prot_C-linearis_contig8.15816.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15816.1
Unique Nameprot_C-linearis_contig8.15816.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length226
Homology
BLAST of mRNA_C-linearis_contig8.15816.1 vs. uniprot
Match: D8LLZ5_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ5_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 4.010e-91
Identity = 137/156 (87.82%), Postives = 152/156 (97.44%), Query Frame = 0
Query:   37 RPAVAAAAVGSTGPKDLSGAPVEVIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQDANVKFFEMDWMKTRDLCKSLQKQVKKLPHLELYVGQRGRLESFVCGPSKSALLKDKLDKLVADPKDPSLGEAPIPDEDSLA 192
            RPAVAAA VGSTGPKDLSGAPVEVI +AERYF+VL+ENA++D+IVVIKIYAGFCRACKAFDRKFRLLSLDFQEQ ANVKFFEMDWM+TRDLCKSLQK+VKKLPH+ELYVG+RGRLESFVCGPSKS+LLK+KLDKLVADP DPSLGEAPIPDE+++A
Sbjct:  109 RPAVAAATVGSTGPKDLSGAPVEVISTAERYFEVLRENAQKDQIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQGANVKFFEMDWMQTRDLCKSLQKKVKKLPHMELYVGERGRLESFVCGPSKSSLLKEKLDKLVADPADPSLGEAPIPDEEAIA 264          
BLAST of mRNA_C-linearis_contig8.15816.1 vs. uniprot
Match: A0A6H5JEA9_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA9_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 9.180e-88
Identity = 137/155 (88.39%), Postives = 152/155 (98.06%), Query Frame = 0
Query:   38 PAVAAAAVGSTGPKDLSGAPVEVIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQDANVKFFEMDWMKTRDLCKSLQKQVKKLPHLELYVGQRGRLESFVCGPSKSALLKDKLDKLVADPKDPSLGEAPIPDEDSLA 192
            PAVAAA VGSTGPKDLSGAPVEVID+AERYF+VL+ENA++D+IVVIKIYAGFCRACKAFDRKFRLLSLDFQEQ ANVKFFEMDWM+TRDLCKSLQK+VKKLPH+ELYVG+RGRLESFVCGPSKS+LLK+KLDKLVADP DPSLGEAPIPDE+++A
Sbjct:  383 PAVAAATVGSTGPKDLSGAPVEVIDTAERYFEVLRENAQKDQIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQGANVKFFEMDWMQTRDLCKSLQKKVKKLPHMELYVGERGRLESFVCGPSKSSLLKEKLDKLVADPADPSLGEAPIPDEEAIA 537          
BLAST of mRNA_C-linearis_contig8.15816.1 vs. uniprot
Match: A0A2V3IJC0_9FLOR (Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC0_9FLOR)

HSP 1 Score: 86.3 bits (212), Expect = 1.960e-17
Identity = 42/117 (35.90%), Postives = 75/117 (64.10%), Query Frame = 0
Query:   57 PVEVIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQDANVKFFEMDWMKTRDLCKSLQKQVKKLPHLELYVGQRGRLESFVCGPSKSALLKDKLDKLVA 173
            PV++I   E+Y QVL+E++  D +VV+K++A +CR+C+A   K    + +F    +NV+FF+MD+ + ++LC  L   V  +P    Y G  G +E F CGP ++ +L++K+++ +A
Sbjct:   62 PVQLIHGVEQYLQVLRESS--DSLVVLKVFAPWCRSCRALTPKVNRFAREF----SNVRFFKMDYEQNKELCHRLG--VASMPTFVFYWGVAGEIEKFSCGPQRAYILREKIEQCLA 170          
BLAST of mRNA_C-linearis_contig8.15816.1 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA)

HSP 1 Score: 84.7 bits (208), Expect = 9.230e-17
Identity = 43/110 (39.09%), Postives = 71/110 (64.55%), Query Frame = 0
Query:   61 IDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQDANVKFFEMDWMKTRDLCKSLQKQVKKLPHLELYVGQRGRLESFVCGPSKSALLKDKLDK 170
            ID  + Y  +++E   E+++VVIK +A +CRACKA   KF  ++ D+ +    V+F E+ +   + LCKSL   +K LP++E+  G  G++E F CGPSK + L++KL++
Sbjct:   58 IDDTDAYEALIEEATRENRVVVIKFFASWCRACKAMSPKFTRIADDWPD----VEFHEIMFDNNKKLCKSLG--IKILPYIEIIGGSGGKVEGFTCGPSKISRLQEKLEQ 161          
BLAST of mRNA_C-linearis_contig8.15816.1 vs. uniprot
Match: A0A7S2GHN9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GHN9_9EUKA)

HSP 1 Score: 84.3 bits (207), Expect = 2.960e-16
Identity = 52/137 (37.96%), Postives = 81/137 (59.12%), Query Frame = 0
Query:   50 PKDLS-----GAPVEVIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQDANVKFFEMDWMKTRDLCKSLQKQVKKLPHLELYVGQRGRLESFVCGPSKSALLKDKLDKLVADPKDPSLG 181
            PKD S      +PV++I     Y  + K  A E++ V IKIYA +CRACKA   K+  ++ D   + ++V+F+E+ +   + LCKSL   +K LP +E+  G +G++ SF CGPSK + L   L++    PK+P+ G
Sbjct:   52 PKDSSKGRAASSPVQLIPDTPAYKDLYKAAAREERTVCIKIYATWCRACKAMGPKYERIAKD--PEYSHVEFYEIAFDDNKALCKSLG--IKVLPVIEVVAGSKGKVTSFACGPSKMSKLTFALEEHCI-PKNPANG 183          
BLAST of mRNA_C-linearis_contig8.15816.1 vs. uniprot
Match: A0A7S4C0Q1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0Q1_CHRCT)

HSP 1 Score: 82.8 bits (203), Expect = 5.150e-16
Identity = 41/109 (37.61%), Postives = 73/109 (66.97%), Query Frame = 0
Query:   61 IDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQDANVKFFEMDWMKTRDLCKSLQKQVKKLPHLELYVGQRGRLESFVCGPSKSALLKDKLD 169
            +D  + Y   ++E   E+++VVIK+YA +CRACKA   K++ ++ D+ +    V+F ++ +   ++LCKSL   +K LP++E+  G +G++E F CGPSK + L++KL+
Sbjct:   67 LDDEKAYNAKIEEAKRENQVVVIKVYASWCRACKAMAPKYQRIAEDWPD----VEFCDILFDNNKNLCKSLG--IKVLPYVEIIAGGKGKVEGFSCGPSKVSQLQEKLE 169          
BLAST of mRNA_C-linearis_contig8.15816.1 vs. uniprot
Match: A0A7S3TUC7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TUC7_9SPIT)

HSP 1 Score: 77.4 bits (189), Expect = 2.170e-14
Identity = 40/110 (36.36%), Postives = 68/110 (61.82%), Query Frame = 0
Query:   60 VIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQDANVKFFEMDWMKTRDLCKSLQKQVKKLPHLELYVGQRGRLESFVCGPSKSALLKDKLD 169
            ++  AE Y   +++   E+++VVIK YA +CRACKA   K+  ++ D+ E    ++F EM +   + LCK L   +K LP++E+  G  G+++ F CGPSK + L ++L+
Sbjct:   18 LLAGAEEYEAKIEQAKAENRVVVIKFYASWCRACKAMGPKYVKVAQDWPE----LEFCEMLYDNNKKLCKELG--IKVLPYIEIVAGNAGKVDGFSCGPSKISKLIERLE 121          
BLAST of mRNA_C-linearis_contig8.15816.1 vs. uniprot
Match: A0A836C9F2_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F2_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.880e-13
Identity = 37/101 (36.63%), Postives = 62/101 (61.39%), Query Frame = 0
Query:   68 FQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQDANVKFFEMDWMKTRDLCKSLQKQVKKLPHLELYVGQRGRLESFVCGPSKSALLKDKL 168
            F+   E +  D++V+IK Y  +CRACKAFD K+R L L+ ++QDA   F+E+D    +D+ + L   +K  P + +++    ++ESF CGP +  L+  K+
Sbjct:    4 FEAAVEASHGDRLVIIKAYVPWCRACKAFDLKYRRLGLELEQQDAPASFYEIDVFAVKDVKQLLD--IKVAPSVIMFINGE-KVESFSCGPKRFDLVAVKV 101          
BLAST of mRNA_C-linearis_contig8.15816.1 vs. uniprot
Match: A0A7S4A7N2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7N2_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 4.170e-13
Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 0
Query:   65 ERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQDANVKFFEMDWMKTRDLCKSLQKQVKKLPHLELYVGQRGRLESFVCGPSKSALLKDKLDKLV 172
            E  F      +  DK+V IK YAG+CRACK    +F  L+ +F E+ A   F+E+++   +DLC+ L   +KKLP ++ + G  G + + +CGPSK   ++ KL+ L+
Sbjct:  118 EDTFLAAMSKSAGDKVVAIKFYAGWCRACKTIAPRFERLAKEFGEEAA---FYEIEFSANKDLCRRLD--IKKLPCVQFFRGAEGHVATVMCGPSKFPDVRLKLEDLL 220          
BLAST of mRNA_C-linearis_contig8.15816.1 vs. uniprot
Match: A0A7S0J7Q1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J7Q1_9EUKA)

HSP 1 Score: 73.9 bits (180), Expect = 1.860e-12
Identity = 49/139 (35.25%), Postives = 83/139 (59.71%), Query Frame = 0
Query:   42 AAAVGSTGPKDL----SGAPV-------EVIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQDANVKFFEMDWMKTRDLCKSLQKQVKKLPHLELYVGQRGRLESFVCGPSKSALLKDKLD 169
            AA   ++GP+ +    S APV       ++ D A+ Y   + E   E+K+V+IK +A +CRACKA   K++ ++ D+ E    ++F E+ +   + LCKSL   +K LP++E+  G  G++E F CGPSK + L+++L+
Sbjct:   67 AARTRTSGPRPVFVRSSAAPVASHRALTQLSDDAQ-YQAKIDEATRENKVVIIKFHASWCRACKAMAPKYQRVAEDWPE----LEFCEILFDNNKKLCKSLG--IKILPYVEVIGGTLGKVEGFSCGPSKISRLQERLE 198          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLZ5_ECTSI4.010e-9187.82Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JEA9_9PHAE9.180e-8888.39Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A2V3IJC0_9FLOR1.960e-1735.90Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracil... [more]
A0A7S3ATR9_9EUKA9.230e-1739.09Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2GHN9_9EUKA2.960e-1637.96Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S4C0Q1_CHRCT5.150e-1637.61Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3TUC7_9SPIT2.170e-1436.36Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A836C9F2_9STRA1.880e-1336.63Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
A0A7S4A7N2_9STRA4.170e-1337.04Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S0J7Q1_9EUKA1.860e-1235.25Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 46..175
e-value: 1.5E-10
score: 42.7
NoneNo IPR availablePANTHERPTHR43601FAMILY NOT NAMEDcoord: 51..199
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 51..199
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 69..163
e-value: 1.8E-9
score: 37.5
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 33..173
score: 9.835
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 51..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:3664035..3666340 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15816.1mRNA_C-linearis_contig8.15816.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 3664035..3667569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15816.1 ID=prot_C-linearis_contig8.15816.1|Name=mRNA_C-linearis_contig8.15816.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=226bp
FNRVSIPPPPASSAAGAAGLGDRGGYQARGAASTVSRPAVAAAAVGSTGP
KDLSGAPVEVIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKF
RLLSLDFQEQDANVKFFEMDWMKTRDLCKSLQKQVKKLPHLELYVGQRGR
LESFVCGPSKSALLKDKLDKLVADPKDPSLGEAPIPDEDSLAEEAKEAKE
PAASTSTSTSKSKSKSKSSQKEADL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf