prot_C-linearis_contig8.15585.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15585.1
Unique Nameprot_C-linearis_contig8.15585.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length429
Homology
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BLAST of mRNA_C-linearis_contig8.15585.1 vs. uniprot
Match: D7G186_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G186_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 4.660e-49
Identity = 100/169 (59.17%), Postives = 120/169 (71.01%), Query Frame = 0 
Query:    1 MPYDHREKRAIFEIIILRGGGKYMLKKKFHFGNEFGVVSWYNEIAVYVVKDLKGGGVHMRSVNGSKVRQRFGRRRMKTLQKWWKNQVEADKKKRREEDKGTGASGGKEAMKPRFLTVLRSQALDANPAVNVKPLLDE------SAVGGXXXXXRRISGSDGQTLDLDGE 163
            M YD REK+ IFE II  GGGK+M+ K+F F N++GVV WYNEIA +VV  L+    +M S NGS+VR+RFG+RRMKTL KWWK QV+ADKK RREE K TGASGGKEA +PRFLT LR  AL+ANPAVN K +L+E      +  GG     R  S   G+ L+LDGE
Sbjct:   53 MLYDFREKKNIFETIIKLGGGKFMMNKRFSFNNQYGVVVWYNEIAKHVVTRLEKDSSYMSSRNGSQVRRRFGKRRMKTLMKWWKGQVDADKKARREESKSTGASGGKEAKRPRFLTSLRMDALNANPAVNTKQVLNEGFDLGGAFEGGGTKRTRIASSGGGKALNLDGE 221
[Close]
BLAST of mRNA_C-linearis_contig8.15585.1 vs. uniprot
Match: D7G4C3_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4C3_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 1.250e-48
Identity = 100/169 (59.17%), Postives = 120/169 (71.01%), Query Frame = 0 
Query:    1 MPYDHREKRAIFEIIILRGGGKYMLKKKFHFGNEFGVVSWYNEIAVYVVKDLKGGGVHMRSVNGSKVRQRFGRRRMKTLQKWWKNQVEADKKKRREEDKGTGASGGKEAMKPRFLTVLRSQALDANPAVNVKPLLDE------SAVGGXXXXXRRISGSDGQTLDLDGE 163
            M YD REK+ IFE II  GGGK+M+ K+F F N++GVV WYNEIA +VV  L+    +M S NGS+VR+RFG+RRMKTL KWWK QV+ADKK RREE K TGASGGKEA +PRFLT LR  AL+ANPAVN K +L+E      +  GG     R  S   G+ L+LDGE
Sbjct:   70 MLYDFREKKNIFETIIKLGGGKFMMNKRFSFNNQYGVVVWYNEIAKHVVTRLEKDSSYMSSRNGSQVRRRFGKRRMKTLMKWWKGQVDADKKARREEIKSTGASGGKEAKRPRFLTSLRMDALNANPAVNTKQVLNEGFDLGGALEGGGTKRTRIASSGGGKALNLDGE 238
[Close]
BLAST of mRNA_C-linearis_contig8.15585.1 vs. uniprot
Match: D7FXI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI4_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 1.420e-26
Identity = 72/147 (48.98%), Postives = 92/147 (62.59%), Query Frame = 0 
Query:   24 MLKKKFHFGNEFGVVSWYNEIAVYVVKDLKGGGVHMRSVNGSKVRQRFGRRRMKTLQKWWKNQVEADKKKRREEDKGTGASGGKEAMKPRFLTVLRSQALDANPAVNVKPLLDE------SAVGGXXXXXRRISGSDGQTLDLDGEG 164
            M+ K+F F N++GVV WYNEIA +VV  L+    ++ S+NGS+VR+ FG+RRMKTL KWWK QV+ADKK RREE K TGASGG +A              +ANPAVN K +L+E      +  GG     R  S   G+ L+LD EG
Sbjct:    1 MMNKRFSFNNQYGVVVWYNEIAKHVVTRLEKDSSYI-SMNGSQVRRHFGKRRMKTLMKWWKGQVDADKKARREESKSTGASGGMDAF-------------NANPAVNTKQVLNEGFDLGGAFEGGGTKRTRIASSGGGKALNLDAEG 133
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15585.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G186_ECTSI4.660e-4959.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4C3_ECTSI1.250e-4859.17Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7FXI4_ECTSI1.420e-2648.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 366..397
NoneNo IPR availableCOILSCoilCoilcoord: 169..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1584570..1586235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15585.1mRNA_C-linearis_contig8.15585.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1584558..1586235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15585.1 ID=prot_C-linearis_contig8.15585.1|Name=mRNA_C-linearis_contig8.15585.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=429bp
MPYDHREKRAIFEIIILRGGGKYMLKKKFHFGNEFGVVSWYNEIAVYVVK
DLKGGGVHMRSVNGSKVRQRFGRRRMKTLQKWWKNQVEADKKKRREEDKG
TGASGGKEAMKPRFLTVLRSQALDANPAVNVKPLLDESAVGGGGKKKRRI
SGSDGQTLDLDGEGSGGEKRKKKMTKKKEEEEKKKKKKKKKKKGNIGSGG
GGASGTGGSSSSAGATVDLTDDASGGGGEREKEKGSGKKTNGKQKARANA
AGDDGAGLGSAWPETSSEEEEGDDSDEDLSEVDDEGGGEGNPDSEEESDA
SSRDGGGRSKRRRASKKFAPLDMIRDRGWEREAREKNQQLARMADVVERS
LGSGEGAGSGSSSRAAEFILAERRLLQDEKKELREEKKEAVDAAERRWRN
AVLSLKEGTGATEDQVNKAWMEYFNLDK*
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