prot_C-linearis_contig8.15692.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig8.15692.1
Unique Name	prot_C-linearis_contig8.15692.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	246

Homology

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BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot
Match: A0A6H5KCK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK6_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 1.500e-75
Identity = 172/252 (68.25%), Postives = 187/252 (74.21%), Query Frame = 0

Query:    1 MSAPLLSLRSNLPSTSSVGNRLRQSAASRTRRRVXXXXXXXXXXXXXXXXXXXXXXXXXXSRPTAMDSGRASTSERTMIGTRRPS--LLQSRLFASAASAASPTL-FGDTIIVTKRCAERLNELREAKAQPALKLRLSVEGGGCSGFQYKFALEDAAGXXXXXXXXXXXXXXSXXXXXXDID----HEFERDGAVLVVDATSLDFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPARD 245
            MS PLLS+R+NL S+S++G+ LR  A+ R  R +                            PT+  S R       M+  R PS  LLQSR  +SAASAA+PTL FGDTIIVTKRCAERLNELR+AKAQP LKLRLSVEGGGCSGFQYKF+LEDAAGXXXXXXXXXXXXXX XXXXXX       HEFERDGAVLVVDATSL+FVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPA D
Sbjct:    1 MSLPLLSVRANL-SSSALGSSLRHPASGRCVRNLASRRRCSSDSRCNRP-------------PTSCWSRRGRAPSAVMVS-RSPSPILLQSRQLSSAASAAAPTLLFGDTIIVTKRCAERLNELRQAKAQPDLKLRLSVEGGGCSGFQYKFSLEDAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEFERDGAVLVVDATSLEFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPALD 237

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BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot
Match: D7G8E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E7_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 3.430e-45
Identity = 97/163 (59.51%), Postives = 106/163 (65.03%), Query Frame = 0

Query:   84 PSLLQSRLFASAASAASPT-LFGDTIIVTKRCAERLNELREAKAQPALKLRLSVEGGGCSGFQYKFALEDAAGXXXXXXXXXXXXXXSXXXXXXDIDHEFERDGAVLVVDATSLDFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPARD 245
            P+LLQSR  +SAASAA+PT LFGDTIIVTKRCAE +   +  +     +      GGG  G   +  L    G                         EFERDGAVLVVDATSL+FVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPA D
Sbjct:    8 PALLQSRQLSSAASAAAPTVLFGDTIIVTKRCAE-VKRAQRGQDAAGPEAPAFGGGGGVLGVSVQVLLGRRGGGS-----------------------EFERDGAVLVVDATSLEFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPALD 146

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BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot
Match: A0A835ZPC5_9STRA (Fe-S_biosyn domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPC5_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.320e-43
Identity = 84/150 (56.00%), Postives = 101/150 (67.33%), Query Frame = 0

Query:   97 SAASPTLFGDTIIVTKRCAERLNELREAKAQPA-LKLRLSVEGGGCSGFQYKFALEDAAGXXXXXXXXXXXXXXSXXXXXXDIDHEFERDGAVLVVDATSLDFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPARD 245
            S+  P    D +IVTK CAER+N+LR+ +   A L+LRLSVEGGGCSGFQY F ++D  G                       D  FERDGA +V+D  SL FVKGATVDF++DMMR+AF+VLNNP SE+ACGCGSSFA+K FE NPARD
Sbjct:  100 SSIGPQSLDDAVIVTKSCAERINQLRKRRGGDAPLRLRLSVEGGGCSGFQYTFTMDDGTGDEEIDTP----------------DIIFERDGAQVVIDEVSLGFVKGATVDFQQDMMRAAFSVLNNPNSENACGCGSSFAVKAFEANPARD 233

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BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot
Match: A0A4D9DG01_9STRA (Fe-S_biosyn domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG01_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.060e-38
Identity = 74/140 (52.86%), Postives = 92/140 (65.71%), Query Frame = 0

Query:  106 DTIIVTKRCAERLNELREAKAQPALKLRLSVEGGGCSGFQYKFALEDAAGXXXXXXXXXXXXXXSXXXXXXDIDHEFERDGAVLVVDATSLDFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPARD 245
            + ++VT  C +R+  L+    +  LKLRLSVEGGGCSGF Y F +ED                        D D  + R+GA +VVD  SL+FV+G+TVDF EDMMRSAFAV++NP+SESACGCGSSFA+KNFEKNPA D
Sbjct:    5 EDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGP--------------------VEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAIKNFEKNPAID 124

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BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot
Match: W7UC88_9STRA (Iron-sulfur cluster assembly 2 mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UC88_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.950e-38
Identity = 79/157 (50.32%), Postives = 100/157 (63.69%), Query Frame = 0

Query:   90 RLFASAASAASPTL-FGDTIIVTKRCAERLNELREAKAQPALKLRLSVEGGGCSGFQYKFALEDAAGXXXXXXXXXXXXXXSXXXXXXDIDHEFERDGAVLVVDATSLDFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPARD 245
            R  +S A + SP +   + ++VT  C +R+  L+    +  LKLRLSVEGGGCSGF Y F +ED                        D D  + R+GA +VVD  SL+FV+G+TVDF EDMMRSAFAV++NP+SESACGCGSSFA+KNFEKNPA D
Sbjct:   57 RQLSSNAVSNSPQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGP--------------------VEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMKNFEKNPAID 193

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BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot
Match: A0A7S2RUW2_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUW2_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.860e-36
Identity = 72/140 (51.43%), Postives = 91/140 (65.00%), Query Frame = 0

Query:  106 DTIIVTKRCAERLNELREAKAQPALKLRLSVEGGGCSGFQYKFALEDAAGXXXXXXXXXXXXXXSXXXXXXDIDHEFERDGAVLVVDATSLDFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPARD 245
            + I+VTK CA R+ EL++  +   +KLRL+VEGGGCSGFQY+F ++                         + D  FERDGA +V+D  SL+FV GATVDF E+M+RS+F V+NNP SESACGCGSSFALK F  NPA D
Sbjct:   39 EDIVVTKSCARRILELQKESSSEYVKLRLTVEGGGCSGFQYQFHMDSEP-------------------VDEEEDSVFERDGASVVIDEASLEFVTGATVDFVEEMIRSSFVVVNNPNSESACGCGSSFALKAFSDNPAVD 159

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BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot
Match: A0A7S3NJQ0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJQ0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.320e-33
Identity = 72/140 (51.43%), Postives = 88/140 (62.86%), Query Frame = 0

Query:  106 DTIIVTKRCAERLNELREAKAQPALKLRLSVEGGGCSGFQYKFALEDAAGXXXXXXXXXXXXXXSXXXXXXDIDHEFERDGAVLVVDATSLDFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPARD 245
            D +IVT   A+R+  L+    + A +LRL V+GGGCSGFQY F  E A                         D  F RDG  +VVD TSL+FV+GATVD++E+M+RSAF V+NNP SESACGCGSSFALKNF+ NPA D
Sbjct:   26 DGLIVTAAAAKRIAVLKTNDGE-ASRLRLGVDGGGCSGFQYTFTTEAATAKLAED------------------DSVFSRDGHDVVVDETSLEFVRGATVDYQEEMIRSAFVVINNPNSESACGCGSSFALKNFDSNPAID 146

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BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot
Match: A0A7S2CX78_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CX78_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.040e-33
Identity = 70/140 (50.00%), Postives = 89/140 (63.57%), Query Frame = 0

Query:  108 IIVTKRCAERLNELRE--AKAQPALKLRLSVEGGGCSGFQYKFALEDAAGXXXXXXXXXXXXXXSXXXXXXDIDHEFERDGAVLVVDATSLDFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPARD 245
            +I+TK CA R+  L    A   P+  LRLSVEGGGCSGFQY F L+ +                         D  FERDG+ +V D +SL+FV+G+T+DF ++M+RS+FAV+NNP SESACGCGSSFALK+F  NPA D
Sbjct:   42 LIITKSCARRIANLNAHAADTSPSKYLRLSVEGGGCSGFQYSFELDGSE--------------------LGPEDLTFERDGSRVVTDESSLEFVRGSTIDFTQEMIRSSFAVVNNPNSESACGCGSSFALKSFSDNPALD 161

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BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot
Match: A0A7S1Z1W8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z1W8_TRICV)

HSP 1 Score: 121 bits (304), Expect = 3.890e-31
Identity = 82/144 (56.94%), Postives = 105/144 (72.92%), Query Frame = 0

Query:  106 DTIIVTKRCAERLNELREAKAQP-ALKLRLSVEGGGCSGFQYKFALEDAAGXXXXXXXXXXXXXXSXXXXXX---DIDHEFERDGAVLVVDATSLDFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPARD 245
            D ++VT  CA R+ +L   +    ++ LR+ V+ GGCSGFQYKF LE  AG  XXXXXXXXXXXX XXX      D D  F +DGA +V+D +SL+ ++G+TVDF  +M+RS+FAV+ NP SESACGCGSSFA+KNFE+NPA D
Sbjct:    9 DGVVVTASCAARILQLSSKRDDADSVYLRVYVDAGGCSGFQYKFELEGEAGESXXXXXXXXXXXXXXXXVVGIDPDEDVVFVKDGARVVIDRSSLELIRGSTVDFVREMIRSSFAVIGNPQSESACGCGSSFAVKNFEENPAVD 152

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BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot
Match: K0R8V4_THAOC (Fe-S_biosyn domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R8V4_THAOC)

HSP 1 Score: 122 bits (307), Expect = 1.490e-30
Identity = 73/156 (46.79%), Postives = 92/156 (58.97%), Query Frame = 0

Query:   93 ASAASAASPTLFGDTIIVTKRCAERLNELREAKAQP-ALKLRLSVEGGGCSGFQYKFAL--EDAAGXXXXXXXXXXXXXXSXXXXXXDIDHEFERDGAVLVVDATSLDFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPARD 245
            A+AA + +    G TI +T  CA R+ EL   +  P ++ LRL V+ GGCSGFQYKF L  ED  G                       D  F  DG  +VVD TSLD + G+T+D+ ++M+RS+FAVL NP SESACGCGSSFA+KNF  NPA D
Sbjct:   90 AAAAQSNADQTGGSTINITASCAARIKELASTRPNPDSVYLRLYVDAGGCSGFQYKFLLLSEDGDGAPGVDEDEEEDGTIDPEE-----DVVFFMDGTRVVVDQTSLDLLNGSTIDYVQEMIRSSFAVLGNPQSESACGCGSSFAIKNFGANPALD 240

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot

BLAST of mRNA_C-linearis_contig8.15692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KCK6_9PHAE	1.500e-75	68.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G8E7_ECTSI	3.430e-45	59.51	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835ZPC5_9STRA	1.320e-43	56.00	Fe-S_biosyn domain-containing protein n=1 Tax=Trib...	[more]
A0A4D9DG01_9STRA	1.060e-38	52.86	Fe-S_biosyn domain-containing protein n=1 Tax=Nann...	[more]
W7UC88_9STRA	2.950e-38	50.32	Iron-sulfur cluster assembly 2 mitochondrial-like ...	[more]
A0A7S2RUW2_9STRA	3.860e-36	51.43	Hypothetical protein n=2 Tax=Rhizochromulina marin...	[more]
A0A7S3NJQ0_9STRA	1.320e-33	51.43	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A7S2CX78_9STRA	2.040e-33	50.00	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S1Z1W8_TRICV	3.890e-31	56.94	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]
K0R8V4_THAOC	1.490e-30	46.79	Fe-S_biosyn domain-containing protein n=1 Tax=Thal...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035903	HesB-like domain superfamily	GENE3D	2.60.300.12		coord: 107..235 e-value: 2.5E-28 score: 100.2
IPR035903	HesB-like domain superfamily	SUPERFAMILY	89360	HesB-like domain	coord: 107..219
IPR000361	FeS cluster biogenesis	PFAM	PF01521	Fe-S_biosyn	coord: 108..230 e-value: 1.1E-8 score: 35.3
IPR016092	FeS cluster insertion protein	TIGRFAM	TIGR00049	TIGR00049	coord: 108..234 e-value: 5.7E-24 score: 82.3
None	No IPR available	PANTHER	PTHR43011	FAMILY NOT NAMED	coord: 30..236
None	No IPR available	PANTHER	PTHR43011:SF1	IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIAL	coord: 30..236

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig8	contig	C-linearis_contig8:2624249..2627069 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig8.15692.1	mRNA_C-linearis_contig8.15692.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig8 2624249..2627831 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig8.15692.1 ID=prot_C-linearis_contig8.15692.1|Name=mRNA_C-linearis_contig8.15692.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=246bp
MSAPLLSLRSNLPSTSSVGNRLRQSAASRTRRRVCVSAAASTNSNSSSSS
SSSSSSSSSSSRPTAMDSGRASTSERTMIGTRRPSLLQSRLFASAASAAS
PTLFGDTIIVTKRCAERLNELREAKAQPALKLRLSVEGGGCSGFQYKFAL
EDAAGGGGAAKEDDDDEEDSDDEDEDDIDHEFERDGAVLVVDATSLDFVK
GATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPARD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035903	HesB-like_dom_sf
IPR000361	FeS_biogenesis
IPR016092	FeS_cluster_insertion