prot_C-linearis_contig8.15811.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15811.1
Unique Nameprot_C-linearis_contig8.15811.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length2171
Homology
BLAST of mRNA_C-linearis_contig8.15811.1 vs. uniprot
Match: D7G8G0_ECTSI (Bromodomain and PHD finger-containing protein 1, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G0_ECTSI)

HSP 1 Score: 832 bits (2148), Expect = 6.610e-271
Identity = 567/1147 (49.43%), Postives = 681/1147 (59.37%), Query Frame = 0
Query: 1056 MGVHQTCYGISEIPTKEWXXXXXXXXXXXSTLACRFCPVKGGALKRCTDDSWGHILCAFWIPECCFLDPQKMEPIGSISRKGQAGGVEKFLPTFRARKCYVCGTSAGSAIRCHASSCKFHLHPMCGSKAGSVYMEIETTMKRGFDGTEHVSVNLVARCPRHSKNKAKGTPGSVYRGSIIGSTADPLSIIDKALEVKDPEL-GGFALAGKVTWFDPVRSKYCIVASGHSGGGGSGAISSGGGEPKEGCSHWITVDKLVEAKAIGVQKNGKRFELECLPLLEGEEAE----SGQLDNGVKIERNDEEGDGDKETDVLAAGGEGENKTGTCKREGGASVGLEEAGPNESDAETSAAGKRRRTDTRPPPALPSDVAPTKHAASRPEEQSPPARATPELGSQPPSTVPGEDVETARLVSSRG-----EGSKLSTEYKVASESQSGEPRSTEIEKRSEATRSPTRLLPSVQIQEQTDAFARYPIRGRRRRPENLTFDPAVQRGLEGVPSAKRPRKGGEEDQSLDVTADAGPDPSGTQ-LACPEEAAVTCDSVFSLPSGVCGA-----PQVQPT------NATGVVRHQSGSVFDCQPGWPHGMGLLGQVPVMRVRAVRVPGGGDATYFASAYASIAEGVVCDKRSAPSFSFPFEELENMRLTGGATQ--PQRGTHPDSLIDPPDQSCKLSGGLHGPEGKEGTPDDAETRKTGEAEASRTPLPSK-EGQGEKXXXXXXXQGEEVAADQTSNISSNSDDVEEGEIGSLSNGRAGSMPPSLVREDVSVGGGVETLSSAGEQVAKEGTKSN---EQNVQPACQNSRMTGEAERATEAEEMEEMDISSDDVSCGGFEGVEPASPCISEDXXXXXXXVGTRWGVFRVGGTPPKISRVDTQSTDPTPDATIAHPVPSPTATETAQVLRGPSSAVESDEDEENSDSCPENVDVSDEVEPEGRESNGFEATAGA----TSEGSSMQRLEGELSAPEKEPEIAVVQPIEPQQTGVTLALRSIVREQLQGVLRSASKGEEAALAGGDGNDVLERIASDTEDELFRRLYKDITGGREYKAKYKQLLLSLGNVRNYRLVASVLAGNTTPVDLATKDAVGLLNSLSSSLNCLAIPLAGRQRQGYSAGSPAGKGQKGKGKRRGKMMLL 2170
            MGVHQTCYGISEIPTKEW           STLACRFCP +GGALKRCTD SWGHILCAFWIPECCFLDPQKMEPIGSI+R+GQAGGVEKFLP+FR+RKC+VCGTS GSAIRCH++SCKFHLHPMCGSKAGSVYMEIETTMKRG DGTEH SVNLVA+CPRH+K+K  G  G     S + S ADPLS++ K +E+ DPE  G  AL GKVTWFDP RS+YCIV S   GG G    S   GEPKE  +HWI   KL+EAKA+G+ KNGK F LE LP  E    E    SG  D+ VK+E+ + E    +++  L A  +GE K    K     +  L++  P      T+  GKRRRTD     ++PSD +P K  A R   QS  ARA+  LG    +  P  + E++     +G     EG +++  + +                     + P+RLLPSV + EQ D F+RYPIRGR RRP     DP   + LE VP  KR R+G +    + V ADAG  PS +  L  P +A V        P    GA     PQ +P+      +A    + + GS +  +PGWPHGM LL  VPVMRVR V VPGGG+ATY+ASAYAS AE V+ + RSAP  +F FEEL  + LT    +   QRGT  D L D P++SC+  G     E +     D+     G    SR   P + + Q  K   XXXX                  D   GEI SL + RAG MPPS         GGVE     G  VA+E T        +V  + Q S  + ++  AT+A ++EEM++SSD  S  GFE  E ASPCIS+D          RWG     G     +   T +  P+  + +       TA    + L   +  VE  +   ++        VS +  P    S G  AT       T E  +  R   E S  EKEPEI +  P  PQQTGVTLALR+IVREQLQGVLRSASKGEEAALA G+GN+V+E IA+  E+ELF RLYKD TGGREYKAKYKQLLLSLGNVRNYRLVASVLAGNTTPVDLATKDAVGLLNSLSSSLNCLAIPLAGR RQ +   SPAG G+ G GKRRG+M+LL
Sbjct:    1 MGVHQTCYGISEIPTKEWYCSPCSAGVHPSTLACRFCPNRGGALKRCTDGSWGHILCAFWIPECCFLDPQKMEPIGSINRRGQAGGVEKFLPSFRSRKCHVCGTSGGSAIRCHSASCKFHLHPMCGSKAGSVYMEIETTMKRGVDGTEHESVNLVAKCPRHNKSKVYGRAGKGR--SAVASAADPLSVMGKTIEITDPERDGAVALVGKVTWFDPNRSRYCIVTSRRVGGDGDSCDS---GEPKESRTHWIAAKKLIEAKAVGLHKNGKTFALEPLPSWEEHRTETDTDSGGQDSDVKVEQEEHEKVA-QDSSGLTAEEQGEKKEANSKD----AAHLDKTKPEMEHGGTTTVGKRRRTDPT-DSSIPSDESPAKRTA-RVGVQSRQARAS--LGLDSHNLQP--EAESSLSPCLQGSCAEMEGRRMAARHPI---------------------QEPSRLLPSVHLAEQPDPFSRYPIRGRLRRPTTPVPDPKEPQALEDVPRTKRQRRGEDPGHRVAVAADAGSGPSSSMGLTWPGDAVVAGACNEPAPENSDGAQSRFIPQARPSIEVRTVSAAEAEQCEGGSAYVLEPGWPHGMQLLAHVPVMRVRTVLVPGGGEATYYASAYAS-AESVIGNMRSAPRSTFRFEELGELSLTDRVKERPAQRGTMADFLDDHPERSCQPDGTREARECESSAQGDS-----GNFSPSRIARPGELQTQQAKEREXXXXXXXXXXXXXXXXXXXXXXD---GEITSLFDVRAGVMPPSPGSGKTIDDGGVEMAPGIGGLVAEEETGRQGLLAHDVHHSSQ-SNTSDDSNNATKATDVEEMEVSSDGGSYCGFEIAEAASPCISDDEDD------VRWGRSDDRGD----ANGTTSALPPSSSSQVG------TAANLQERLSELADCVEDSKSAADT--------VSKDTNPADDPSIGSAATVEQALPDTCEDGNTSRHRQEGSTVEKEPEITLKPPPAPQQTGVTLALRAIVREQLQGVLRSASKGEEAALANGNGNEVIEEIATGAEEELFGRLYKDSTGGREYKAKYKQLLLSLGNVRNYRLVASVLAGNTTPVDLATKDAVGLLNSLSSSLNCLAIPLAGRHRQNFQPSSPAGNGRNGSGKRRGRMVLL 1076          
BLAST of mRNA_C-linearis_contig8.15811.1 vs. uniprot
Match: A0A6H5K8Q2_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Q2_9PHAE)

HSP 1 Score: 801 bits (2068), Expect = 3.450e-259
Identity = 555/1125 (49.33%), Postives = 672/1125 (59.73%), Query Frame = 0
Query: 1089 CRFCPVKGGALKRCTDDSWGHILCAFWIPECCFLDPQKMEPIGSISRKGQAGGVEKFLPTFRARKCYVCGTSAGSAIRCHASSCKFHLHPMCGSKAGSVYMEIETTMKRGFDGTEHVSVNLVARCPRHSKNKAKGTPGSVYRGSIIGSTADPLSIIDKALEVKDPEL-GGFALAGKVTWFDPVRSKYCIVASGHSGGGGSGAISSGGGEPKEGCSHWITVDKLVEAKAIGVQKNGKRFELECLPLLEGE----EAESGQLDNGVKIERNDEEGDGDKETDVLAAGGEGENKTGTCKREGGASVGLEEAGPNESDAETSAAGKRRRTDTRPPPALPSDVAPTKHAASRPEEQSPPARATPELGS---QPPSTVPGEDVETARLVSSRGEGSKLSTEYKVASESQSGEPRS-TEIEKRSEATR----SPTRLLPSVQIQEQTDAFARYPIRGRRRRPENLTFDPAVQRGLEGVPSAKRPRKGGEEDQSLDVTADAGPDPSGTQLACPEEAAVTCDSVFSLPSGVCGA-----PQVQPT------NATGVVRHQSGSVFDCQPGWPHGMGLLGQVPVMRVRAVRVPGGGDATYFASAYASIAEGVVCDKRSAPSFSFPFEELENMRLTGGATQ--PQRGTHPDSLIDPPDQSCKLSGGLHGPE------GKEGTPDDAETRKTGEAEASRTPLPSKEGQGEKXXXXXXXQGEEVAADQTSNISSNSDDVE---EGEIGSLSNGRAGSMPPSLVREDVSVGGGVETLSSAGEQVAKEGTKSNE---QNVQPACQNSRMTGEAERATEAEEMEEMDISSDDVSCGGFEGVEPASPCISEDXXXXXXXVGTRWGVFRVGGTPPKISRVDTQSTDPTPDATIAHPVPSPTATETAQVLRGP-SSAVESDEDEENSDSCPENVDVSDEVEPEGRESNGFEATAGA----TSEGSSMQRLEGELSAPEKEPEIAVVQPIEPQQTGVTLALRSIVREQLQGVLRSASKGEEAALAGGDGNDVLERIASDTEDELFRRLYKDITGGREYKAKYKQLLLSLGNVRNYRLVASVLAGNTTPVDLATKDAVGLLNSLSSSLNCLAIPLAGRQRQGYSAGSPAGKGQKGKGKRRGKMMLL 2170
            CRFCP +GGALKRCTD SWGHILCAFWIPECCFL PQKMEPIGSI+R+GQAGGVE+FLP+FR+RKC+VCGTS GSAIRCH++SCKFHLHPMCGSKAGSVYMEIETTMKRG DGTEH SVNLVA+CPRH+K+K  G  G     S + S ADPLS++ K +E+ DPE  G  AL GKVTWFDP RS+YCIV S   GG G    S   GEPKEG +HWI   KLVEAKA+G+ KNGK F LE LP  E      + ESG   + VK+E+ + E    +++  L A   GENK    K     +VGLEE          +  GKRRR D    P++PSD +P K  A R   QS  A+A+  L S   QP       + E++     +GEGS+ S        S+ G+  S  E+E RS A R     P+RLLPSV + EQ D F+RYPIRGR RRP     DP   + LE VP  KR R+G + +  + V ADAG  PS +        A  CD     P    GA     PQ +P+      +A    + +  SV+  +PGWPHGM LL  VPVMRVR V VPGGG+ATY+ASAYAS AE V+ + RSAP  +F FEEL  + LT    +   QRGT  + L + P++SC+  G   G E      G  G    +   + GE    +                   + EE   D+ S++ +++D      +GEI SL + RAG+MP            GVE     G  VA+E + S      +V  + Q S  T  +  AT+A ++EEM++SSD  S  GFE  E ASPCIS+D          RWG     G        D   T      T A P  S +   TA  L+   S   +  ED +++        VS +  P    S G  AT       T E  +  R   E S  E++PEI +  P  PQQTGVTLALR+IVREQLQGVLRSASKGEEAALA G+G++V+E+IA+  E+ELF RLYKD TGGREYKAKYKQLLLSLGNVRN RLVASVLAGNTTPVDLATKDAVGLLNSLSSSLNCLAIPLAGR RQ +   SPAG G+KG GKRRGKMMLL
Sbjct:   18 CRFCPNRGGALKRCTDGSWGHILCAFWIPECCFLHPQKMEPIGSINRRGQAGGVEQFLPSFRSRKCHVCGTSGGSAIRCHSASCKFHLHPMCGSKAGSVYMEIETTMKRGVDGTEHESVNLVAKCPRHNKSKVYGRAGKGR--SAVASAADPLSVMGKTIEITDPERDGAVALVGKVTWFDPNRSRYCIVTSRRVGGDGDSCDS---GEPKEGRTHWIAAKKLVEAKAVGLHKNGKNFALEPLPSWEKHRTETDKESGCQGSDVKVEQEEHEKVA-QDSSGLTAEERGENKEANSKD----AVGLEETKTEMEHGGRTTVGKRRRPDLT-DPSMPSDESPAKRTA-RVRLQSRQAQASQGLDSHNLQP-------EAESSLSPRLQGEGSQSSAVLGFGPTSEIGDAGSCAEMEGRSMAARHPIQEPSRLLPSVHLAEQPDPFSRYPIRGRLRRPTTPVPDPKEPQALEDVPRTKRQRRGEDPEHRVAVAADAGSGPSSSIGPGDAVVAGACDE--PTPGNSDGAQSRLIPQARPSMEVRTVSAAEAEQREGRSVYVLEPGWPHGMQLLAHVPVMRVRTVLVPGGGEATYYASAYAS-AESVIGNMRSAPRSTFQFEELGELGLTDRVKERPAQRGTMAEVLDEHPERSCEPDGTSKGRECDSSAQGDSGNFSPSRVARLGELHKQQA-----------------TEREEPPVDKASSVPADNDXXXXXXDGEITSLFDVRAGAMPLCPSSGKTIDDDGVEMTPGIGGLVAEEESGSKRLLAHDVHHSSQ-SNTTDNSNNATKATDVEEMEVSSDGGSYCGFEIAEAASPCISDDEDD------ARWGRSDYRG--------DANGT------TSAIPASSSSQVGTAANLQERLSELADCVEDSKSAADA-----VSKDTNPADDPSIGSAATVEQALPDTCEDGNTSRHRQEGSTVERDPEITLKPPPAPQQTGVTLALRAIVREQLQGVLRSASKGEEAALANGNGDEVIEKIATGAEEELFGRLYKDSTGGREYKAKYKQLLLSLGNVRNDRLVASVLAGNTTPVDLATKDAVGLLNSLSSSLNCLAIPLAGRHRQNFQPSSPAGNGRKGSGKRRGKMMLL 1077          
BLAST of mRNA_C-linearis_contig8.15811.1 vs. uniprot
Match: A0A6H5K8F6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F6_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 5.090e-115
Identity = 243/459 (52.94%), Postives = 288/459 (62.75%), Query Frame = 0
Query:  342 STEHLAPMSGHKR-ARAEYDRADQTRWGERIEHESLGDTTDTALAAVSYANAVAEGGAVGSLTSGAAAGLQS------------GGTRGVSPPASNPTAGQSPILTAVQDNITAGPLEEWEGDRMVSSDAAV-ASATAQPDSGASSNGTVPPKAAEASKATVPTSDTTQALSSNGLRRTTRGQKGSRASNHHDDMMHAMCMICLEKLNDASEGGRAKLLGLLDSCSHRYCYTCILEWSKITNKCPQCKARFHTIKAIKELRRSNDKYRGVAVRVEDRDQRYSFVDVRDVVVLDPEVACHPGCLVRLGVDALQQGWEFSVECEQCSNWYHGLCVGFRQEWEVPDLWFCRSCCGEVYEVITSPDAVPQPTASSILSAMSLVVNNSSLAPTSGQSSESQSQNLVVSSSLGEG-RAGEVTRSRGQVPEQDSGNMGVPCTNRTVVDTHPGSGSRSETGELVAEL 785
            S E  AP+S  +R  R E  ++      E  E +S GDT D ALAA SYANAVAE G  G   S   AGL++            GG  G S  A+  T   +  + A    I+ GP  E   DR  S+ +AV +S T Q  S A  NG      A +   T+    TT A    G+      +K + AS+ HDDMMHAMCMICLEKL+DA+EGG +KLLGLLD+CSHRYCYTCILEWSKITNKCPQCKARFHT+KA++ELRR+ND+YRGVAVRVEDRDQ YSFVDVRDVVVLDPEVACH GCLVR GVDA+QQGWEFSV+CEQCS WYHGLCVGFRQEWE+PDLW CR C GE Y++   PDA+ +P A    S  S   N+ S       +  +    L  S S  EG   GEV  SRGQVPEQ +     P  +R+V D   G G RS+ G  V+ +
Sbjct:  446 SAEQRAPISQSERDCRPEEKQSASVSSRESAECDSAGDTADVALAAFSYANAVAEAGGDGDPASSILAGLENERVWEQNQLVSDGGEEGSSRSAALETHATAAKM-AEDIAISPGPSRECAEDRTASATSAVISSVTTQLSSRALLNGE-----AASESTTLSAGGTTGACGPTGVTTAASREKPASASDRHDDMMHAMCMICLEKLSDAAEGGGSKLLGLLDACSHRYCYTCILEWSKITNKCPQCKARFHTVKAVRELRRTNDRYRGVAVRVEDRDQVYSFVDVRDVVVLDPEVACHVGCLVRRGVDAIQQGWEFSVQCEQCSTWYHGLCVGFRQEWEIPDLWICRPCRGESYQITLDPDAITEPAAIVARSRTSSSSNHGSTRGRRASAPSASHDRLPPSGSGQEGSEPGEVVGSRGQVPEQVNSIGDAPRISRSVSDGGQGIGPRSDQGRAVSNI 898          
BLAST of mRNA_C-linearis_contig8.15811.1 vs. uniprot
Match: D7G8F9_ECTSI (Splicing factor, arginine/serine-rich 2,rnap interacting protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F9_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 3.630e-93
Identity = 223/470 (47.45%), Postives = 262/470 (55.74%), Query Frame = 0
Query:  342 STEHLAPMSGHKR-ARAEYDRADQTRWGERIEHESLGDTTDTALAAVSYANAVAEGGAVGSLTSGAAAGLQS------------GGTR--------------------GVSPPASNPTAGQSPILTAVQD-NITAGPLEEWEGDRMVSSDAAV-ASATAQPDSGASSNGTVPPKAAEASKATVPTSDTTQALSSNGLRRTTRGQKGSRASNHHDDMMHAMCMICLEKLNDASEGGRAKLLGLLDSCSHRYCYTCILEWSKITNKCPQCKARFHTIKAIKELRRSNDK-----------------------YRGVAVRVEDRDQRYSFVDVRDVVVLDPEVACHPGCLVRLGVDALQQGWEFSVECEQCSNWYHGLCVGFRQEWEVPDLWFCRSCCGEVYEVITSPDAVPQPTASSILSAMSLVVNNSSLAPTSGQ--SSESQSQNLVVSSSLG--EGRAGEVTRSRGQVP 749
            S E  AP+S  +R  R E  ++      E  E +S GD  D ALAA SYANAVAE G  G   S   AGL++            GG                      G     S      +      +D  I+ GP  E   DR  S+ +AV +S T QP                          TT A    G+      +K + AS+ HDDMMHAMCMICLEKL+DA+EGG AKLLGLLD+CSHRYCYTCILEWSKITNKCPQCKARFHT+KA++ELRR+ND+                       YRGVAVRVEDRDQ YSFVDVRDVVVLDPEVACH GCLVR GVDA+QQGWEFSV+CEQCS WYHGLCVGFRQEWE+PDLW CR C GE Y++   PDA+ +P A   + A     + S+   T G+  S  S S + +  S  G  E   GE+   RGQVP
Sbjct:  491 SAEQRAPISQSERDRRPEEKQSASASSRESAECDSPGDMADVALAAFSYANAVAEAGGDGDPASSILAGLENERVWEQTQRVSDGGXXXXXXXXXXXXXXXXXXXXXXGEGSSRSAALGAHATAAKMAEDIAISPGPSRECAEDRTASTTSAVISSVTTQPX-----XXXXXXXXXXXXXXXXXXXGTTGACGPTGVTTAASREKRASASDRHDDMMHAMCMICLEKLSDAAEGGGAKLLGLLDACSHRYCYTCILEWSKITNKCPQCKARFHTVKAVQELRRTNDRVDRSPRPLSGSKTRFRRRERSPTYRGVAVRVEDRDQVYSFVDVRDVVVLDPEVACHVGCLVRRGVDAIQQGWEFSVQCEQCSTWYHGLCVGFRQEWEIPDLWICRPCRGESYQITLDPDAITEPAA---IVARGRTSSGSNHGSTRGRRASPPSASHDRLPPSVSGQEESEPGEMVSGRGQVP 952          
BLAST of mRNA_C-linearis_contig8.15811.1 vs. uniprot
Match: UPI001BE0E67B (bromodomain-containing protein 1 isoform X2 n=1 Tax=Coregonus clupeaformis TaxID=59861 RepID=UPI001BE0E67B)

HSP 1 Score: 132 bits (332), Expect = 4.800e-27
Identity = 73/198 (36.87%), Postives = 97/198 (48.99%), Query Frame = 0
Query: 1034 LCTIC-GFDTEPDNLIVYCSSCNMGVHQTCYGISEIPTKEWXXXXXXXXXXXSTLACRFCPVKGGALKRCTDDSWGHILCAFWIPECCFLDPQKMEPIGSISRKGQAGGVEKFLPTFRARKCYVCGTS-AGSAIRCHASSCKFHLHPMCGSKAGSVYMEIETTMKRGFDGTEHVSVNLVARCPRHSKNKAKGTPGSVY 1229
            +C IC   D +  N+I++C SCNM VHQ CYG+  IP  +W               C FCP KGGALK+  DD WGH++CA W+PE  F D   +EPI          GV    P      CY+C    AG+ I+CH  +C    H  C  KAG +YM++E   +    G+   SV   A C  H+       P ++Y
Sbjct:  215 VCCICMDGDGQDSNVILFCDSCNMAVHQECYGVPYIPEGQWLCRHCLQCPSRPA-ECVFCPNKGGALKKTDDDRWGHVVCALWVPEVGFSDTVFIEPID---------GVSNIPPARWKLTCYLCKEKGAGACIQCHKVNCYTAFHVSCAQKAG-LYMKMEPVKEFTETGSPTFSVKKTAFCSAHTPKGCTWRPLAIY 401          
BLAST of mRNA_C-linearis_contig8.15811.1 vs. uniprot
Match: A0A1S3PD03_SALSA (bromodomain-containing protein 1 isoform X1 n=42 Tax=Salmonidae TaxID=8015 RepID=A0A1S3PD03_SALSA)

HSP 1 Score: 130 bits (328), Expect = 1.410e-26
Identity = 73/198 (36.87%), Postives = 97/198 (48.99%), Query Frame = 0
Query: 1034 LCTIC-GFDTEPDNLIVYCSSCNMGVHQTCYGISEIPTKEWXXXXXXXXXXXSTLACRFCPVKGGALKRCTDDSWGHILCAFWIPECCFLDPQKMEPIGSISRKGQAGGVEKFLPTFRARKCYVCGTS-AGSAIRCHASSCKFHLHPMCGSKAGSVYMEIETTMKRGFDGTEHVSVNLVARCPRHSKNKAKGTPGSVY 1229
            +C IC   D +  N+I++C SCNM VHQ CYG+  IP  +W               C FCP KGGALK+  DD WGH++CA W+PE  F D   +EPI          GV    P      CY+C    AG+ I+CH  +C    H  C  KAG +YM++E   +    G+   SV   A C  H+       P ++Y
Sbjct:  215 VCCICMDGDGQDSNVILFCDSCNMAVHQECYGVPYIPEGQWLCRHCLQCPSRPA-ECVFCPNKGGALKKTDDDRWGHVVCALWVPEVGFSDTVFIEPID---------GVSNIPPARWKLTCYLCKEKGAGACIQCHKVNCYTAFHVSCAQKAG-LYMKMEPFKEFTETGSPTFSVKKTAFCCAHTPKGCTRRPLAIY 401          
BLAST of mRNA_C-linearis_contig8.15811.1 vs. uniprot
Match: A9SIE6_PHYPA (Trithorax-like protein, histone-lysine N-methyltransferase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SIE6_PHYPA)

HSP 1 Score: 126 bits (317), Expect = 2.610e-26
Identity = 67/188 (35.64%), Postives = 98/188 (52.13%), Query Frame = 0
Query: 1033 DLCTICGFDTEPDN-LIVYCSSCNMGVHQTCYGISEIPTKE-WXXXXXXXXXXXSTLACRFCPVKGGALKRCTDDSWGHILCAFWIPECCFLDPQKMEPIGSISRKGQAGGVEKFLPTFRARKCYVCGTSAGSAIRCHASSCKFHLHPMCGSKAGSVYMEIETTMKRGFDGTEHVSVNLVARCPRHSK 1218
            D CT+C  D E DN L++ C  C+M VH  CYG  E+P  + W               C  CP+ GGA+K+ TD  W H++CA WIPE CF+D ++MEPI  I    +A   E++  T     C VC    G+ I+C   SC    HP+C   AG + ME++    + +  ++   + L+A C +H +
Sbjct:   54 DRCTVCYLDEEYDNNLLLQCDKCHMMVHMDCYGEQELPDGDLWLCNLCELDAPKPRPPCCLCPITGGAMKKTTDGRWAHLMCAMWIPETCFVDVKRMEPIHGI----KAVSKERWRLT-----CVVCKVLYGACIQCPVRSCTTAFHPLCARSAG-LCMELQEEKHKKYGKSD---MRLLAYCRKHKQ 228          
BLAST of mRNA_C-linearis_contig8.15811.1 vs. uniprot
Match: A0A1S3KN94_SALSA (bromodomain-containing protein 1-like isoform X1 n=45 Tax=Salmonidae TaxID=8015 RepID=A0A1S3KN94_SALSA)

HSP 1 Score: 130 bits (326), Expect = 2.670e-26
Identity = 72/198 (36.36%), Postives = 97/198 (48.99%), Query Frame = 0
Query: 1034 LCTIC-GFDTEPDNLIVYCSSCNMGVHQTCYGISEIPTKEWXXXXXXXXXXXSTLACRFCPVKGGALKRCTDDSWGHILCAFWIPECCFLDPQKMEPIGSISRKGQAGGVEKFLPTFRARKCYVCGTS-AGSAIRCHASSCKFHLHPMCGSKAGSVYMEIETTMKRGFDGTEHVSVNLVARCPRHSKNKAKGTPGSVY 1229
            +C IC   D +  N+I++C SCN+ VHQ CYG+  IP  +W               C FCP KGGALK+  DD WGH++CA W+PE  F D   +EPI          GV    P      CY+C    AG+ I+CH  +C    H  C  KAG +YM++E   +    G+   SV   A C  H+       P ++Y
Sbjct:  216 VCCICMDGDGQDSNVILFCDSCNIAVHQECYGVPYIPEGQWLCRHCLQCPSRPA-ECVFCPNKGGALKKTDDDRWGHVVCALWVPEVGFSDTVFIEPID---------GVSNIPPARWKLTCYLCKEKGAGACIQCHKVNCYTAFHVSCAQKAG-LYMKMEPVKEVTETGSPTFSVKKTAFCCAHTPKGCTRRPLAIY 402          
BLAST of mRNA_C-linearis_contig8.15811.1 vs. uniprot
Match: A0A3P8YKV6_ESOLU (Bromodomain-containing protein 1-like n=6 Tax=Esox lucius TaxID=8010 RepID=A0A3P8YKV6_ESOLU)

HSP 1 Score: 129 bits (325), Expect = 3.490e-26
Identity = 72/198 (36.36%), Postives = 97/198 (48.99%), Query Frame = 0
Query: 1034 LCTIC-GFDTEPDNLIVYCSSCNMGVHQTCYGISEIPTKEWXXXXXXXXXXXSTLACRFCPVKGGALKRCTDDSWGHILCAFWIPECCFLDPQKMEPIGSISRKGQAGGVEKFLPTFRARKCYVCGTSA-GSAIRCHASSCKFHLHPMCGSKAGSVYMEIETTMKRGFDGTEHVSVNLVARCPRHSKNKAKGTPGSVY 1229
            +C IC   D +  N+I++C SCN+ VHQ CYG+  IP  +W              AC FCP KGGALK+  DD WGH++CA W+PE  F D   +EPI          GV    P      CY+C     G+ I+CH  +C    H  C  KAG +YM++E   +    G+   SV   A C  H+       P ++Y
Sbjct:  212 VCCICMDGDGQDSNVILFCDSCNIAVHQECYGVPYIPEGQWLCRHCLQCPSRPA-ACVFCPNKGGALKKTDDDRWGHVVCALWVPEVGFSDTVFIEPID---------GVSNIPPARWKLTCYLCKEKGVGACIQCHKVNCYTAFHVSCAQKAG-LYMKMEPVKEVTEMGSPTFSVKKTAFCCAHTPKGCTRRPLAIY 398          
BLAST of mRNA_C-linearis_contig8.15811.1 vs. uniprot
Match: A0A3B3V784_9TELE (Bromodomain-containing protein 1-like n=1 Tax=Poecilia latipinna TaxID=48699 RepID=A0A3B3V784_9TELE)

HSP 1 Score: 129 bits (323), Expect = 5.230e-26
Identity = 72/198 (36.36%), Postives = 94/198 (47.47%), Query Frame = 0
Query: 1034 LCTIC-GFDTEPDNLIVYCSSCNMGVHQTCYGISEIPTKEWXXXXXXXXXXXSTLACRFCPVKGGALKRCTDDSWGHILCAFWIPECCFLDPQKMEPIGSISRKGQAGGVEKFLPTFRARKCYVC-GTSAGSAIRCHASSCKFHLHPMCGSKAGSVYMEIETTMKRGFDGTEHVSVNLVARCPRHSKNKAKGTPGSVY 1229
            +C IC   D    N+I++C SCN+ VHQ CYG+  IP  +W               C FCP +GGALK+  DD WGH++CA W+PE  F D   +EPI          GV    P      CY+C    AG+ I+C   +C    H  C  KAG +YM +E   +    GT   SV   A C  H+       P +VY
Sbjct:  212 VCCICMDGDGADSNVILFCDSCNIAVHQECYGVPYIPEGQWLCRHCLQCPSRPA-ECLFCPNRGGALKKTDDDRWGHVVCAMWVPEVGFSDTVFIEPID---------GVRNIPPARWKLTCYLCKAKGAGACIQCDKINCYTAFHVSCAQKAG-LYMRMEPVKELTESGTTTFSVKKTAYCSSHTPEGCDRRPLNVY 398          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8G0_ECTSI6.610e-27149.43Bromodomain and PHD finger-containing protein 1, p... [more]
A0A6H5K8Q2_9PHAE3.450e-25949.33PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K8F6_9PHAE5.090e-11552.94RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G8F9_ECTSI3.630e-9347.45Splicing factor, arginine/serine-rich 2,rnap inter... [more]
UPI001BE0E67B4.800e-2736.87bromodomain-containing protein 1 isoform X2 n=1 Ta... [more]
A0A1S3PD03_SALSA1.410e-2636.87bromodomain-containing protein 1 isoform X1 n=42 T... [more]
A9SIE6_PHYPA2.610e-2635.64Trithorax-like protein, histone-lysine N-methyltra... [more]
A0A1S3KN94_SALSA2.670e-2636.36bromodomain-containing protein 1-like isoform X1 n... [more]
A0A3P8YKV6_ESOLU3.490e-2636.36Bromodomain-containing protein 1-like n=6 Tax=Esox... [more]
A0A3B3V784_9TELE5.230e-2636.36Bromodomain-containing protein 1-like n=1 Tax=Poec... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 527..574
e-value: 2.0E-6
score: 37.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 526..575
e-value: 1.8E-8
score: 34.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 527..575
score: 12.357
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 1034..1079
e-value: 1.4E-8
score: 44.5
coord: 624..678
e-value: 9.4E-4
score: 28.5
coord: 1153..1217
e-value: 1.1
score: 17.3
NoneNo IPR availablePFAMPF13831PHD_2coord: 1046..1078
e-value: 9.5E-12
score: 44.3
NoneNo IPR availablePFAMPF13832zf-HC5HC2H_2coord: 1088..1216
e-value: 1.2E-20
score: 73.7
NoneNo IPR availablePANTHERPTHR13793:SF107BR140, ISOFORM Acoord: 999..1219
NoneNo IPR availablePANTHERPTHR13793PHD FINGER PROTEINScoord: 999..1219
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 521..581
IPR036575Transcription elongation factor S-II, central domain superfamilyGENE3D1.10.472.30coord: 2024..2119
e-value: 8.5E-8
score: 34.4
IPR036575Transcription elongation factor S-II, central domain superfamilySUPERFAMILY46942Elongation factor TFIIS domain 2coord: 2024..2122
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 505..603
e-value: 3.1E-12
score: 47.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1085..1219
e-value: 3.6E-13
score: 51.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 627..677
e-value: 1.7E-8
score: 35.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1024..1084
e-value: 6.6E-16
score: 59.6
IPR003618Transcription elongation factor S-II, central domainPFAMPF07500TFIIS_Mcoord: 2026..2121
e-value: 4.7E-7
score: 30.3
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 552..561
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 1032..1081
score: 9.739
IPR034732Extended PHD (ePHD) domainPROSITEPS51805EPHDcoord: 1086..1217
score: 17.032
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 1031..1095
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 643..681

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:3632886..3642319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15811.1mRNA_C-linearis_contig8.15811.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 3630656..3642895 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15811.1 ID=prot_C-linearis_contig8.15811.1|Name=mRNA_C-linearis_contig8.15811.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2171bp
MEGVNGRATEDRPMRTSEAQEQQSSSDPKELSSTRPSSGSSSSCGVDPCG
DEPGDARPGKGLQNGERTTAENEEESCVVHPCSTEQAVLGKGGGSKLPAI
ERMENNVPPSAGSSGEGNGNGFSRGDTSIPPPYADIEESSLLKSAVGEGD
ALFGSTGSEAVQRSSNAQVVEAAPNGLSAADSGGKSQALVSRDIMERPGA
SAVWIASRDQAKRAGQEKSHSSPKGATAKAGVAVKKESDLAEEISTPRSP
SQPGRPWASPESRHDENSVADGALSDSARTSEEAGVPRAQTSGNGTISPA
RTRAVARTPPHDVSSYSVIATGADSHDGAACQALPGGSVWGSTEHLAPMS
GHKRARAEYDRADQTRWGERIEHESLGDTTDTALAAVSYANAVAEGGAVG
SLTSGAAAGLQSGGTRGVSPPASNPTAGQSPILTAVQDNITAGPLEEWEG
DRMVSSDAAVASATAQPDSGASSNGTVPPKAAEASKATVPTSDTTQALSS
NGLRRTTRGQKGSRASNHHDDMMHAMCMICLEKLNDASEGGRAKLLGLLD
SCSHRYCYTCILEWSKITNKCPQCKARFHTIKAIKELRRSNDKYRGVAVR
VEDRDQRYSFVDVRDVVVLDPEVACHPGCLVRLGVDALQQGWEFSVECEQ
CSNWYHGLCVGFRQEWEVPDLWFCRSCCGEVYEVITSPDAVPQPTASSIL
SAMSLVVNNSSLAPTSGQSSESQSQNLVVSSSLGEGRAGEVTRSRGQVPE
QDSGNMGVPCTNRTVVDTHPGSGSRSETGELVAELPPPPHTPASPASPAR
TSIQPAPPSTSPDAEASGRGSDAPYRSPQWTNLPPLERMLSLFGSEQSMP
ATPPQRPPVPVRANSAPPLSPPVVASSARGRGRPRGSRNKPAAATSPLAH
PPSSPQQTTGSPMLPTPPAHVDSAPSPPPTGDAAPAKVRGRPRGSKNKPP
VDTPATPALESQPERLGSSASSVETPVPPPQGDGQQNQEDSAQPSTEISL
ADDEPSRQDIIPQPPQPPAPSFLRSLEASEVNDLCTICGFDTEPDNLIVY
CSSCNMGVHQTCYGISEIPTKEWYCSPCSAGVHPSTLACRFCPVKGGALK
RCTDDSWGHILCAFWIPECCFLDPQKMEPIGSISRKGQAGGVEKFLPTFR
ARKCYVCGTSAGSAIRCHASSCKFHLHPMCGSKAGSVYMEIETTMKRGFD
GTEHVSVNLVARCPRHSKNKAKGTPGSVYRGSIIGSTADPLSIIDKALEV
KDPELGGFALAGKVTWFDPVRSKYCIVASGHSGGGGSGAISSGGGEPKEG
CSHWITVDKLVEAKAIGVQKNGKRFELECLPLLEGEEAESGQLDNGVKIE
RNDEEGDGDKETDVLAAGGEGENKTGTCKREGGASVGLEEAGPNESDAET
SAAGKRRRTDTRPPPALPSDVAPTKHAASRPEEQSPPARATPELGSQPPS
TVPGEDVETARLVSSRGEGSKLSTEYKVASESQSGEPRSTEIEKRSEATR
SPTRLLPSVQIQEQTDAFARYPIRGRRRRPENLTFDPAVQRGLEGVPSAK
RPRKGGEEDQSLDVTADAGPDPSGTQLACPEEAAVTCDSVFSLPSGVCGA
PQVQPTNATGVVRHQSGSVFDCQPGWPHGMGLLGQVPVMRVRAVRVPGGG
DATYFASAYASIAEGVVCDKRSAPSFSFPFEELENMRLTGGATQPQRGTH
PDSLIDPPDQSCKLSGGLHGPEGKEGTPDDAETRKTGEAEASRTPLPSKE
GQGEKDNEKEKEQGEEVAADQTSNISSNSDDVEEGEIGSLSNGRAGSMPP
SLVREDVSVGGGVETLSSAGEQVAKEGTKSNEQNVQPACQNSRMTGEAER
ATEAEEMEEMDISSDDVSCGGFEGVEPASPCISEDDDDDDDDVGTRWGVF
RVGGTPPKISRVDTQSTDPTPDATIAHPVPSPTATETAQVLRGPSSAVES
DEDEENSDSCPENVDVSDEVEPEGRESNGFEATAGATSEGSSMQRLEGEL
SAPEKEPEIAVVQPIEPQQTGVTLALRSIVREQLQGVLRSASKGEEAALA
GGDGNDVLERIASDTEDELFRRLYKDITGGREYKAKYKQLLLSLGNVRNY
RLVASVLAGNTTPVDLATKDAVGLLNSLSSSLNCLAIPLAGRQRQGYSAG
SPAGKGQKGKGKRRGKMMLL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR001965Znf_PHD
IPR036575TFIIS_cen_dom_sf
IPR013083Znf_RING/FYVE/PHD
IPR003618TFIIS_cen_dom
IPR017907Znf_RING_CS
IPR019787Znf_PHD-finger
IPR034732EPHD
IPR011011Znf_FYVE_PHD