prot_C-linearis_contig80.15854.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15854.1
Unique Nameprot_C-linearis_contig80.15854.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length222
Homology
BLAST of mRNA_C-linearis_contig80.15854.1 vs. uniprot
Match: D7FI03_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI03_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 6.360e-94
Identity = 182/220 (82.73%), Postives = 193/220 (87.73%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTQDIGTNISHLSTYETDAVKKRTQLTHVDALVGQAGDLLKQMEIEVRSTPNAATKKELQGKMSSYKKTLQALRGDYQRAVEKQEREGLLGGRETAFAQGGASQEQRDRLLQTTDRLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDVSGMTASARRLVQNMNRREVQQRCMMYGIGLMLVVGVIVAVYYSM 220
            MSSIFEAYDEEFLALTQDIG NISHL+TYETDA KKRTQLTH+DALVGQAGDLLKQMEIEVRST +AA+KKELQGK++SYKKTLQ+LRGDYQRAVEKQEREGLLGGRE AFAQGGASQEQRDRLLQTTD    XXXXXXXXXXXXXXXXXXXXXXXX               VRDVSGMT SARRLV NMNRREVQQRC+MYGIGL+LV+G I AVYY+M
Sbjct:    1 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHIDALVGQAGDLLKQMEIEVRSTQDAASKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGRNREKIGEVHDKVRDVSGMTTSARRLVHNMNRREVQQRCIMYGIGLVLVIGAIAAVYYTM 220          
BLAST of mRNA_C-linearis_contig80.15854.1 vs. uniprot
Match: A0A6H5L3U6_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3U6_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 1.970e-70
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTQDIGTNISHLSTYETDAVKKRTQLTHVDALVGQAGDLLKQMEIEVRSTPNAATKKELQGKMSSYKKTLQALRGDYQRAVEKQEREGLLGGRETAFAQGGASQEQRDRLLQTTD 129
            MSSIFEAYDEEFLALT DIG NISHL+TYETDA KKRTQLTHVDALVGQAGDLLKQMEIEVRST +AATKKELQGK++SYKKTLQ+LRGDYQRAV+KQEREGLLGGRE AFAQGGASQEQRDRLLQTTD
Sbjct:    1 MSSIFEAYDEEFLALTHDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVDKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129          
BLAST of mRNA_C-linearis_contig80.15854.1 vs. uniprot
Match: A0A836CJ32_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ32_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.470e-52
Identity = 102/222 (45.95%), Postives = 143/222 (64.41%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTQDIGTNISHLSTYETDAVKKRTQLTHVDALVGQAGDLLKQMEIEVRSTPNAATKKELQGKMSSYKKTLQALRGDYQRAVEKQEREGLLG---GRETAFAQGGASQEQRDRLLQTTDRLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDVSGMTASARRLVQNMNRREVQQRCMMYGIGLMLVVGVIVAVYYS 219
            M+SIFE+Y EEF+ LT D+  NISH STYET+   +  QL   + L+GQA DLLKQME+E RSTP+A T+++LQ K++SYKK+L ++R DYQ AVEK ER+GL+    G E  ++Q GAS+E R+RLL+T D+L+                                        VR+VS MTA+ARRLV NM++REVQQR +++GI L+L++ VI+ +Y++
Sbjct:    1 MTSIFESYHEEFVTLTTDLSRNISHASTYETNPAARSGQLRQANVLLGQADDLLKQMEVEARSTPDAPTRRDLQAKVASYKKSLASVRRDYQTAVEKTERQGLMSTADGLEHLYSQAGASKEHRERLLKTGDKLNEQSEMLANSKRTILEIEGVAGEITTELGRNRETIQSAHGKVREVSAMTANARRLVHNMSKREVQQRFILWGIALLLLLAVILVIYFA 222          
BLAST of mRNA_C-linearis_contig80.15854.1 vs. uniprot
Match: A0A7S2V424_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V424_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.640e-34
Identity = 82/218 (37.61%), Postives = 121/218 (55.50%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTQDIGTNISHLSTYETDAVKKRTQLTHVDALVGQAGDLLKQMEIEVRSTPNAATKKELQGKMSSYKKTLQALRGDYQRAVEKQEREGLLGGRETAFAQGGASQEQRDRLLQTTDRLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDVSGMTASARRLVQNMNRREVQQRCMMYGIGLMLVVGVIVAVYY 218
            M+S+FE Y EEF +L+  I  NIS ++TYE DA KK+  L  VD ++ QA +LL+QME+E RS  ++  ++ELQG+   Y  TL  LR D+ RA + +ER  L+GG   A +  G S +QR RLL++   LD                                        VR+V  MT +ARR++ +MN+REVQQ+ ++YG+ L+L+  + V +YY
Sbjct:   21 MASMFEDYCEEFSSLSTQISKNISDITTYEDDAEKKKKLLRTVDTMLVQASELLQQMELEARSESDSGARQELQGRAQQYGTTLDRLRADHARARQDEERRDLMGG---AGSGKGISADQRQRLLKSGQLLDDQTSKLSNARAVIQETEEVALEITQELGRNREKIESVHSKVREVGSMTHTARRIIHSMNKREVQQKFIIYGVALVLLAAICVVIYY 235          
BLAST of mRNA_C-linearis_contig80.15854.1 vs. uniprot
Match: W7U7B0_9STRA (Vesicle transport through interaction with t-snares 1a n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7B0_9STRA)

HSP 1 Score: 112 bits (281), Expect = 7.060e-27
Identity = 75/219 (34.25%), Postives = 116/219 (52.97%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTQDIGTNISHLSTYETDAVKKRTQLTHVDALVGQAGDLLKQMEIEVRSTPNAATKKELQGKMSSYKKTLQALRGDYQRAVEKQEREGLLGGRETAFAQGGASQEQRDRLLQTTDRLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDVSGMTASARRLVQNMNRREVQQRCMMYGIGLMLVVGVIVAVYYS 219
            M+ IFE+Y++EF AL  D    +S+L TYET   K ++ L      V Q   L+KQM++EVRS  +A TK  L  K+ +Y++ L  ++ D  RA E++E++ LLG      A GG S  QR RLL+T++RL                                         V +V G+T +ARRL+ +++RRE QQ+ M++G+   L++ +I+ +YYS
Sbjct:   40 MTDIFESYEDEFRALAGDCQKKLSNLLTYETHGDKIQSLLRQASPQVTQLEGLIKQMKLEVRSL-DAGTKAALSAKVQTYERVLTGVKADLGRAREREEKDALLG------AGGGVSMVQRQRLLETSERLAHQNRTIDNARKVMAETEQVGIHIGEELESNREKIQSIRGKVSEVGGLTNTARRLISSISRRETQQKLMLWGVAASLLIAIILIIYYS 251          
BLAST of mRNA_C-linearis_contig80.15854.1 vs. uniprot
Match: A0A7S4MGJ4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MGJ4_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.820e-25
Identity = 82/217 (37.79%), Postives = 114/217 (52.53%), Query Frame = 0
Query:    1 MSSI-FEAYDEEFLALTQDIGTNISHLS-TYETDAVKKRTQLTHVDALVGQAGDLLKQMEIEVRSTPNAATKKELQGKMSSYKKTLQALRGDYQRAVEKQEREGL-LGGRETAFAQGGASQEQRDRLLQTTDRLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDVSGMTASARRLVQNMNRREVQQRCMMYGIGLMLVVGVIV 214
            MSSI F+ YDEEFL+LT+ +  +++ L    E+      + L     L+ Q  DLLKQM +E RS  +A+ K+EL  K+   K  LQ LR +Y  A  K +R  L LGG  +A   GGAS + R+RLL+T+ +L+                                        V+DVSG+T  ARR+VQ+MNRREVQQ+  MY +  ML+V +IV
Sbjct:   16 MSSIPFDRYDEEFLSLTEQVRRSLASLEGDIESGGSSVESDLKMTANLLSQCDDLLKQMGLEARSVGDASAKRELLDKVKKCKSKLQGLRSEYNAARNKMDRANLGLGG--SAPHSGGASNDHRERLLKTSGQLEEQNRTLDRARRVMAETEETALEITEELGRNREKIESAHGRVKDVSGLTNRARRIVQSMNRREVQQKLAMYVVSAMLIVVLIV 230          
BLAST of mRNA_C-linearis_contig80.15854.1 vs. uniprot
Match: A0A7R9ZE01_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZE01_9STRA)

HSP 1 Score: 104 bits (259), Expect = 9.140e-24
Identity = 80/220 (36.36%), Postives = 112/220 (50.91%), Query Frame = 0
Query:    1 MSSI-FEAYDEEFLALTQDIGTNISHL-----STYETDAVKKRTQLTHVDALVGQAGDLLKQMEIEVRSTPNAATKKELQGKMSSYKKTLQALRGDYQRAVEKQEREGLLGGRETAFAQGGASQEQRDRLLQTTDRLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDVSGMTASARRLVQNMNRREVQQRCMMYGIGLMLVVGVIV 214
            MSSI F+ YDEEFL+LT+ +  ++S L     S   + +V+   ++T    L+ Q  DLLKQM +E RS  +A +K EL GK+   K  L  LR +Y+ A  K ER  L      A   GG S + R+RLL+T D+L+                                        VRDV+G+T  ARR+VQ+MNRREVQQ+  MY +   L++ +IV
Sbjct:   17 MSSIPFDRYDEEFLSLTEQVRRSLSSLEGDLESNGGSSSVESDLKMTA--NLLSQCDDLLKQMGLEARSAGDAQSKSELLGKVKKCKSKLSGLRSEYEAARTKMERSHLGLDNGNAPRSGGLSNDHRERLLKTNDQLENQNRTLDRARRVMAETEDTALEITEELGRNREKIESAHGRVRDVAGLTNRARRIVQSMNRREVQQKLAMYVVSAALIIVLIV 234          
BLAST of mRNA_C-linearis_contig80.15854.1 vs. uniprot
Match: A0A6U3TH34_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3TH34_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 7.310e-22
Identity = 72/198 (36.36%), Postives = 95/198 (47.98%), Query Frame = 0
Query:   20 GTNISHLSTYETDAVKKRTQLTHVDALVGQAGDLLKQMEIEVRSTPNAATKKELQGKMSSYKKTLQALRGDYQRAVEKQEREGLLGGRETAFAQGGASQEQRDRLLQTTDRLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDVSGMTASARRLVQNMNRREVQQRCMMYGIGLMLVVGVIVAVY 217
            G NISH+STYETD  KK T L  +D  + Q  DLLK MEIEVR   +  TKK +  K   +KKTL AL  DY  A    ERE L G          A+ EQRDRL+ +TDRL                                         +  V  +T SARRL++NM++REVQQ+ ++     +++  + V +Y
Sbjct:    1 GKNISHVSTYETDIEKKMTLLRGIDNTMQQTRDLLKSMEIEVRGQEHPPTKKSMAEKTQQFKKTLAALTADYAAAKLSTEREALHGDNCDE-----ATVEQRDRLMASTDRLGKGTDRIRRAQEVLADTESTAMEICHELDRSREKIDSAHLRIHQVRDLTDSARRLIRNMSKREVQQKLVLAFTATLILAAIGVTIY 193          
BLAST of mRNA_C-linearis_contig80.15854.1 vs. uniprot
Match: A0A6U0HSB3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0HSB3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 6.250e-21
Identity = 74/219 (33.79%), Postives = 105/219 (47.95%), Query Frame = 0
Query:    1 MSSI-FEAYDEEFLALTQDIGTNISHLSTYETDAVKK-RTQLTHVDALVGQAGDLLKQMEIEVRSTPNAATKKELQGKMSSYKKTLQALRGDYQRAVEKQEREGLLGGRETAFAQGGASQEQRDRLLQTTDRLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDVSGMTASARRLVQNMNRREVQQRCMMYGIGLMLVVGVIVAVY 217
            MS++ FE YDEEFL LT+ I  ++S L      A     + L     ++ Q  DLLKQM +E R   N  TK++L  K+   K  L  LR DY +A  K ER  L+G    +   G AS   ++RLL  +DR+                                         VR+VSG+T  ARR+VQNM+RREVQQ+ +MY +  +LV+   + ++
Sbjct:   27 MSTVSFERYDEEFLLLTEQIEKSLSSLDIESNQASSSAESDLKLASNILSQCDDLLKQMSVEARGADNPDTKRDLLHKVRICKAKLANLREDYDKAKSKAERMSLIGSSSGSRVDG-ASGSHKERLLANSDRIKSQNETLDRARRVMADTEETAMEITTELGRNRETIQSAHGRVREVSGLTNRARRIVQNMSRREVQQKLVMYMVLAVLVIVFFIIIF 244          
BLAST of mRNA_C-linearis_contig80.15854.1 vs. uniprot
Match: A0A7S1ZUM9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZUM9_TRICV)

HSP 1 Score: 95.5 bits (236), Expect = 2.440e-20
Identity = 91/221 (41.18%), Postives = 125/221 (56.56%), Query Frame = 0
Query:    1 MSSI-FEAYDEEFLALTQDIGTNISHLST-YETDAVKK-RTQLTHVDALVGQAGDLLKQMEIEVRSTPNAATKKELQGKMSSYKKTLQALRGDYQRAVEKQEREGLLGGRETAFAQGGA-SQEQRDRLLQTTDRLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDVSGMTASARRLVQNMNRREVQQRCMMYGIGLMLVVGVIVAVY 217
            MS++ FE YDEEFL+L++ +  ++  L+   E   V    + L     L+ Q  DLLKQM +E R   NA +KKEL GK+   K  L +L+ DY+ A  + +R GL     T+ A GG    + R+RLL+T D+L                         XXXXXXXXXXXXXXXX   VSG+T  ARR+VQ+MNRREVQQ+  MY +   L++ +IV ++
Sbjct:   24 MSTVPFERYDEEFLSLSEQVRRSLDSLNDDLEKGGVTSVESDLKMSSNLLSQCDDLLKQMGLEARGADNAESKKELLGKVKVCKSKLSSLKSDYEAARNRADRAGLGLDPSTSGASGGGLKNDHRERLLRTNDQLSRQNETLENARRIMADTEGVALEITXXXXXXXXXXXXXXXXXXXVSGLTNRARRIVQSMNRREVQQKLAMYVVSFALILVIIVIMF 244          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI03_ECTSI6.360e-9482.73Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A6H5L3U6_9PHAE1.970e-7091.47t-SNARE coiled-coil homology domain-containing pro... [more]
A0A836CJ32_9STRA2.470e-5245.95Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2V424_9STRA3.640e-3437.61Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7U7B0_9STRA7.060e-2734.25Vesicle transport through interaction with t-snare... [more]
A0A7S4MGJ4_9STRA2.820e-2537.79Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9ZE01_9STRA9.140e-2436.36Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6U3TH34_9STRA7.310e-2236.36Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6U0HSB3_9STRA6.250e-2133.79Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1ZUM9_TRICV2.440e-2041.18Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..158
NoneNo IPR availableCOILSCoilCoilcoord: 70..101
NoneNo IPR availableGENE3D1.20.5.110coord: 118..198
e-value: 7.7E-16
score: 60.1
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 130..193
e-value: 1.0E-8
score: 35.3
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 1..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 221..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 199..220
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 131..190
NoneNo IPR availableTMHMMTMhelixcoord: 199..218
IPR007705Vesicle transport v-SNARE, N-terminalPFAMPF05008V-SNAREcoord: 12..93
e-value: 3.2E-14
score: 53.0
IPR038407Vesicle transport v-SNARE, N-terminal domain superfamilyGENE3D1.20.58.400coord: 3..99
e-value: 5.7E-18
score: 67.1
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 6..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:249272..255091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15854.1mRNA_C-linearis_contig80.15854.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 248744..255246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15854.1 ID=prot_C-linearis_contig80.15854.1|Name=mRNA_C-linearis_contig80.15854.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=222bp
MSSIFEAYDEEFLALTQDIGTNISHLSTYETDAVKKRTQLTHVDALVGQA
GDLLKQMEIEVRSTPNAATKKELQGKMSSYKKTLQALRGDYQRAVEKQER
EGLLGGRETAFAQGGASQEQRDRLLQTTDRLDGQSRRLEDSKRSMMEIED
TAMEITNELGRNREKIGEVHDKVRDVSGMTASARRLVQNMNRREVQQRCM
MYGIGLMLVVGVIVAVYYSMT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007705Vesicle_trsprt_v-SNARE_N
IPR038407v-SNARE_N_sf
IPR010989SNARE