE+ A KG AP +S ++ F G ID ++ K + E ++ GEE EPTPE R + AR+ G P+ V P +AK+ ++ S +G A + D VP +P L+ + ++SQD AGS G+ G A KDSA G XXXXXXXX RP+ XXXXXXXXXXXX +S D+ XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX ASG+A + GVFDSCPPS GA S+PGS RSLSVGT PQF SMPL+LAA+ A+AA AAW D RR+SPRPRPPVSPGPAALS + FRFRK SAA D P+++L + + G +K SAP SR LSA S SA SH + + + PPFVP I+LSP+ L SP PGPR TDTA FY ER GA PA A LPP S+ Y GRP GFSVHVLVASA + ADL GG +SPRL YSFEDR RVA AL+PGDVVL+TPGRYEARAWGLQRL++SVEI+GAG A DCV+YN+ SG P EHYLVGVMGGAL S G GGAS VPEVKGKDVV +DDSDSGFEDGALG A S + SF RAVRVRLANLTLE GSGYRGAVYQLGRESHLEM+GCTVV S+GGVN+DQGTC I DS ISGSE FGVHIGGEGAVEHC IRGCGRGG TDVNRV MPAIS LQ SRVRVRFNVIRDNAGH+LQ RDAPLPGGDGKYA+LARRAEAEAEEKLRSWLGSAA+LLR+HLQ QHREGS+VSEGNQ LNRGCD A C G G AAE + XXXXXXXXXXX + QTC PTAEEEGLPLP+AMTLRFLAAMDEGYVGSRREENARL++RR
Sbjct: 1 MSNRGKQFKALSPKKVSRRKRTPRCDSCGKRDGEDAGGEGQPKIRLKLCARCRAVAYCGMECQKAGWKVHREVCMHYASASELPPQSPSVNHQKVSGTGQRGSRRIVTYGGAVGSVGATPRQREHAPTRHPFFGRQ-NSIESDRRATVG---------NLQ--SSKALREGERQQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXQP--ASEEEPCPSPPTMQRLSYPG-RGRSWQGSKSGSSGGNDAKRPSPVGKSPSE-KXXXXXXXXXXXXXXXXXXASRARRRTHNLTKGGRAYGSLSPTPAPPAAEEVKRRRAGSGPIRRESAPLYPAALEKTKRLAARKDASLA-------------ADVSRRGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTANVRQTTRIPPPLPPRPSVSLDANTAFPRGSSLSPGLAGGTSTGSPQQLAPENKAGGDQPA--GEHESTAGKG--VKAPRESQLENEKPQVSRFGGGGEGEIDALEVAK--DGEGGGVQVAREGEEXXXXXXXXXXXXXXEPTPESRAGDDARARDTHGAPEWVVPPPVAKDRSQDSAAGSPRARED--DNEVVPVQPVLTTGPAHEVSQDLAAGSVLGREGDAALA--------------------------------------KDSAAGSXXXXXXXXPRPREDNLVPSRPAXXXXXXXXXXXXXXXXX-----------MSGQEGDAAVVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------ASGVA---DTGVFDSCPPSTGASPSEPGSQRSLSVGTVPQFLSMPLMLAAREKASAAVAAWQKD-RRNSPRPRPPVSPGPAALSQASPLKSAFRFRKPSAASEHDDEGPERTLPSSASATLG--GGARKILSAPLLSRTLSALS-SAASHASHGLAKASPTTRPPFVPTIELSPRASLPASPHAPGPRITDTAKFYLERAGAAPAPAGDVGLLPPASKAYFGRPSGFSVHVLVASALSAADLGDRHQQ--HLEGGGSHSPRLCYSFEDRGRVAEALRPGDVVLLTPGRYEARAWGLQRLVSSVEIIGAGDAADCVLYNDPAC---------------SG-PAGEHYLVGVMGGALGSAAG-GGAS-VPEVKGKDVVADEDDSDSGFEDGALG--PANSLVHSFSSRAVRVRLANLTLEQGSGYRGAVYQLGRESHLEMDGCTVVGSKGGVNVDQGTCIIRDSWISGSEVFGVHIGGEGAVEHCSIRGCGRGG---------------XXXXXXXXXXXXXXXXXXXXXXXTDVNRVGSMPAISILQSSRVRVRFNVIRDNAGHTLQYRDAPLPGGDGKYALLARRAEAEAEEKLRSWLGSAAVLLRDHLQGQHREGSVVSEGNQCHLNRGCDLARCSG-----------GGAAEEIGVXXXXXXXXXXXXXXXXXXXXAGEGEGLEPEVGGQEICEEVSRDGPGEGETRTRTLRGQQTCVPTAEEEGLPLPSAMTLRFLAAMDEGYVGSRREENARLKKRR 1413
BLAST of mRNA_C-linearis_contig80.15855.1 vs. uniprot
Match: D7FI04_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI04_ECTSI) HSP 1 Score: 782 bits (2019), Expect = 5.310e-254 Identity = 740/1626 (45.51%), Postives = 837/1626 (51.48%), Query Frame = 0
Query: 1 MANRGKQFKALSPKKVSRRKRAPRCETCGKRDGEDLGGEGQGKVRLKLCARCRGVAYCGMECQKMGWKVHREVCVQYANAAELPPPSPLVN-QKMSGAGPRGRRKVIIGGAVGNVGATPRQRENAPTRHPFFGRQESSSERDPRGAKALPVRKQKEQDVQQRTPRRLQHPQQQQRQQPRHAQPSNANDEDVCPSPPVMQRLSFPGGISRTRQGSRPGSAGG-DSKRSTSTSKSPQLTQQQHRPTSRGSVAAAVKAAASRVRRSSHAADNGTRWRGSLSPXXXXXXXXXXXX------PVRRESAPLYPVALEKSXXXXXXXXXXXXXXXXXXXXXXXXXASVAHRAETIKQASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAVAGENGPAAAKGEDADAPEKSPPSEKEAFAGQTRAWIDGAQLFKREEDEEDEKELEGLGEEEDTDE-PTPE--------------------------------RREEGARSEGVFGVPQGVDTPSLAKESTEYSGSGPATAAVEAADTAAVPERPYLSKDSSRDLSQDSTAGSTTGQGGSTVRARLXXXXXXXXXXXXXXXXXXXXXXXXXTAGPVLPSLAK-------KDSADGFXXXXXXXXXXXXXXXXAQVRPSLARDLXXXXXXXXXXXXXXXXAGPVQPSLSKDST-----DSCXXXXXXXXXXXXXXSS----------------VPVRASLAR--------DLXXXXXXXXXXXXXXXXXXXXXXXXXDSTDSCSXXXXXXXXXXXXXXXXXXXP--PPPILPSSAISNASGLARASNDGVFDSCPPSAGAG-SKPGSHRSLSVGTSPQFHSMPLVLAAKGIAAAAAAAWNGDHRRSSPRPRPPVSPGPAALSDS------FRFRKQSAADPDDFFMPKKSLSAXXXXXIASFGREKKSASAPP-SRALSARSLSAGSHRASPRSGMTSPRS---PPFVPAIKLSPQGKLQVSPRVPGPRPTDTAAFYQERLGAPPAGAAG---LPPPSRTYLGRPDGFSVHVLVASAPTRADLAATRGDLPAAVGGKDNSPRLFYSFEDRDRVAAALQPGDVVLVTPGRYEARAWGLQRLIASVEIVGAGAAGDCVIYNNTPXXXXXXXXXXXXXXSHSGLPEREHYLVGVMGGALCSVGGEGGASGVPEVKGKDVV--DDDSDSGFEDGALGGAAAASSISSFGGRAVRVRLANLTLEHGSGYRGAVYQLGRESHLEMEGCTVVCSQGGVNIDQGTCAISDSTISGSEAFGVHIGGEGAVEHCLIRGCGRGG-GRGSRSRGGEQGAAETFPSSADDGAAAGEGEVEVEDDGTDVNRVKGMPAISFLQRSRVRVRFNVIRDNAGHSLQCRDAPLPGGDGKYAMLARRAEAEAEEKLRSWLGSAAMLLREHLQEQHREGSIVSEGNQSKLNRGCDRAGCGGXXXXXXXXXXXGAAAEGVTTTACPAAGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKGAGMGQTCAPTAEEEGLPLPAAMTLRFLAAMDEGYVGSRREENARLRRRR 1530
M+NRGKQFKALSPKKVSRRKR PRC++CGKRDGED GGEGQ K+RLKLCARCR VAYCGMECQK GWKVHREVCV YA+AAELP SPLVN QK+SG G RG +RQGS+ G+ GG D+KR + KSP +QQ RR +H G R GSLSP PVRRESAPLYP LEK+ + A AS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +A EN A G+ P E E+ AG+ +QL E+E+ + G G E + D P+ R + A++ G P+ V +AK+ ++ S +G A + D VP +P L+K S+ ++SQD AGS G+ G A+ XXXXXXX + V P+L K KDSA R S A PVQP+L+K S DS S VP R ++A+ D XXXXXXXXXX XXXXXXXXXXXXXX P PPP + +S+ + AS LA + GVFDSCPPS GA S+PGS RSLSVGT PQF SMPLVLAA+ A+AA AAW D RR+SPRPRPPVSPGPAALS S FRFRK SAA D P+ ++ + G + SAPP SR SA LS+ + ASP S S PPFVP I+LSP+ L SP PGPR TDTA FY+ER A PA A LPP S+ Y GRP GFSVHVLVASA + ADL + GG +NSPRL+YSFEDR RVA AL+PGDVVLVTPGRYEARAWGLQRL++SVEI+GAG AGDCV+YN+ S P+ EHYLVGVMGGAL S G GGAS VPEVKGKDVV DDDSDSGFEDGALG A S + SF RAVRVRLANLTLE GSGYRG VYQLGRESHLEM+GCTV S+GGVNIDQGTC I DS ISGSE FGVHIGGEGAVEHC IRGCGRGG G G+ ++ T ++ D E GTDVNRV MPAIS LQ SRVRVRFNVIRDNAGH+LQ RDAPLPGGDGKYA+LARRAEAEAEEKLRSWLGSA++LLREHLQ QHREGS+VSEGNQ LNRGCD A C G G AAE + A XXXXXXX QTC PTAEEEGLPLPAAMTLRFLAAMDEGYVGSRREENARL++R+
Sbjct: 1 MSNRGKQFKALSPKKVSRRKRTPRCDSCGKRDGEDAGGEGQPKIRLKLCARCRAVAYCGMECQKAGWKVHREVCVHYASAAELPSQSPLVNHQKVSGTGQRGS----------------------------------------------------------------------------------------------------------SRQGSKSGNIGGNDAKRPSPVGKSPSE-KQQPXXXXXXXXXXXXXXXXXXARRRTHNLTKGGRAYGSLSPTPPPPDAEEVKRRRSGSGPVRRESAPLYPAVLEKTKRL-----------------------AARKDASLTADASRRGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTADVRQTTRIPPPLPPRPSVSLDANTAFPRGSSLSPGLAGGTSTGSPQQLAPEN---KAGGD-------QPAGEHESTAGKGVEAPRESQL----ENEKPQVSRSGGGGEAEIDALEVPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAGDDAQARDARGAPEWVVPSPVAKDRSQDSAAGSPRARED--DNGVVPVQPALTKGSAHEVSQDLAAGSVLGREGDPALAK-----DSAAGSSXXXXXXXPRAGEDSSVVTVQPALTKGSEHDLSKDSASVSVSDRDGDADLANDSAAGWSRDSAAGS--------PRPREEDSSVVPVQPALTKGSEHETSQDSAAGSVLSREGGTAAAGSSXXXXXXXXXXXXDNVVPARPAMAKGSAGTVSQDSAAGSMSGQEGDAAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVPLPMEPPPPIQTSSKTGASSLA---DTGVFDSCPPSTGASPSEPGSQRSLSVGTVPQFLSMPLVLAAREKASAAVAAWQKD-RRNSPRPRPPVSPGPAALSQSSPLKSAFRFRKPSAAVEHDDEGPE--ITPPSAATLG--GGSGRKLSAPPLSRTFSA--LSSAASHASPGSASRSASRTTRPPFVPTIELSPRASLPASPHAPGPRITDTAKFYRERANAAPAPAGDIGLLPPASKAYFGRPSGFSVHVLVASALSAADLGDRQQQ--HLEGGGNNSPRLYYSFEDRGRVAEALRPGDVVLVTPGRYEARAWGLQRLVSSVEIIGAGDAGDCVLYNDRV----------------SSGPDGEHYLVGVMGGALGSAGA-GGAS-VPEVKGKDVVADDDDSDSGFEDGALG--PANSLVHSFSSRAVRVRLANLTLEQGSGYRGTVYQLGRESHLEMDGCTVAGSKGGVNIDQGTCIICDSWISGSEVFGVHIGGEGAVEHCSIRGCGRGGRGXXXXXXXGKYLSSSTVCNAGD------EXXXXXXXXGTDVNRVGSMPAISILQSSRVRVRFNVIRDNAGHTLQYRDAPLPGGDGKYALLARRAEAEAEEKLRSWLGSASVLLREHLQGQHREGSVVSEGNQCHLNRGCDLARCSG-----------GGAAEEIGAAARXXXXXXXXXXXXXAESTAGEGEGLEPEVGGQEIGEEVSRDGPGGGETRTGTLRGQQTCVPTAEEEGLPLPAAMTLRFLAAMDEGYVGSRREENARLKKRK 1418 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig80.15855.1 ID=prot_C-linearis_contig80.15855.1|Name=mRNA_C-linearis_contig80.15855.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1540bpback to top |