prot_C-linearis_contig8.15724.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15724.1
Unique Nameprot_C-linearis_contig8.15724.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length746
Homology
BLAST of mRNA_C-linearis_contig8.15724.1 vs. uniprot
Match: A0A6H5J8K7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8K7_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 3.690e-95
Identity = 346/808 (42.82%), Postives = 410/808 (50.74%), Query Frame = 0
Query:   39 NRAPSTPASHGRESYPGQSALDNNGGGSPFTPADRANGRWPSAAWSTPPPGSSGSNA--------GEGHVTAARRRLVEDVYGGGGMGAALGGTGYRRASTGSHGVRSVGAGSHTSDTRPEQVGAGAGGESTSFERPDGAA--SQGGSSYLRTGAGVQNLRESEHAENKLQKRAAALEQQRALEAQIAAKARAK----------------------------REXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYXXXXXXXXXXXXXXX----RHPNDEEVGKNPRAPAYGGSTSALDDSREAAAPAGYPSNGDIGVGGDLRQRQMRHQQRRAADLAPPPDRIGLGSVSGIEL-ETPRRRSNVPDVDDLPAGAQARAQVLRSSPPDRSGGGGVTPTPRA------------GSASSARHGKASPAASTASDRFKRGSGLEGTNSPVAEG---VRGKTSTAAAAAFEGSVGGAPPGPPLQTRSLLVPVSSAELFPPFAAS---------------------GGRRGNLDDHLVASPGSFSFARGAAEPPQDEMDAFVTKWQDEHLRRRGFQGQR------------------------RQQDGG--ARPPGANERHPSSSPAGRTVCRSPPRSLLGGSRARGGYASGGRGGGSAVPGGNAGKLGDLEESLAATSRMVNPPSLPRPPPSISHAGESADAGDGRQAQR-RLGGXXXXXXXXXANVSEQSLTSDSILFYLSGQQREAMAEATATPSSPMPAAGRFSAANGAVLKSRSSGISASQLGLPRESSEVDG 740
            NR   TP S GRE+ PG S      GG    P  R    WPS AWSTP                  +G ++AARRRLVEDVYGGGGMGAALGGTGYRRASTG +G  S GA    S T P  VG    G++ +    +GAA  + GG SYLRTGAGVQ+LRESEH ++K Q+RAAALEQQRALEAQIAAKA A+                             +                             XXXXXXXXXXXXXXGLY  XXXXXXXX          H +D E     RAPA+GGST   +DS      AGY    D G  GD   RQ   Q R+A D A P  R G  ++ G       + RSN+PDVDDLPAGA ARAQVLRSSPP+R+     TP+P +            G  S  R G  SPAA+ A D F  G+G  G ++P AE    VR +T+ A A       G    G PL+ RS+L+P+SS  LFPPF                         G RG      V+     + A G   PPQDEMDAFVT+WQ EHLRRR                              R+ DG     P  ++     SSP GR VC SP R  L    +R      GRG  +AVPGG+A   G+LEESLAATSRMVNPPSLPRPP      GE      G +++R R  G         A++SEQSLTSDSILFYLSGQQ+E+MA +    +    A GR  A +   L++  SGI+ ++LG  +ESSEVDG
Sbjct:  520 NRTLFTPRSDGRENRPGHSV-----GGPSAGPPLRDG--WPSEAWSTPXXXXXXXXXXXXXXXXXSDGQLSAARRRLVEDVYGGGGMGAALGGTGYRRASTGDYGAGSGGA-RPQSATGPSVVGGERLGDARAAGGVEGAAVTAGGGPSYLRTGAGVQSLRESEHGDSKWQRRAAALEQQRALEAQIAAKASARXXXXXXXXXXXXXXARLSLRVSTFRKECNKMWGTGRVLNLLAGDGTDFMPMQVEAEADEXXXXXXXXXXXXXXGLYRQXXXXXXXXRVGSGGRRQSHKDDGEDAAFSRAPAHGGSTPVANDSSSVGVAAGYFPPSDGGGRGDSDVRQGELQHRQAIDGAFPSGRRGGNAIGGSGGGRQAQHRSNIPDVDDLPAGAHARAQVLRSSPPNRTPADTSTPSPSSWRPVSARSAVGGGLVSKERRGGRSPAAA-APDDFDEGTG-RGGDAPAAEESFPVRRRTTPAPALGDNRDDGAR--GSPLRARSILLPLSSPTLFPPFPGDTDADIVRGPPADSPGLAQECFAGGRGAAHRDRVSPAAEAAGAAGGVHPPQDEMDAFVTRWQVEHLRRRSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKADGNDYCLPSSSSF----SSPGGRAVCLSPSRGALPARSSRAVGVVRGRGF-AAVPGGDA---GELEESLAATSRMVNPPSLPRPPTGAHDDGEGDGGRSGTRSRRQRPAGPPSGVEDDAADLSEQSLTSDSILFYLSGQQQESMAASPLMVAEE--ATGREYAKSARTLENLGSGIATNRLG--KESSEVDG 1303          
BLAST of mRNA_C-linearis_contig8.15724.1 vs. uniprot
Match: D8LLY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY9_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 3.250e-89
Identity = 371/792 (46.84%), Postives = 442/792 (55.81%), Query Frame = 0
Query:   39 NRAPSTPASHGRESYPGQSALDNNGGGSPFTPADRANGRWPSAAWSTPPP---------------------GSSGSNAGEGHVTAARRRLVEDVYGGGGMGAALGGTGYRRASTGSHGVRSVGAGSHTSDTRPEQVGAGAGGESTSFERPDGAA--SQGGSSYLRTGAGVQNLRESEHAENKLQKRAAALEQQRALEAQIAAKARAKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYXXXXXXXXXXXXXXXRH---PNDE-EVGKNPRAPAYGGSTSALDDSREAAAPAG-YPSNGDIGVG-GDLRQRQMRHQQRRAADLAPPPDRIGLGSV--SGIELETPRRRSNVPDVDDLPAGAQARAQVLRSSPPDRSGGGGVTPTPRAGSASSARHGKASPAASTAS--------------------DRFKRGSGLEGTNSPVAEGVRGKTSTAAAAAFEGSVGGAPPGPPLQTRSLLVPVSSAELFPPFAASGGRRGNLDDHLVA-----SPG----SFSFARGAAE-------------------------PPQDEMDAFVTKWQDEHLRRRGFQGQRRQQDGGARPPGANERHPSSS----PAGRTVCRSPPRSLLGGSRARGGYASGGRGGGSAVPGGNAGKLGDLEESLAATSRMVNPPSLPRPPPSISHAGESADAGDGRQAQRRL-GGXXXXXXXXXANVSEQSLTSDSILFYLSGQQREAMAEATATPSSPMPAAGRFSAANGAVLKSRSSGISASQLGLPRESSEVDG 740
            NRA  TP S GRE+ P  S     GG S  +P       WPS AWSTP                       G  GS + +G ++AARRRLVEDVY    MGAALGGTGYRRAST ++G RS GA    S T P  +G     ++ +    +GAA  + GG S+LRTGAGVQ+LRESEH ++KLQ+RAAALEQQRALEAQIAAKARA+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GLY  XXXXXXXXXXXXX     P D+ E     RAP +GG+TS  +DS      AG +P +G  G G GD+RQ +++H+Q  A D A P  R G  ++  SG   +   RRS +PDVDDLPAGA ARAQVLRSSPP+R+  G   P+P +    SAR                                D F  G+G  G      E   G+  T  A AF G       G PL+ RS LVP+SS  LFPPF       G+ D  +V      SPG    SF+  RGA                           PPQDEMDAFVT +         F  +  Q  GG +  G ++  PSSS    P GR VC SP R  L    +R     GGRG  +AVPGGNA   G+LEESLAATSRMVNPPSLPRPP      GE      G +++R+   G          +++EQSLTSDSILFYLSGQQ+E+MA   + P     A G   A +G  L+SR SGI+ ++LG  +ESS+VDG
Sbjct:  463 NRALFTPRSDGRENRPVHSV----GGPSAGSPLRDG---WPSDAWSTPXXXXXXXXXXXXXXXXXXXXXXRGGPGSGS-DGQLSAARRRLVEDVYXXXXMGAALGGTGYRRASTVNYGARSGGA-RPQSATGPGVMGGELLVDARAAGGVEGAAVTAGGGPSFLRTGAGVQSLRESEHGDSKLQRRAAALEQQRALEAQIAAKARARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGLYRQXXXXXXXXXXXXXXXXXXPKDDGEDAAYSRAPVHGGNTSVANDSSSVGVAAGHFPPSGGGGRGDGDIRQGELQHRQ--AIDGAFPSARGGGNAIGGSGGGRQARHRRSIIPDVDDLPAGAYARAQVLRSSPPNRTPAGTSMPSPSSWRPVSARSAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDFDEGTGRRGDVPAAEENFPGRRRTTPAPAFGGDRDDIARGSPLRARSTLVPLSSPTLFPPFP------GDTDADIVRGPPTDSPGLAQESFAGGRGAVHRDRVSPAAXXXXXXXXXXXXXXGVHPPQDEMDAFVTSFT--------FILEINQIRGGRKVDGNDDCLPSSSSFSSPGGRAVCLSPSRGGLPARISRVNGVVGGRGS-AAVPGGNA---GELEESLAATSRMVNPPSLPRPPTGAHDDGEGDGGRSGTRSRRQCPAGPPSGVEDDATDLNEQSLTSDSILFYLSGQQQESMA--ASPPMLAEEATGGEYAKSGRTLESRGSGIATNRLG--KESSQVDG 1221          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J8K7_9PHAE3.690e-9542.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLY9_ECTSI3.250e-8946.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 216..264
NoneNo IPR availableCOILSCoilCoilcoord: 188..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2912203..2914708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15724.1mRNA_C-linearis_contig8.15724.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2912203..2916835 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15724.1 ID=prot_C-linearis_contig8.15724.1|Name=mRNA_C-linearis_contig8.15724.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=746bp
MAEKAARMAMDERAPTGGRRQASTGGRGDSGSGSGDVYNRAPSTPASHGR
ESYPGQSALDNNGGGSPFTPADRANGRWPSAAWSTPPPGSSGSNAGEGHV
TAARRRLVEDVYGGGGMGAALGGTGYRRASTGSHGVRSVGAGSHTSDTRP
EQVGAGAGGESTSFERPDGAASQGGSSYLRTGAGVQNLRESEHAENKLQK
RAAALEQQRALEAQIAAKARAKREEEEGRKREQEEEARHQQEQQRRLEAD
AEEGRRRKQAEQQEQLEGLYRQQEAALRKKHGGGGRHPNDEEVGKNPRAP
AYGGSTSALDDSREAAAPAGYPSNGDIGVGGDLRQRQMRHQQRRAADLAP
PPDRIGLGSVSGIELETPRRRSNVPDVDDLPAGAQARAQVLRSSPPDRSG
GGGVTPTPRAGSASSARHGKASPAASTASDRFKRGSGLEGTNSPVAEGVR
GKTSTAAAAAFEGSVGGAPPGPPLQTRSLLVPVSSAELFPPFAASGGRRG
NLDDHLVASPGSFSFARGAAEPPQDEMDAFVTKWQDEHLRRRGFQGQRRQ
QDGGARPPGANERHPSSSPAGRTVCRSPPRSLLGGSRARGGYASGGRGGG
SAVPGGNAGKLGDLEESLAATSRMVNPPSLPRPPPSISHAGESADAGDGR
QAQRRLGGGGGGEGEGEANVSEQSLTSDSILFYLSGQQREAMAEATATPS
SPMPAAGRFSAANGAVLKSRSSGISASQLGLPRESSEVDGGGERGY
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