prot_C-linearis_contig8.15807.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15807.1
Unique Nameprot_C-linearis_contig8.15807.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length816
Homology
BLAST of mRNA_C-linearis_contig8.15807.1 vs. uniprot
Match: A0A836CEG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG6_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.440e-30
Identity = 146/512 (28.52%), Postives = 219/512 (42.77%), Query Frame = 0
Query:   44 APMINAGFRAVLNEASRLGALDPPHGRTPMPDPKKITEEDAFASSSAGDNDNSDREETGTDVSEEPTAASSADLREGEXXXXXXXXXXXXXXKLLEYKFDYGFNPLVFLGEYLRKNNPAAVRAREEQRNADLEYLRHRAARCLAREAAVVELRDLVVHRQSGITHGPIVGEVSDCGGVVWATAFRSGQCTIELSRHEDF--RSICRQGVVKVDQSTELSAIVEFDDLDSSTTWYHRSYLHNPRKGFDGPAAGFCVKGKFSTLPERDEDSCGTFRLAVFSLHGLGLRS-ATAKHRSAIEKACSAVSAAKPRCCLVLGG----------PSRYQGVCLSTSNSIMRFYPGSFSDLQETAARIPVLSRLLQGNGILTASGLISKTVKRQKGKHHHSSAKLSKHGNSTRAEGTATAGGAKKTPNAKRSSTRAEGESLVGXGEEKRSSPPPDWPIRCPEAWGSR-PLGPTAEVFIIDARAGFLGEDQLSWVTEAVEESRRTWKVIACGVSVGFPVGP 541
            A +++ G RA+L EA RL  + PP+GR+ +PDP+K+ E                           PT           X    XXXXXXXX  L+ YK++YGFNPLV+LGE+L + +P  ++A +E +  + +      A+   R+ A  +LRDL   R+SG+  GP+VG +   GGV+WA   R+G   ++L   + F    I     V VD  +E SA +    L   T +++R  +  P  GF G   G   +G F TLP          R A   L  +G  S A   H  A+    + + A++P  CL LG           P  ++G    T     R    S+        + P L +L++  G LTA                  S  L  H  S      A A G+  T    + +T     +L    +         WP+    +  S   L P  E+++++ RAG L       + +A+  S  TWK++A G S+  P GP
Sbjct:  694 ATLLDEGIRALLAEAQRLDVVQPPYGRSVIPDPRKVLE---------------------------PTPEXXXXXV---XLQVTXXXXXXXXNALMAYKYEYGFNPLVYLGEWLLQRDPVRLQAEKEAQEREQQKEELAKAQSAVRKEAFAQLRDLTARRRSGVVAGPVVGAIDAQGGVLWAKTLRTGTLQLQLCADDGFAPEHILLTDTVDVDIMSECSARIPLGGLAPETPYHYRVCVDKPSHGFYGIDGGCFTQGTFRTLPAPSN------RAARSELTFMGFSSDALVDH--AMSGVFAGMLASEPNFCLFLGDMTAGTALSSRPGGFRGKLPPTEGREDRVR--SYRAFHAMIEQCPPLRQLVRSVGFLTA---------------WDDSRALHAHTGSNDGSSKAGAAGSCGTGGVSQDATVDTMAALQLVADY--------WPVHGKGSGFSMVTLSPGVELYVLETRAGTLPNASAQQLKKAILASTATWKLVAVGTSLSAPPGP 1142          
BLAST of mRNA_C-linearis_contig8.15807.1 vs. uniprot
Match: A0A7S3XL53_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL53_HETAK)

HSP 1 Score: 97.4 bits (241), Expect = 1.100e-19
Identity = 64/200 (32.00%), Postives = 103/200 (51.50%), Query Frame = 0
Query:   54 VLNEASRLGALDPPHGRTPMPDPKKITEEDAFASSSAGDNDNSDREETGTDVSEEPTAASSADLREGEXXXXXXXXXXXXXXKLLEYKFDYGFNPLVFLGEYLRKNNPAAVRAREEQRNADLEYLRHRAARCLAREAAVVELRDLVVHRQSGITHGPIVGEVSDCGGVVWATAFRSGQCTIELSRHEDFRSICRQGVVKV 253
            +L +   L  LDPP+GR   P   K  EE+  + SS+        +E G   S+E    S+ DL +                   ++K+DYGFNPLV+LG YL+KNNP  +  +++++   L YL+ RA   L ++   ++L++ +V  +SGI  GP+ G  +    V WA   + G   +++S +EDFR +    VV+V
Sbjct:    3 LLKKVIELDILDPPYGR---PHVAKFKEEEDESDSSS--------DEDGETSSDE----STVDLEDP------------------KFKYDYGFNPLVYLGTYLKKNNPIFISQKQKEKENSLAYLQKRADHALRQQEIALQLQEQMVRLRSGIQQGPVCGGATADSIVFWAKTTKPGNLVVQVSDYEDFRYVTETAVVEV 169          
BLAST of mRNA_C-linearis_contig8.15807.1 vs. uniprot
Match: A0A7S2MF24_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MF24_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 6.460e-18
Identity = 56/172 (32.56%), Postives = 89/172 (51.74%), Query Frame = 0
Query:  139 EYKFDYGFNPLVFLGEYLRKNNPAAVRAREEQRNADLEYLRHRAARCLAREAAVVELRDLVVHRQSGITHGPIVGEVSDCGGVVWATAFRSGQCTIELSRHEDFRSICRQGVVKVDQSTELSAIVEFDDLDSSTTWYHRSYLHNPRKGFDGPA-AGFCVKGKFSTLPERDED 309
            ++ +++GFNP+V LG YLR NNP  +  R  Q+   + YL+ R    L  E     +   V    SGIT GP+ G VS     +WA +   GQ   E+S  EDF ++  +  V+VD    L+  V+   L  ++  Y+R+YL N +         G  ++GK +TLP+ +++
Sbjct:    8 KFIYEFGFNPVVQLGNYLRINNPVFIEKRRNQKAEAVAYLQKRGQAALKIETTFQSILARVKTMCSGITLGPVCGSVSYDSVKLWAASKSPGQIIFEISYQEDFAALSDRVGVEVDDEIGLTGCVQIGHLHPASVVYYRAYLENDKGSTPIRLDRGEFIRGKVTTLPDPEDE 179          
BLAST of mRNA_C-linearis_contig8.15807.1 vs. uniprot
Match: A0A7S3GMX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GMX5_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.580e-9
Identity = 57/223 (25.56%), Postives = 99/223 (44.39%), Query Frame = 0
Query:   46 MINAGFRAVLNEASRLGALDPPHGRTPMPDPKKITEEDAFASSSAGDNDNSDREETGTDVSEEPTAASSADLREGEXXXXXXXXXXXXXXKLLEYKFDYGFNPLVFLGEYLRKNNPAAVRAREEQRNADLEYLRHRAARCLAREAAVVELRDLVVHRQSGITHGPIVGEVSDCGGVVWATAFRSGQCTIELSRHEDFRSICRQGVVKVDQSTELSAIVEFDDL 268
            +++ G   +L EA +   LDPP+GR   P P  +  ED F    A  +D         DV  EP                             E+KF+YGF+PL FL +++  ++P +V  R +++ A  ++L+ RA     + +   +L  L   + SGI  GPI+   S    +V     + G+   ++S+  DF+ + ++  V VD   + S +   +D+
Sbjct:   14 IVHDGIAKLLAEAKKKDCLDPPYGREAFPTP--LITEDQFIQDGALQSD---------DV--EP-----------------------------EFKFEYGFDPLKFLSDFIVWSHPNSVEDRRQKKIAAAKFLQLRADHARLQLSISRDLSQLANDQSSGILWGPIITPTSSTSVMVSCKPIKLGKVIFQISKFRDFKEVLQREEVFVDSLNDESEVATLEDI 194          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CEG6_9STRA2.440e-3028.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XL53_HETAK1.100e-1932.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2MF24_9STRA6.460e-1832.56Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3GMX5_9STRA2.580e-925.56Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR43606FAMILY NOT NAMEDcoord: 200..309
NoneNo IPR availablePANTHERPTHR43606FAMILY NOT NAMEDcoord: 504..554
NoneNo IPR availablePANTHERPTHR43606:SF1coord: 200..309
NoneNo IPR availablePANTHERPTHR43606:SF1coord: 504..554

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:3598354..3604525 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15807.1mRNA_C-linearis_contig8.15807.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 3598354..3604525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15807.1 ID=prot_C-linearis_contig8.15807.1|Name=mRNA_C-linearis_contig8.15807.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=816bp
MSTAVLEGGSSQTIIGSDNISSKSSGKKGNTTTSSTALDLASIAPMINAG
FRAVLNEASRLGALDPPHGRTPMPDPKKITEEDAFASSSAGDNDNSDREE
TGTDVSEEPTAASSADLREGEEEDDEEDDDDDNDDKLLEYKFDYGFNPLV
FLGEYLRKNNPAAVRAREEQRNADLEYLRHRAARCLAREAAVVELRDLVV
HRQSGITHGPIVGEVSDCGGVVWATAFRSGQCTIELSRHEDFRSICRQGV
VKVDQSTELSAIVEFDDLDSSTTWYHRSYLHNPRKGFDGPAAGFCVKGKF
STLPERDEDSCGTFRLAVFSLHGLGLRSATAKHRSAIEKACSAVSAAKPR
CCLVLGGPSRYQGVCLSTSNSIMRFYPGSFSDLQETAARIPVLSRLLQGN
GILTASGLISKTVKRQKGKHHHSSAKLSKHGNSTRAEGTATAGGAKKTPN
AKRSSTRAEGESLVGGGEEKRSSPPPDWPIRCPEAWGSRPLGPTAEVFII
DARAGFLGEDQLSWVTEAVEESRRTWKVIACGVSVGFPVGPVVEPEEEEE
ARINAAAVKIQARLRSHLRSKTPPPSPDTTTTTTTTATKKSAATPSGGGS
GGGGGGGVQQGGSPPPSYADKESSRSSPVAVDAGGASPGSGGGGGGVAAR
GGGPGTLENETNISRATVQMQSLVSQLHASGCSNVVLVTPARSRPHALSF
LSGHEAQGRFPVYELGCSALVPLPLGTKDTGSAQGSGSGKNETDEERPEA
CPDLAPRVLMPELETLVSARGDGDGGGLACTLSFGREEGREDWLSFVVGG
AGGEEVASLTLPAAP*
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