prot_C-linearis_contig8.15649.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15649.1
Unique Nameprot_C-linearis_contig8.15649.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length171
Homology
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BLAST of mRNA_C-linearis_contig8.15649.1 vs. uniprot
Match: D8LI90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI90_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 4.980e-65
Identity = 109/173 (63.01%), Postives = 133/173 (76.88%), Query Frame = 0 
Query:    1 GETCDVGDGVDLLIRSGEVSANIEGVGAWLYFTGRVVNMTSEETSLSVRFTYKGQQIILVSLASGATLETLNMTVIAADPYAPSCEVTERPPSSSPEGSSVLVSFKANDFYGNSISESWGNDTFQAWSYTS-VG-NMTPATVHDDGNGSYRVVSEALEFGGTAFFFVERNGFG 171
            GE CD+GDG+DL +RS E SANIE VGAW+YF GR +N++ EET LS+RF Y G+  I V LASGA L ++N+TV+AA PYAP+CEVT RPPSS+PEGSSV+ S  A DFYGNSI+E WG++ FQAW+Y   VG N++ ATVHD GNGSYRVVS+ L    T F FVER+  G
Sbjct:  106 GELCDLGDGIDLQVRSDEFSANIEDVGAWIYFDGRSLNVSHEETRLSLRFAYTGEHFINVYLASGARLASMNITVVAAAPYAPACEVTGRPPSSAPEGSSVVASLTARDFYGNSITEQWGDNAFQAWTYAGGVGDNVSAATVHDTGNGSYRVVSDTLGDAATTFLFVERDALG 278
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LI90_ECTSI4.980e-6563.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2211208..2212359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15649.1mRNA_C-linearis_contig8.15649.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2211208..2212359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15649.1 ID=prot_C-linearis_contig8.15649.1|Name=mRNA_C-linearis_contig8.15649.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=171bp
GETCDVGDGVDLLIRSGEVSANIEGVGAWLYFTGRVVNMTSEETSLSVRF
TYKGQQIILVSLASGATLETLNMTVIAADPYAPSCEVTERPPSSSPEGSS
VLVSFKANDFYGNSISESWGNDTFQAWSYTSVGNMTPATVHDDGNGSYRV
VSEALEFGGTAFFFVERNGFG
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