prot_C-linearis_contig8.15547.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15547.1
Unique Nameprot_C-linearis_contig8.15547.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length329
Homology
BLAST of mRNA_C-linearis_contig8.15547.1 vs. uniprot
Match: A0A6H5JCP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP2_9PHAE)

HSP 1 Score: 382 bits (981), Expect = 2.740e-128
Identity = 226/433 (52.19%), Postives = 252/433 (58.20%), Query Frame = 0
Query:    5 LIRALLVSCLVWPLGRCCTAA----PSPDRATARRSFLLENTNRQHDLRARLQTTHNDGGGPLRAGLLLGRALCVCGGETGDALA-GQRQKWWKGVNRKPLPAPEALSRYPSFKTPGGLVRLLDYVGTVSFAMSGAATAGMRGMNLLGCVFVGVLAATGGGTLRDLLLGQTPVFWLVEV--------------------------------------------------------------------------------------------------------EYVTICVVTALVTFVFWPILSRVSILSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRAAHPGITIVICCITCSGGGILRDVLTSSPVMVLSEHAQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACMYDLRLPQMV 328
            L++ +L+  + W   R C AA    P P   T     L  N N   D   + +   N    P +  +L G  +   GG    A   G R KW  GVNR+ +P PEALSRYP+FK+PGGLVR LDYVGTVSFAMSGAATAGMRGMNLLGC+FVGVLAATGGGT+RDLLLGQTPVFWLVEV                                                                                                        EYVTICVVTA+VTFV WP+LSRVS+LSHMGTG+DGWLSQAIDT+GLASFAVA TQ+GIRR  HPG TIVICCITCSGGGILRDVLTSSPVM LS HAQMYVST A GS AYL ARR S+DPL RIC GFFTV+ILR LAC+YDLRLP+MV
Sbjct:    4 LLKCILLLSVAW--RRPCAAAELWRPQPQPPTP----LARNHNGDSDPGGQDRIFPNSSSAPRQTVVLPGTVVHARGGGINVAFTRGSRNKWQDGVNRRAIPTPEALSRYPNFKSPGGLVRFLDYVGTVSFAMSGAATAGMRGMNLLGCIFVGVLAATGGGTVRDLLLGQTPVFWLVEVGVRGAWIVLFFCGAGDLVGRSLCPTSPCAFLRFLACLDAWVELALRRFCSVDGGVGCLPSLALLFLIGRIWRCLLMFVLRHSSVVWPVAVLLSWTPLLLPLSQVEYVTICVVTAVVTFVLWPVLSRVSVLSHMGTGLDGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAIGSGAYLLARRYSKDPLFRICVGFFTVIILRLLACLYDLRLPRMV 430          
BLAST of mRNA_C-linearis_contig8.15547.1 vs. uniprot
Match: A0A835ZGC7_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC7_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.160e-83
Identity = 136/257 (52.92%), Postives = 173/257 (67.32%), Query Frame = 0
Query:   73 LCVCGGETGDALAGQRQKWWK--GVNRKPLPAPEALSRYPSFKTPGGLVRLLDYVGTVSFAMSGAATAGMRGMNLLGCVFVGVLAATGGGTLRDLLLGQTPVFWLVEVEYVTICVVTALVTFVFWPILSRVSILSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRAAHPGITIVICCITCSGGGILRDVLTSSPVMVLSEHAQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACMYDLRLPQM 327
            LC+C    G A    ++ W K    N+  LP  E+++RYPS ++ GGL+R LDY+GTV+FA  GA  AG  GM+LLGC+ +GV+ A GGGT RDLLLGQTPVFWL EVEY+ +C+VT++ TF  WP L  + ILS  G+  DG L + +DTIGL +FAV GTQHGIRR  HP  T+VI  ITCS GG+ RDV+T +P+ V+  HA++Y +T A GS AYL AR    DPL R+ AGF   V  R  A   DLRLP +
Sbjct:   13 LCICSPSAGAATP-VKKAWLKIKNANQGDLPR-ESMTRYPSLRSAGGLLRSLDYLGTVAFATGGAICAGRAGMDLLGCIEIGVITAMGGGTTRDLLLGQTPVFWLQEVEYLAMCIVTSIATFYAWPHLRHMPILSASGSSDDGALPRWLDTIGLGAFAVVGTQHGIRRRLHPLATVVIATITCSFGGVTRDVMTKAPIRVMHSHAELYATTAAAGSCAYLIARAAVADPLLRMAAGFGVTVAARFAAWTLDLRLPTL 267          
BLAST of mRNA_C-linearis_contig8.15547.1 vs. uniprot
Match: D8LLZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ7_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 2.950e-74
Identity = 128/185 (69.19%), Postives = 133/185 (71.89%), Query Frame = 0
Query:  132 MSGAATAGMRGMNLLGCVFVGVLAATGGGTLRDLLLGQTPVFWLVEVEYVTICVVTALVTFVFWPILSRVSILSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRAAHPGITIVICCITCSGGGILRDVLTSSPVMVLSEHAQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRAL 316
            MSGAATAGMRGMNLLGC+FVGVLAATGGGT+RDLLLGQTPVFWLVE                                        AIDTIGLASFAVA TQ+GIRR  HPG TIVICCITCSGGGILRDVLTSSPVM LS HAQMYVST AFGS AYL ARR S+DPL R+CAGFFTVVILR L
Sbjct:    1 MSGAATAGMRGMNLLGCIFVGVLAATGGGTVRDLLLGQTPVFWLVE----------------------------------------AIDTIGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLARRYSKDPLFRVCAGFFTVVILRLL 145          
BLAST of mRNA_C-linearis_contig8.15547.1 vs. uniprot
Match: D8LE41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE41_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 2.910e-56
Identity = 98/231 (42.42%), Postives = 140/231 (60.61%), Query Frame = 0
Query:   95 VNRKPLPAPEALSRYPSFKTPGGLVRLLDYVGTVSFAMSGAATAGMRGMNLLGCVFVGVLAATGGGTLRDLLLGQTPVFWLVEVEYVTICVVTALVTFVFWPILSRVSILSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRAAHPGITIVICCITCSGGGILRDVLTSSPVMVLSEHAQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACMYDLRLP 325
            +NR   P  + L+RYP+F++P G++R LDY+GT  FA+SG  TAG  GM+LLGC+ VG + ATGGGT+RD+LLG TPVFW+ E EY+ +C+ T +  F  W      S L+  G   D  L   +D +G+ +F   G Q G+R+     + +    +T + GG++RDVL S P  +L  H ++Y ST   GSA Y+  +     P+ RI +GF + V LR LA   D+RLP
Sbjct:   61 INRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLW------SYLAERGVRDDMALLNWVDAMGVGAFCCIGAQAGVRKGLSNVVCVACGMLTSTFGGVIRDVLCSRPPRILFSHCEIYASTAVLGSAVYIATKAAGLPPVVRIMSGFLSAVALRVLAFTTDIRLP 285          
BLAST of mRNA_C-linearis_contig8.15547.1 vs. uniprot
Match: A0A6H5JGY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY7_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 1.280e-55
Identity = 98/231 (42.42%), Postives = 141/231 (61.04%), Query Frame = 0
Query:   95 VNRKPLPAPEALSRYPSFKTPGGLVRLLDYVGTVSFAMSGAATAGMRGMNLLGCVFVGVLAATGGGTLRDLLLGQTPVFWLVEVEYVTICVVTALVTFVFWPILSRVSILSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRAAHPGITIVICCITCSGGGILRDVLTSSPVMVLSEHAQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACMYDLRLP 325
            +NR   P  + L+RYP+F++P G++R LDY+GT  FA+SG  TAG  GM+LLGC+ VG + ATGGGT+RD+LLG TPVFW+ E EY+ +C+ T++  F  W      S L+  G   D  L   +D +G+ +F   G Q G+R+     + +    +T + GG++RDVL S P  +L  H ++Y ST   GSA Y+  +     P+ RI +GF + V LR LA   D+RLP
Sbjct:  143 INRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGHVGMDLLGCIIVGTITATGGGTVRDMLLGNTPVFWMHETEYLWMCLATSVGVFFLW------SYLAERGVRNDMALLNWVDAMGVGAFCCIGAQAGVRKGLSNVVCVACGMLTSTFGGVIRDVLCSRPPRILFSHCEIYASTAVLGSAVYIATKAAGLPPVVRIMSGFLSAVALRVLAFTTDIRLP 367          
BLAST of mRNA_C-linearis_contig8.15547.1 vs. uniprot
Match: A0A5J4Z897_PORPP (UPF0126 membrane protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z897_PORPP)

HSP 1 Score: 183 bits (465), Expect = 1.640e-51
Identity = 95/222 (42.79%), Postives = 132/222 (59.46%), Query Frame = 0
Query:  104 EALSRYPSFKTPGGLVRLLDYVGTVSFAMSGAATAGMRGMNLLGCVFVGVLAATGGGTLRDLLLGQTPVFWLVEVEYVTICVVTALVTFVFWPILSRVSILSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRAAHPGITIVICCITCSGGGILRDVLTSSPVMVLSEHAQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACMYDLRLP 325
            +++ RYP   +PGG +R  DY+GT  FA++GA TA   GM++LGC  VG + A GGGT RDLL+G  PVFWL+E EY+ I V T+L+ F FWP +S       +G   D +    ID+  L +F+  GT +GIR   +P I +V   +TC+ GG++RD     PV VL  +A++Y +T A GS AY+ AR      + RI  G  +  I+R  A  Y  RLP
Sbjct:  122 DSMPRYPDL-SPGGFLRAFDYIGTSIFALTGALTAASGGMDVLGCTVVGTITAVGGGTTRDLLMGARPVFWLIESEYIAIAVATSLLAFFFWPDVS-----DALGITEDEYFINVIDSWSLGAFSCIGTMNGIRAGYNPLIVLVCAVVTCTFGGVVRDTFLKRPVRVLHSYAEIYATTAAVGSIAYMAARAMQLPLVLRISLGLSSTFIMRLWAMKYGTRLP 337          
BLAST of mRNA_C-linearis_contig8.15547.1 vs. uniprot
Match: A0A836CDZ5_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ5_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.680e-51
Identity = 96/222 (43.24%), Postives = 125/222 (56.31%), Query Frame = 0
Query:  104 EALSRYPSFKTPGGLVRLLDYVGTVSFAMSGAATAGMRGMNLLGCVFVGVLAATGGGTLRDLLLGQTPVFWLVEVEYVTICVVTALVTFVFWPILSRVSILSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRAAHPGITIVICCITCSGGGILRDVLTSSPVMVLSEHAQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACMYDLRLP 325
            + L+RYPS  +P G++R LD  GTV FA SG  TAG  GM+LLGC  VG + A GGGT+RDLLLG TPVFW+ E EY+ IC+  A+ TF  +      S L+  G   D  L    D +G+ +F V G Q+ +RR     I +     T + GG++RDVL   P  +L  HA++Y ST   G+  Y+  RR    P+ RI  GF     LR  A    LRLP
Sbjct:   22 DGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTY------SALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLP 237          
BLAST of mRNA_C-linearis_contig8.15547.1 vs. uniprot
Match: A0A7S1TDV4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDV4_9RHOD)

HSP 1 Score: 175 bits (444), Expect = 4.620e-50
Identity = 94/224 (41.96%), Postives = 133/224 (59.38%), Query Frame = 0
Query:  104 EALSRYPSFKTPGGLVRLLDYVGTVSFAMSGAATAGMRGMNLLGCVFVGVLAATGGGTLRDLLLGQTPVFWLVEVEYVTICVVTALVTFVFWPILSRVSILSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRAAHPGITIVICCITCSGGGILRDVLTSSPVMVLSEHAQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACMYDLRLPQM 327
            + + R+P++   GGL+R LDY GT+ FA SG   A   GM+LLGC  VG + A GGGT+RDL LG  PVFW+VE EY+ +C++T+ +T   WP+L+R S  S     ++ +     D  GL++F V G Q+GIR    P I++V   +T + GG++RDVL   P  +L  HA++Y S  A G+A+Y+ A R       RI  G    +  R  A  YD+RLP M
Sbjct:    6 DGMPRFPNWSA-GGLLRGLDYGGTIVFAFSGTVQAAAHGMDLLGCSVVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALWPVLTRDSNSSSTFKKVELYS----DAAGLSAFCVIGAQNGIRLGVPPIISVVCGMMTATFGGVIRDVLCQRPARILHSHAEVYASCAAVGAASYVLAARMMMAMPARIGVGVGAALTARIAAFTYDIRLPTM 224          
BLAST of mRNA_C-linearis_contig8.15547.1 vs. uniprot
Match: A0A7S1XFC8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFC8_9RHOD)

HSP 1 Score: 175 bits (444), Expect = 5.870e-49
Identity = 94/224 (41.96%), Postives = 133/224 (59.38%), Query Frame = 0
Query:  104 EALSRYPSFKTPGGLVRLLDYVGTVSFAMSGAATAGMRGMNLLGCVFVGVLAATGGGTLRDLLLGQTPVFWLVEVEYVTICVVTALVTFVFWPILSRVSILSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRAAHPGITIVICCITCSGGGILRDVLTSSPVMVLSEHAQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACMYDLRLPQM 327
            + + R+P++   GGL+R LDY GT+ FA SG   A   GM+LLGC  VG + A GGGT+RDL LG  PVFW+VE EY+ +C++T+ +T   WP+L+R S  S     ++ +     D  GL++F V G Q+GIR    P I++V   +T + GG++RDVL   P  +L  HA++Y S  A G+A+Y+ A R       RI  G    +  R  A  YD+RLP M
Sbjct:   96 DGMPRFPNWSA-GGLLRGLDYGGTIVFAFSGTVQAAAHGMDLLGCSVVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALWPVLTRDSNSSSTFKKVELYS----DAAGLSAFCVIGAQNGIRLGVPPIISVVCGMMTATFGGVIRDVLCQRPARILHSHAEVYASCAAVGAASYVLAARMMMAMPARIGVGVGAALTARIAAFTYDIRLPTM 314          
BLAST of mRNA_C-linearis_contig8.15547.1 vs. uniprot
Match: A0A6T5MA33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MA33_HETAK)

HSP 1 Score: 173 bits (439), Expect = 3.890e-48
Identity = 100/246 (40.65%), Postives = 134/246 (54.47%), Query Frame = 0
Query:   90 KWWKGVNRKPLPAPEA---------LSRYPSFKTPGGLVRLLDYVGTVSFAMSGAATAGMRGMNLLGCVFVGVLAATGGGTLRDLLLGQTPVFWLVEVEYVTICVVTALVTFVFWPILSRVSILSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRAAHPGITIVICCITCSGGGILRDVLTSSPVMVLSEHAQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACMYDLRLPQ 326
            K +   N+ P  AP A         + R+PS    GGL+R LDY GTV FA+ G+ TAG+ GM+LLGC  VG + A GGGT+RDLLLG  PVFW++E EYV + +  A   F  W  L     L      +  W     D  G+ +F+V G Q+G+R   HP + +V   IT + GG++RDVL   P  +L   +++Y +T   G+AAY  AR  S  P  +I  GF   V  R  A  YD+RLP 
Sbjct:   81 KRFNSTNKPPAEAPPAAKPPVHTDGMPRFPSTSA-GGLLRGLDYFGTVVFALGGSVTAGLAGMDLLGCTIVGTVTAVGGGTVRDLLLGNFPVFWMLETEYVLLSLACAWAGFFGWDYLHEHWHLEENSDILRWW-----DACGVGAFSVIGAQNGLRAGLHPAVAVVCGMITATFGGMIRDVLCQKPPRILHSQSEVYATTALIGAAAYTAAR--SLPPAAKIGLGFSAAVASRYAAWTYDIRLPN 318          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCP2_9PHAE2.740e-12852.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZGC7_9STRA1.160e-8352.92UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
D8LLZ7_ECTSI2.950e-7469.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LE41_ECTSI2.910e-5642.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGY7_9PHAE1.280e-5542.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5J4Z897_PORPP1.640e-5142.79UPF0126 membrane protein n=1 Tax=Porphyridium purp... [more]
A0A836CDZ5_9STRA2.680e-5143.24UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S1TDV4_9RHOD4.620e-5041.96Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XFC8_9RHOD5.870e-4941.96Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A6T5MA33_HETAK3.890e-4840.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005115Uncharacterised domain UPF0126PFAMPF03458UPF0126coord: 121..195
e-value: 4.2E-24
score: 84.2
coord: 218..292
e-value: 7.5E-16
score: 57.8
NoneNo IPR availablePANTHERPTHR30506INNER MEMBRANE PROTEINcoord: 118..327
NoneNo IPR availablePANTHERPTHR30506:SF3UPF0126 INNER MEMBRANE PROTEIN YADScoord: 118..327
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 180..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 243..263
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 293..303
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 264..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 304..322
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 275..292
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..142
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..242
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 323..328
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 161..179
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..116
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.748
NoneNo IPR availableTMHMMTMhelixcoord: 299..318
NoneNo IPR availableTMHMMTMhelixcoord: 142..161
NoneNo IPR availableTMHMMTMhelixcoord: 274..292
NoneNo IPR availableTMHMMTMhelixcoord: 176..198
NoneNo IPR availableTMHMMTMhelixcoord: 240..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1224123..1231077 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15547.1mRNA_C-linearis_contig8.15547.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1224074..1232339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15547.1 ID=prot_C-linearis_contig8.15547.1|Name=mRNA_C-linearis_contig8.15547.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=329bp
MLVLLIRALLVSCLVWPLGRCCTAAPSPDRATARRSFLLENTNRQHDLRA
RLQTTHNDGGGPLRAGLLLGRALCVCGGETGDALAGQRQKWWKGVNRKPL
PAPEALSRYPSFKTPGGLVRLLDYVGTVSFAMSGAATAGMRGMNLLGCVF
VGVLAATGGGTLRDLLLGQTPVFWLVEVEYVTICVVTALVTFVFWPILSR
VSILSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRAAHPGITIVICC
ITCSGGGILRDVLTSSPVMVLSEHAQMYVSTTAFGSAAYLYARRRSRDPL
TRICAGFFTVVILRALACMYDLRLPQMV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005115UPF0126