prot_C-linearis_contig8.15711.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig8.15711.1
Unique Name	prot_C-linearis_contig8.15711.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	611

Homology

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BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 4.410e-85
Identity = 223/579 (38.51%), Postives = 273/579 (47.15%), Query Frame = 0

Query:   65 STSKPRRWQPHEDKLLTAAVNQCGEANWKSIASKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMRLATAPFKNWGTLSTQMSGRTSKQCRERWCHHLNPDINKGPYTRQEDETILKVHEKLGNKWSLIAAKLPGRTENSIKIRCKALQRKIGSARGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVDQPPVSGRPAAPGLALLSSQRRPRSSSRGLMFDPLFMGPSDAPLLPAAAAPAHGGGLYDTGNRYGKFVAKPEPLEWPPSGDLK---------------------------GAEMFHIGGG-------NQH----QQRYQPLPSLGQQYSYGGRPVRSAFFGGVCGGSSNGGSGEG-MFDHR--LTPTEASYLGHP------RQPPLGHFAPDFGSPPLPQASASAARGQGPEEVYPDQRQACLIDNDDELEAEALAAVGADDIPSAGTAAGHMAALAGNIASLEEISATIRAATAGQDAGXXXXXXXQPGDDLKADVG--DRDEGAEEGNGPLRSCCSFL----ALNAQDNIVGDADSWQ 590
            ++++PRRWQP EDK LT AV + GE +WKSIA KVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALM+LATAPFKNWG LS  MSGRTSKQCRERWCHHL+P INKG YT +ED+ I++   KLGN+WS IAA+LPGRTENSIKIRCKALQRK+ S  GS                                                       + +QPP++     P   LL  Q  P   SRG+ F  L  G    PL PA A P HG  ++      G   A P P    P   L+                           G+    + GG        QH    QQ+Y P P          +P  SA    + GG          MF +   L+P    +L  P      +Q PL H           +   SA   +G ++ +  Q     +  D EL + A+AAV A +   AG       A    I   E+++          D G         G D+K   G    DE   E NGP++ CCSFL    A +A DNI+GD DSW+
Sbjct:  109 TSARPRRWQPEEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLS--GSPSSGGRSGSTSSPAGRAPKKSTGTSTTARQSRELSSSSSLSASESCSSFESGLDTMAEQPPLAPLAVPPRAPLLPEQHPPVHFSRGMHFK-LGGGGDGVPLPPAGAPPCHGNSVFS-----GPGPAAPAPGYAMPRAGLEQGWFEPKQDAAHQFLLLXXXXXXXXPLGSGSAKVEGGLCALALDRQHHLLQQQKYVPQPEQLVDVIPASQPFPSAI--NIDGGXXXXXXXXXXMFANSSDLSPAVEGFLVQPQYQHAQKQTPLMH-----------EYIPSAFPQEGEQQQH-QQEGGVGLPLDGELMSHAVAAVAAAEDRYAGGVGDGGGAY--GICLPEDLAC---------DGGGQRGNGVGQGGDIKPIGGAIGGDEVVNE-NGPIKECCSFLDLASAASADDNIIGDVDSWR 653

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BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 4.100e-82
Identity = 125/161 (77.64%), Postives = 140/161 (86.96%), Query Frame = 0

Query:   61 TGRKSTSKPRRWQPHEDKLLTAAVNQCGEANWKSIASKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMRLATAPFKNWGTLSTQMSGRTSKQCRERWCHHLNPDINKGPYTRQEDETILKVHEKLGNKWSLIAAKLPGRTENSIKIRCKALQRKIG 221
            T +K++++PRRWQP EDK LT AV + GE +WKSIA KVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALM+LATAPFKNWG LS  MSGRTSKQCRERWCHHL+P INKG YT +ED  I++   +LGN+WS IAA+LPGRTENSIKIRCKALQRK G
Sbjct:   98 TRKKASTRPRRWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQRKGG 258

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BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.970e-60
Identity = 103/160 (64.38%), Postives = 120/160 (75.00%), Query Frame = 0

Query:   69 PRRWQPHEDKLLTAAVNQCGEANWKSIASKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMRLATAPFKNWGTLSTQMSGRTSKQCRERWCHHLNPDINKGPYTRQEDETILKVHEKLGNKWSLIAAKLPGRTENSIKIRCKALQR---KIGSARG 225
            PR+W   ED+ L  AV + GE+NWK IA +VG+RNHVQCLQRWKKVL+PGLVKGQW A EDA L+ L    FKNWG L+ QM GRTSKQCRERW HHL+P + KG YT +ED TIL++  +LGNKWS IA  LPGRTEN++KIR KAL R     GS RG
Sbjct:   27 PRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDRLRQNAGSGRG 186

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BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA)

HSP 1 Score: 204 bits (519), Expect = 8.260e-55
Identity = 93/160 (58.13%), Postives = 119/160 (74.38%), Query Frame = 0

Query:   67 SKPRRWQPHEDKLLTAAVNQCGEANWKSIASKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMRLATAPFKNWGTLSTQMSGRTSKQCRERWCHHLNPDINKGPYTRQEDETILKVHEKLGNKWSLIAAKLPGRTENSIKIRCKALQRKIGSARGS 226
            S PRRW   ED+ L  AV + GE NWK+IA +V  RNH QCLQRW KVL+PGL+KG W  EEDA L  L     KNWG +++ + GRTSKQCRERWC+HL+P+INKG YTR+ED+ I+ +  KLGN+WS+IA +L GRTE+++KIR K+L R   S+RG+
Sbjct:  106 SNPRRWSKAEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRRSSRGN 265

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BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 190 bits (483), Expect = 7.680e-54
Identity = 89/155 (57.42%), Postives = 110/155 (70.97%), Query Frame = 0

Query:   64 KSTSKPRRWQPHEDKLLTAAVNQCGEANWKSIASKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMRLATAPFKNWGTLSTQMSGRTSKQCRERWCHHLNPDINKGPYTRQEDETILKVHEKLGNKWSLIAAKLPGRTENSIKIRCKALQR 218
            K  + P+RW P ED+ L  AVN+ GE NWKSIA +V  RNH QCLQRW KVL PGLVKG W  +ED  L  L     KNWG ++T++ GRTSKQCRERW +HL+P I +G Y+ +ED  IL    +LGN+WS IAA LPGRTE+++KIR K+L R
Sbjct:    4 KDKAVPKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 158

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BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot
Match: A0A024UM09_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UM09_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.360e-53
Identity = 93/160 (58.13%), Postives = 119/160 (74.38%), Query Frame = 0

Query:   67 SKPRRWQPHEDKLLTAAVNQCGEANWKSIASKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMRLATAPFKNWGTLSTQMSGRTSKQCRERWCHHLNPDINKGPYTRQEDETILKVHEKLGNKWSLIAAKLPGRTENSIKIRCKALQRKIGSARGS 226
            S PRRW   ED+ L  AV + GE NWK+IA +V  RNH QCLQRW KVL+PGL+KG W  EEDA L  L     KNWG +++ + GRTSKQCRERWC+HL+P+INKG YTR+ED+ I+ +  KLGN+WS+IA +L GRTE+++KIR K+L R   S+RG+
Sbjct:  106 SNPRRWSKVEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRRSSRGN 265

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BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot
Match: A0A8K1CJV3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJV3_PYTOL)

HSP 1 Score: 205 bits (521), Expect = 2.920e-53
Identity = 91/155 (58.71%), Postives = 116/155 (74.84%), Query Frame = 0

Query:   64 KSTSKPRRWQPHEDKLLTAAVNQCGEANWKSIASKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMRLATAPFKNWGTLSTQMSGRTSKQCRERWCHHLNPDINKGPYTRQEDETILKVHEKLGNKWSLIAAKLPGRTENSIKIRCKALQR 218
            K  S PRRW  HED+ L  AV + GE NWK+IA +V  RNH QCLQRW KVL+PGL+KG WD EEDA L  L     +NWG +++ + GRTSKQCRERWC+HL+P+INKG YT +ED  IL++  +LGN+WS+IA +L GRTE+++KIR K+L R
Sbjct:  157 KEKSNPRRWSKHEDESLRLAVERSGERNWKAIAEQVPGRNHTQCLQRWTKVLKPGLIKGHWDPEEDAKLRELVAEGKRNWGQVASLIPGRTSKQCRERWCNHLDPNINKGAYTEEEDRIILEMQARLGNRWSIIAQQLKGRTEDAVKIRWKSLMR 311

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BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot
Match: A0A1V9ZGQ2_9STRA (Myb-like DNA-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGQ2_9STRA)

HSP 1 Score: 201 bits (510), Expect = 4.440e-53
Identity = 89/152 (58.55%), Postives = 115/152 (75.66%), Query Frame = 0

Query:   67 SKPRRWQPHEDKLLTAAVNQCGEANWKSIASKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMRLATAPFKNWGTLSTQMSGRTSKQCRERWCHHLNPDINKGPYTRQEDETILKVHEKLGNKWSLIAAKLPGRTENSIKIRCKALQR 218
            S PRRW   ED+ L  AV + GE NWK+IA +V  RNH QCLQRW KVL+PGL+KG W  +EDA L  L     KNWG ++ Q++GRTSKQCRERWC+HL+P+INKG YT++ED+ I+ +  KLGN+WS+IA +L GRTE+++KIR K+L R
Sbjct:   85 SNPRRWSKAEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPDEDAKLKTLVAEGRKNWGQVAAQIAGRTSKQCRERWCNHLDPNINKGNYTKEEDDLIIDMQAKLGNRWSVIAQRLVGRTEDAVKIRWKSLMR 236

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BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot
Match: W4GZ24_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZ24_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.610e-53
Identity = 97/169 (57.40%), Postives = 121/169 (71.60%), Query Frame = 0

Query:   56 PAPAATGRKSTSKPRRWQPHEDKLLTAAVNQCGEANWKSIASKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMRLATAPFKNWGTLSTQMSGRTSKQCRERWCHHLNPDINKGPYTRQEDETILKVHEKLGNKWSLIAAKLPGRTENSIKIRCKALQRKIGSAR 224
            P  A  G KS   PRRW   ED+ L  AV + GE NWK+IA +V  RNH QCLQRW KVL+PGL+KG W  EEDA L  L     KNWG ++ Q+ GRTSKQCRERWC+HL+P+INKG YTR+ED+ I+ +  KLGN+WS+IA +L GRTE+++KIR K+L R   S+R
Sbjct:   98 PGSARGGDKSN--PRRWSKAEDESLRVAVERSGERNWKAIADQVVGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVAGQIPGRTSKQCRERWCNHLDPNINKGNYTREEDQVIVDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTRRSSR 264

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BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot
Match: K3X9M2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9M2_GLOUD)

HSP 1 Score: 204 bits (520), Expect = 5.570e-53
Identity = 91/155 (58.71%), Postives = 116/155 (74.84%), Query Frame = 0

Query:   64 KSTSKPRRWQPHEDKLLTAAVNQCGEANWKSIASKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMRLATAPFKNWGTLSTQMSGRTSKQCRERWCHHLNPDINKGPYTRQEDETILKVHEKLGNKWSLIAAKLPGRTENSIKIRCKALQR 218
            K  S PRRW  HED+ L  AV + GE NWK+IA +V  RNH QCLQRW KVL+PGL+KG W  EED+ L  L T   KNWG +++ + GRTSKQCRERWC+HL+P+INKG YT  ED+ I+++  KLGN+WS+IA +L GRTE+++KIR K+L R
Sbjct:  233 KEKSNPRRWSKHEDESLRLAVERSGERNWKAIADQVPGRNHTQCLQRWTKVLKPGLIKGHWTPEEDSKLRELVTEEKKNWGQVASLIPGRTSKQCRERWCNHLDPNINKGSYTEDEDKIIIEMQAKLGNRWSIIAQQLKGRTEDAVKIRWKSLMR 387

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot

BLAST of mRNA_C-linearis_contig8.15711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KJU6_9PHAE	4.410e-85	38.51	MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D8LM16_ECTSI	4.100e-82	77.64	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2UU49_9STRA	2.970e-60	64.38	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A418B0H6_9STRA	8.260e-55	58.13	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
H3G911_PHYRM	7.680e-54	57.42	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A024UM09_9STRA	1.360e-53	58.13	Uncharacterized protein n=2 Tax=Aphanomyces invada...	[more]
A0A8K1CJV3_PYTOL	2.920e-53	58.71	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A1V9ZGQ2_9STRA	4.440e-53	58.55	Myb-like DNA-binding protein n=1 Tax=Thraustotheca...	[more]
W4GZ24_9STRA	4.610e-53	57.40	Uncharacterized protein n=12 Tax=Aphanomyces astac...	[more]
K3X9M2_GLOUD	5.570e-53	58.71	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 171..219 e-value: 1.6E-12 score: 57.6 coord: 120..168 e-value: 4.7E-7 score: 39.4 coord: 68..117 e-value: 8.9E-12 score: 55.1
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 71..115 e-value: 5.0E-10 score: 39.4
None	No IPR available	GENE3D	1.10.10.60		coord: 70..119 e-value: 2.5E-15 score: 58.2
None	No IPR available	GENE3D	1.10.10.60		coord: 174..227 e-value: 1.7E-13 score: 52.2
None	No IPR available	GENE3D	1.10.10.60		coord: 120..172 e-value: 5.2E-17 score: 63.3
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 124..181 e-value: 1.4E-12 score: 47.7
None	No IPR available	PANTHER	PTHR45614:SF29		coord: 120..234 coord: 52..134
IPR015495	Myb-like transcription factor	PANTHER	PTHR45614	FAMILY NOT NAMED	coord: 120..234 coord: 52..134
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 116..166 score: 9.791
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 64..119 score: 17.326
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 167..220 score: 18.93
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 147..220
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 66..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig8	contig	C-linearis_contig8:2787932..2796450 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig8.15711.1	mRNA_C-linearis_contig8.15711.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig8 2785076..2796664 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig8.15711.1 ID=prot_C-linearis_contig8.15711.1|Name=mRNA_C-linearis_contig8.15711.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=611bp
MSKSKKRAVQADHDEFQQRSKRQHSGEARSHRMSSEEEYTTDDLSSEEDQ
HHHQHPAPAATGRKSTSKPRRWQPHEDKLLTAAVNQCGEANWKSIASKVG
SRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMRLATAPFKNWGTLSTQM
SGRTSKQCRERWCHHLNPDINKGPYTRQEDETILKVHEKLGNKWSLIAAK
LPGRTENSIKIRCKALQRKIGSARGSGGGGGGGTSPAKSPRPAKKSASTS
TKASPPAPSSSVASASSPPCLSSSSGAGGGMVVDQPPVSGRPAAPGLALL
SSQRRPRSSSRGLMFDPLFMGPSDAPLLPAAAAPAHGGGLYDTGNRYGKF
VAKPEPLEWPPSGDLKGAEMFHIGGGNQHQQRYQPLPSLGQQYSYGGRPV
RSAFFGGVCGGSSNGGSGEGMFDHRLTPTEASYLGHPRQPPLGHFAPDFG
SPPLPQASASAARGQGPEEVYPDQRQACLIDNDDELEAEALAAVGADDIP
SAGTAAGHMAALAGNIASLEEISATIRAATAGQDAGGGGGGGGQPGDDLK
ADVGDRDEGAEEGNGPLRSCCSFLALNAQDNIVGDADSWQEGKDDDDDDD
GGGGGALMME*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR015495	Myb-like_TF
IPR017877	Myb-like_dom
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf