prot_C-linearis_contig8.15805.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15805.1
Unique Nameprot_C-linearis_contig8.15805.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length375
Homology
BLAST of mRNA_C-linearis_contig8.15805.1 vs. uniprot
Match: A0A6H5KHA4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHA4_9PHAE)

HSP 1 Score: 412 bits (1060), Expect = 1.250e-141
Identity = 206/296 (69.59%), Postives = 240/296 (81.08%), Query Frame = 0
Query:   73 IATLGVFFTLPEQGITSPEILTRCSATPVRRTPSAPLRFVAAAHAVMPWAFPGYHDGSHAWLNFIDESHVRYYAELRDPLTGTILTQHELVNLAKHPSRDVAALGLKGANDDXXXXXXXXXDEERRVLEDIRSRGVPFSPLPLRQRLIGQSDALQIVGYEVRESPGAIGQGEDPGMMMVRAKGELAARTAVQAFVSTNHATLNPGMCGAAVLDEGMELCGCVEGVVPTAPPEAEVEDHVRALQGMPCVVEWKDLDALLEASMVGADSAD-DGADDDLCSGDKLDRGSRSPVGKRQD 367
            +ATLGVFFTLP+QG+ +PEILTRCSATPVR+T S+PLRF+AAAHAV+PWAFPGYHD SHAWL FIDE++VRYYAELRDP TG +L QHEL++LA+HPSRD+AALGLKG +D          D E R L D+ S+G+PFSPLPLR+RLI  S++L+IVGYEVRE PG +GQGEDPGMMMVRAKG+LAARTA+QAFV T HATLNPGMCGAAVLD   ELCGCVEGVVPTAPPEA VE HVRALQGMPCVVEWKDLD LL A+M   D  D  G+  D+   D  +   + P+  R++
Sbjct:    1 MATLGVFFTLPDQGVNTPEILTRCSATPVRQTTSSPLRFLAAAHAVVPWAFPGYHDESHAWLKFIDETNVRYYAELRDPFTGAVLAQHELISLARHPSRDMAALGLKGGDD---------GDGESRFLRDVGSKGIPFSPLPLRRRLIEPSESLRIVGYEVREQPGGLGQGEDPGMMMVRAKGDLAARTAMQAFVGTEHATLNPGMCGAAVLDSDFELCGCVEGVVPTAPPEAAVEAHVRALQGMPCVVEWKDLDTLLTATMGDKDDGDVAGSGGDVGKQDARETWPKKPLSSREE 287          
BLAST of mRNA_C-linearis_contig8.15805.1 vs. uniprot
Match: D7G6F8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6F8_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 4.730e-62
Identity = 101/127 (79.53%), Postives = 110/127 (86.61%), Query Frame = 0
Query:  215 LRQRLIGQSDALQIVGYEVRESPGAIGQGEDPGMMMVRAKGELAARTAVQAFVSTNHATLNPGMCGAAVLDEGMELCGCVEGVVPTAPPEAEVEDHVRALQGMPCVVEWKDLDALLEASMVGADSAD 341
            LR+RLI  S++L+IVGYEVRE PG +GQGEDPGMM+VRAKG+LAARTA+QAFV T HATLNPGMCGAAVLD   ELCGCVEGVVPTAPPEAEVE HVRALQGMPCVVEWKDLD LL A+M   D  D
Sbjct:   25 LRRRLIDPSESLRIVGYEVREQPGGLGQGEDPGMMIVRAKGDLAARTAMQAFVGTEHATLNPGMCGAAVLDSDFELCGCVEGVVPTAPPEAEVEAHVRALQGMPCVVEWKDLDTLLTATMGDKDDGD 151          
BLAST of mRNA_C-linearis_contig8.15805.1 vs. uniprot
Match: A0A6U0VMV8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VMV8_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.720e-8
Identity = 78/281 (27.76%), Postives = 121/281 (43.06%), Query Frame = 0
Query:   79 FFTLPEQGITSPEILTRCSATPVRRTPSAPLRFVAAAHAVMPWAFPGYHDGSHAWLNFIDESHVRYYAELRDPLTGTILTQHEL-VNLAKHPSRDVAALGLKGANDDXXXXXXXXXDEERRVLEDIRSRGVPFSPLPLRQRLIGQSDALQ-------IVGYEVRESPGA-------------------IGQG----EDPGMMM---------VRAKGE-LAARTAVQAFVSTNHATLNPGMCGAAVLDEGMELCGCVEGVVPTAPPEAEV-EDHVRALQGM 317
            +F LPEQG++SPE+L+R   T +    S  L  + ++H   P+ +P Y+ G   WL+ + +  V Y  ELRD L G ++    L  ++  H SRD+  +GL                E+   LE +          PL ++ + Q  A Q       I G+EV E  G                     GQG    ED    +         V AKG+ + AR A++         L  GMCG+ ++D   ++ G VEGV+      A++ E+  +AL+ M
Sbjct:   35 YFFLPEQGMSSPELLSRTGCTILDGKRSGSLVMLTSSHVAAPFRWPQYY-GDVPWLHHVRQDCVTYALELRD-LQGEVVDTAPLPASVVHHESRDICVMGLP---------------EDLPFLEHLE---------PLVRQDLSQDAASQGAEKVYYIHGFEVGEMAGEDEEKTXXXXXXXXXXXEERTGQGSVSTEDDRRPLKPLNVEARFVAAKGDTIYARPAME---------LPFGMCGSPMVDADGKVAGVVEGVIQGPAANAQITEEQRQALEKM 280          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KHA4_9PHAE1.250e-14169.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G6F8_ECTSI4.730e-6279.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U0VMV8_9STRA3.720e-827.76Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:3594810..3597570 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15805.1mRNA_C-linearis_contig8.15805.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 3594315..3597944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15805.1 ID=prot_C-linearis_contig8.15805.1|Name=mRNA_C-linearis_contig8.15805.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=375bp
MVAARIPLVLRRCCPRPLEVRRVLIDGNHSSGRRWRGQFVGGMRLLCSST
SPSGDAAGAGVEADDMPSLREYIATLGVFFTLPEQGITSPEILTRCSATP
VRRTPSAPLRFVAAAHAVMPWAFPGYHDGSHAWLNFIDESHVRYYAELRD
PLTGTILTQHELVNLAKHPSRDVAALGLKGANDDDNDEGEGEGDEERRVL
EDIRSRGVPFSPLPLRQRLIGQSDALQIVGYEVRESPGAIGQGEDPGMMM
VRAKGELAARTAVQAFVSTNHATLNPGMCGAAVLDEGMELCGCVEGVVPT
APPEAEVEDHVRALQGMPCVVEWKDLDALLEASMVGADSADDGADDDLCS
GDKLDRGSRSPVGKRQDNLQAGNV*
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