prot_C-linearis_contig8.15546.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig8.15546.1
Unique Name	prot_C-linearis_contig8.15546.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	182

Homology

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BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot
Match: A0A7L0SEL4_GLABR (GCDH protein (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L0SEL4_GLABR)

HSP 1 Score: 143 bits (361), Expect = 2.400e-39
Identity = 83/172 (48.26%), Postives = 96/172 (55.81%), Query Frame = 0

Query:    2 GFILEKQQQQGMPGLSAMEIEGKLSLRASVTGTIEMDSVKVPAENVLPLAKGLKAPFACLTNARYGICWKVLGEAESCLYTARDYVLERRQFGAPLAANQDIIVXXXXXXXLTLDVPRWASLGLSFSLCFSPALAHTPLAPPCLSCIVSQLVQKKLSDMSTDIALGVQSCLR 173
            GF+LE+    GMPGLS  +IEGK SLRAS TG I MD V+VP EN+LP A GL  PF CLT+ARYGI W  LG AE+CL TAR YVL+R+QFG PLA NQ                                                  LVQKKL+DM T+IALG+Q+CLR
Sbjct:   24 GFLLER----GMPGLSTPKIEGKFSLRASATGMIVMDDVEVPEENLLPHADGLAGPFGCLTHARYGIAWGALGAAEACLETARQYVLDRKQFGGPLARNQ--------------------------------------------------LVQKKLADMVTEIALGLQACLR 141

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BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot
Match: A0A851AGN2_SULDA (GCDH protein (Fragment) n=1 Tax=Sula dactylatra TaxID=56068 RepID=A0A851AGN2_SULDA)

HSP 1 Score: 142 bits (357), Expect = 4.190e-38
Identity = 83/172 (48.26%), Postives = 95/172 (55.23%), Query Frame = 0

Query:    2 GFILEKQQQQGMPGLSAMEIEGKLSLRASVTGTIEMDSVKVPAENVLPLAKGLKAPFACLTNARYGICWKVLGEAESCLYTARDYVLERRQFGAPLAANQDIIVXXXXXXXLTLDVPRWASLGLSFSLCFSPALAHTPLAPPCLSCIVSQLVQKKLSDMSTDIALGVQSCLR 173
            GF+LE+    GMPGLS  +IEGK SLRAS TG I MD V+VP EN+LP A GL  PF CLT+ARYGI W  LG AE+CL TAR YVL+R QFG PLA NQ                                                  LVQKKL+DM T+IALG+Q+CLR
Sbjct:  110 GFLLER----GMPGLSTPKIEGKFSLRASATGMIVMDDVEVPEENLLPHAVGLAGPFGCLTHARYGIAWGALGAAEACLETARQYVLDRSQFGGPLARNQ--------------------------------------------------LVQKKLADMVTEIALGLQACLR 227

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BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot
Match: A0A7K7NY25_HALAL (GCDH protein (Fragment) n=6 Tax=Neognathae TaxID=8825 RepID=A0A7K7NY25_HALAL)

HSP 1 Score: 142 bits (357), Expect = 5.890e-38
Identity = 83/172 (48.26%), Postives = 95/172 (55.23%), Query Frame = 0

Query:    2 GFILEKQQQQGMPGLSAMEIEGKLSLRASVTGTIEMDSVKVPAENVLPLAKGLKAPFACLTNARYGICWKVLGEAESCLYTARDYVLERRQFGAPLAANQDIIVXXXXXXXLTLDVPRWASLGLSFSLCFSPALAHTPLAPPCLSCIVSQLVQKKLSDMSTDIALGVQSCLR 173
            GF+LE+    GMPGLS  +IEGK SLRAS TG I MD V+VP EN+LP A GL  PF CLT+ARYGI W  LG AE+CL TAR YVL+R QFG PLA NQ                                                  LVQKKL+DM T+IALG+Q+CLR
Sbjct:  125 GFLLER----GMPGLSTPKIEGKFSLRASATGMILMDDVEVPEENLLPHADGLAGPFGCLTHARYGIAWGALGAAEACLETARQYVLDRSQFGGPLARNQ--------------------------------------------------LVQKKLADMVTEIALGLQACLR 242

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BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot
Match: UPI001C6756F9 (glutaryl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Lagopus leucura TaxID=30410 RepID=UPI001C6756F9)

HSP 1 Score: 137 bits (346), Expect = 7.610e-38
Identity = 80/172 (46.51%), Postives = 94/172 (54.65%), Query Frame = 0

Query:    2 GFILEKQQQQGMPGLSAMEIEGKLSLRASVTGTIEMDSVKVPAENVLPLAKGLKAPFACLTNARYGICWKVLGEAESCLYTARDYVLERRQFGAPLAANQDIIVXXXXXXXLTLDVPRWASLGLSFSLCFSPALAHTPLAPPCLSCIVSQLVQKKLSDMSTDIALGVQSCLR 173
            GF+LE+    GM GLS  +IEGK SLRAS TG I MD V+VP ENVLP  KGL  PF+CLT+ARYGI W  LG AE+CL TAR Y ++R+QFG PLA NQ                                                  LVQKKL+DM T+IALG+ +CLR
Sbjct:   64 GFLLER----GMAGLSTPKIEGKFSLRASATGMIVMDDVEVPEENVLPGIKGLGGPFSCLTHARYGIAWGALGAAETCLETARQYTMDRKQFGVPLARNQ--------------------------------------------------LVQKKLADMMTEIALGLHACLR 181

[Close]

BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot
Match: A0A7L0CG02_9AVES (GCDH protein (Fragment) n=3 Tax=Accipitrinae TaxID=8955 RepID=A0A7L0CG02_9AVES)

HSP 1 Score: 142 bits (357), Expect = 9.290e-38
Identity = 83/172 (48.26%), Postives = 95/172 (55.23%), Query Frame = 0

Query:    2 GFILEKQQQQGMPGLSAMEIEGKLSLRASVTGTIEMDSVKVPAENVLPLAKGLKAPFACLTNARYGICWKVLGEAESCLYTARDYVLERRQFGAPLAANQDIIVXXXXXXXLTLDVPRWASLGLSFSLCFSPALAHTPLAPPCLSCIVSQLVQKKLSDMSTDIALGVQSCLR 173
            GF+LE+    GMPGLS  +IEGK SLRAS TG I MD V+VP EN+LP A GL  PF CLT+ARYGI W  LG AE+CL TAR YVL+R QFG PLA NQ                                                  LVQKKL+DM T+IALG+Q+CLR
Sbjct:  146 GFLLER----GMPGLSTPKIEGKFSLRASATGMILMDDVEVPEENLLPHADGLAGPFGCLTHARYGIAWGALGAAEACLETARQYVLDRSQFGGPLARNQ--------------------------------------------------LVQKKLADMVTEIALGLQACLR 263

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BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot
Match: A0A6N7F543_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F543_9PROT)

HSP 1 Score: 142 bits (359), Expect = 1.420e-37
Identity = 80/172 (46.51%), Postives = 96/172 (55.81%), Query Frame = 0

Query:    2 GFILEKQQQQGMPGLSAMEIEGKLSLRASVTGTIEMDSVKVPAENVLPLAKGLKAPFACLTNARYGICWKVLGEAESCLYTARDYVLERRQFGAPLAANQDIIVXXXXXXXLTLDVPRWASLGLSFSLCFSPALAHTPLAPPCLSCIVSQLVQKKLSDMSTDIALGVQSCLR 173
            GFIL+K    GM GLSA +I+GKLSLR S+TG + MD V VP EN+LP AKGL  PF CL NAR+GICW V+G AE C + ARDY +ER QFG P+AANQ                                                  L+QKKL+DM T+IA+G+QSCLR
Sbjct:  205 GFILDK----GMKGLSAPKIQGKLSLRTSITGEVVMDEVFVPDENLLPHAKGLGGPFGCLNNARFGICWGVMGAAEDCWHRARDYTMERTQFGRPIAANQ--------------------------------------------------LIQKKLADMQTEIAVGLQSCLR 322

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BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot
Match: A0A493T7C0_ANAPP (Glutaryl-CoA dehydrogenase n=1 Tax=Anas platyrhynchos platyrhynchos TaxID=8840 RepID=A0A493T7C0_ANAPP)

HSP 1 Score: 140 bits (353), Expect = 1.850e-37
Identity = 82/172 (47.67%), Postives = 96/172 (55.81%), Query Frame = 0

Query:    2 GFILEKQQQQGMPGLSAMEIEGKLSLRASVTGTIEMDSVKVPAENVLPLAKGLKAPFACLTNARYGICWKVLGEAESCLYTARDYVLERRQFGAPLAANQDIIVXXXXXXXLTLDVPRWASLGLSFSLCFSPALAHTPLAPPCLSCIVSQLVQKKLSDMSTDIALGVQSCLR 173
            GF+LE+    GM GLS  +I+GK SLRAS TG I MD V+VP +N+LP A GL  PF CLT+ARYGI W  LG AE+CL TAR YVL+RRQFGAPLA NQ                                                  LVQKKL+DM T+IALG+Q+CLR
Sbjct:  109 GFVLER----GMGGLSTPKIDGKFSLRASATGMILMDDVEVPEDNLLPHATGLAGPFGCLTHARYGIAWGALGAAEACLETARQYVLDRRQFGAPLARNQ--------------------------------------------------LVQKKLADMVTEIALGLQACLR 226

[Close]

BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot
Match: A0A8C3JQU6_9CHAR (Glutaryl-CoA dehydrogenase n=2 Tax=Calidris pygmaea TaxID=425635 RepID=A0A8C3JQU6_9CHAR)

HSP 1 Score: 140 bits (354), Expect = 2.230e-37
Identity = 82/172 (47.67%), Postives = 95/172 (55.23%), Query Frame = 0

Query:    2 GFILEKQQQQGMPGLSAMEIEGKLSLRASVTGTIEMDSVKVPAENVLPLAKGLKAPFACLTNARYGICWKVLGEAESCLYTARDYVLERRQFGAPLAANQDIIVXXXXXXXLTLDVPRWASLGLSFSLCFSPALAHTPLAPPCLSCIVSQLVQKKLSDMSTDIALGVQSCLR 173
            GF+LE+    G PGLS  +IEGK SLRAS TG I M+ V+VP EN+LP A+GL  PF CLT+ARYGI W  LG AESCL TAR YVL+R QFG PLA NQ                                                  LVQKKL+DM T+IALG+Q+CLR
Sbjct:  133 GFLLER----GTPGLSTPKIEGKFSLRASATGMIVMEDVEVPEENLLPNAEGLAGPFGCLTHARYGIAWGALGAAESCLETARQYVLDRNQFGGPLARNQ--------------------------------------------------LVQKKLADMVTEIALGLQACLR 250

[Close]

BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot
Match: A0A8B9ZYL0_9AVES (Glutaryl-CoA dehydrogenase n=1 Tax=Anas zonorhyncha TaxID=75864 RepID=A0A8B9ZYL0_9AVES)

HSP 1 Score: 140 bits (353), Expect = 5.780e-37
Identity = 82/172 (47.67%), Postives = 96/172 (55.81%), Query Frame = 0

Query:    2 GFILEKQQQQGMPGLSAMEIEGKLSLRASVTGTIEMDSVKVPAENVLPLAKGLKAPFACLTNARYGICWKVLGEAESCLYTARDYVLERRQFGAPLAANQDIIVXXXXXXXLTLDVPRWASLGLSFSLCFSPALAHTPLAPPCLSCIVSQLVQKKLSDMSTDIALGVQSCLR 173
            GF+LE+    GM GLS  +I+GK SLRAS TG I MD V+VP +N+LP A GL  PF CLT+ARYGI W  LG AE+CL TAR YVL+RRQFGAPLA NQ                                                  LVQKKL+DM T+IALG+Q+CLR
Sbjct:  163 GFVLER----GMGGLSTPKIDGKFSLRASATGMILMDDVEVPEDNLLPHATGLAGPFGCLTHARYGIAWGALGAAEACLETARQYVLDRRQFGAPLARNQ--------------------------------------------------LVQKKLADMVTEIALGLQACLR 280

[Close]

BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot
Match: A0A663F184_AQUCH (Glutaryl-CoA dehydrogenase n=1 Tax=Aquila chrysaetos chrysaetos TaxID=223781 RepID=A0A663F184_AQUCH)

HSP 1 Score: 142 bits (357), Expect = 5.920e-37
Identity = 83/172 (48.26%), Postives = 95/172 (55.23%), Query Frame = 0

Query:    2 GFILEKQQQQGMPGLSAMEIEGKLSLRASVTGTIEMDSVKVPAENVLPLAKGLKAPFACLTNARYGICWKVLGEAESCLYTARDYVLERRQFGAPLAANQDIIVXXXXXXXLTLDVPRWASLGLSFSLCFSPALAHTPLAPPCLSCIVSQLVQKKLSDMSTDIALGVQSCLR 173
            GF+LE+    GMPGLS  +IEGK SLRAS TG I MD V+VP EN+LP A GL  PF CLT+ARYGI W  LG AE+CL TAR YVL+R QFG PLA NQ                                                  LVQKKL+DM T+IALG+Q+CLR
Sbjct:  220 GFLLER----GMPGLSTPKIEGKFSLRASATGMILMDDVEVPEENLLPHADGLAGPFGCLTHARYGIAWGALGAAEACLETARQYVLDRSQFGGPLARNQ--------------------------------------------------LVQKKLADMVTEIALGLQACLR 337

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot

BLAST of mRNA_C-linearis_contig8.15546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7L0SEL4_GLABR	2.400e-39	48.26	GCDH protein (Fragment) n=3 Tax=Neognathae TaxID=8...	[more]
A0A851AGN2_SULDA	4.190e-38	48.26	GCDH protein (Fragment) n=1 Tax=Sula dactylatra Ta...	[more]
A0A7K7NY25_HALAL	5.890e-38	48.26	GCDH protein (Fragment) n=6 Tax=Neognathae TaxID=8...	[more]
UPI001C6756F9	7.610e-38	46.51	glutaryl-CoA dehydrogenase, mitochondrial-like n=1...	[more]
A0A7L0CG02_9AVES	9.290e-38	48.26	GCDH protein (Fragment) n=3 Tax=Accipitrinae TaxID...	[more]
A0A6N7F543_9PROT	1.420e-37	46.51	Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria...	[more]
A0A493T7C0_ANAPP	1.850e-37	47.67	Glutaryl-CoA dehydrogenase n=1 Tax=Anas platyrhync...	[more]
A0A8C3JQU6_9CHAR	2.230e-37	47.67	Glutaryl-CoA dehydrogenase n=2 Tax=Calidris pygmae...	[more]
A0A8B9ZYL0_9AVES	5.780e-37	47.67	Glutaryl-CoA dehydrogenase n=1 Tax=Anas zonorhynch...	[more]
A0A663F184_AQUCH	5.920e-37	48.26	Glutaryl-CoA dehydrogenase n=1 Tax=Aquila chrysaet...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009075	Acyl-CoA dehydrogenase/oxidase C-terminal	PFAM	PF00441	Acyl-CoA_dh_1	coord: 52..103 e-value: 1.7E-6 score: 28.3
None	No IPR available	GENE3D	2.40.110.10		coord: 1..51 e-value: 3.1E-6 score: 29.2
None	No IPR available	PANTHER	PTHR42807	FAMILY NOT NAMED	coord: 2..102
IPR036250	Acyl-CoA dehydrogenase-like, C-terminal	SUPERFAMILY	47203	Acyl-CoA dehydrogenase C-terminal domain-like	coord: 52..106
IPR009100	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	SUPERFAMILY	56645	Acyl-CoA dehydrogenase NM domain-like	coord: 4..60

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig8	contig	C-linearis_contig8:1209585..1210911 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig8.15546.1	mRNA_C-linearis_contig8.15546.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig8 1205847..1214124 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig8.15546.1 ID=prot_C-linearis_contig8.15546.1|Name=mRNA_C-linearis_contig8.15546.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=182bp
MGFILEKQQQQGMPGLSAMEIEGKLSLRASVTGTIEMDSVKVPAENVLPL
AKGLKAPFACLTNARYGICWKVLGEAESCLYTARDYVLERRQFGAPLAAN
QDIIVVVVVVVVLTLDVPRWASLGLSFSLCFSPALAHTPLAPPCLSCIVS
QLVQKKLSDMSTDIALGVQSCLRSCANFQTL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009075	AcylCo_DH/oxidase_C
IPR036250	AcylCo_DH-like_C
IPR009100	AcylCoA_DH/oxidase_NM_dom