prot_C-linearis_contig8.15528.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15528.1
Unique Nameprot_C-linearis_contig8.15528.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length254
Homology
BLAST of mRNA_C-linearis_contig8.15528.1 vs. uniprot
Match: A0A6H5LDD9_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDD9_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 3.470e-43
Identity = 88/147 (59.86%), Postives = 106/147 (72.11%), Query Frame = 0
Query:   81 IIKQVLVFEQHLPSYFNHKKFMSFVRQLNFYCFKKTKASAWACLRSADNHEDTACGDGAAAKKELESESWEAFRHPLFRRGRRDLLAGIKRQKYGGRLKRKRADAQESDIVSTLVTDVEALSGDLKAVEGKLDSITSLLLNMTGGQN 227
            ++  VLVFE  LPSY+NHKKF+SFVRQLNFY FKK K  A    RS  +  D+    GA +    ES+SWE FRHP FRRGRRDLL GIKRQK GGRLKRKRAD+Q+SDI++TL  DV+ LS DL+   GKLD+I S+L+  T G +
Sbjct:    5 LLTSVLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGA--STRSRTSAADSQGEAGAGSTGARESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKRADSQKSDILTTLRADVDTLSEDLREANGKLDTIISMLMGATSGNH 149          
BLAST of mRNA_C-linearis_contig8.15528.1 vs. uniprot
Match: D7G9I4_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I4_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 1.670e-39
Identity = 75/132 (56.82%), Postives = 92/132 (69.70%), Query Frame = 0
Query:   50 NNIPMFLDRTFRMIDNVPDEVACWSTAGDSFIIKQVLVFEQHLPSYFNHKKFMSFVRQLNFYCFKKTKASAWACLRSADNHEDTACGDGAAAKKELESESWEAFRHPLFRRGRRDLLAGIKRQKYGGRLKRK 181
            N+IP+FLDRTF  I++   ++ CWS  GDSFI+K+VL FE  LPSY+NHKKF+SFVRQLNFY FKK +    +   S+            AA+ E ES SWE F+HP FRRGRRDLL GIKRQK  GR+KR+
Sbjct:   17 NHIPVFLDRTFSFIEDTSPDIVCWSEVGDSFIVKKVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVRGRGASSRASSXXX----XXXXXAAEAE-ESASWEEFKHPQFRRGRRDLLVGIKRQKDDGRMKRR 143          
BLAST of mRNA_C-linearis_contig8.15528.1 vs. uniprot
Match: D7FV29_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV29_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 2.640e-37
Identity = 82/152 (53.95%), Postives = 100/152 (65.79%), Query Frame = 0
Query:   74 STAGDSFIIKQVLVFEQHLPSYFNHKKFMSFVRQLNFYCFKKTKASAWACLRSADNHEDTACGDGAAAKKELESESWEAFRHPLFRRGRRDLLAGIKRQKYGGRLKRKRADAQESDIVSTLVTDVEALSGDLKAVEGKLDSITSLLLNMTGG 225
            +T  D F    VL FE  LPSY+NHKKF+SFVRQLNFY FKK K    + + SA +         A      ES+SW+ FRHP FRRGRRDLLAGIKRQK GGR+KRK+A+ ++   +STL TDV+ +S DL+A  GKLD I  +L  M GG
Sbjct:   17 TTTTDVFATLHVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAVAAD-----ESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQAELEKLGTLSTLTTDVDMMSVDLRAANGKLDDIMLMLSGMAGG 163          
BLAST of mRNA_C-linearis_contig8.15528.1 vs. uniprot
Match: D7G1S0_ECTSI (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S0_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 8.570e-33
Identity = 77/171 (45.03%), Postives = 103/171 (60.23%), Query Frame = 0
Query:   76 AGDSFIIKQVLVFEQHLPSYFNHKKFMSFVRQLNFYCFKKTKASAWACLRSADNHEDTACGDGAAAKKELESESWEAFRHPLFRRGRRDLLAGIKRQKYGGRLKRKRADAQESDIVSTLVTDVEALSGDLKAVEGKLDSITSLLLNMTGGQNRAIPGDAAPRSRDNVTGDE 246
            A    +  +VL FE  LPSY+NHK F+SFVRQLNFY FKK K                    G A++ E  S+SWE F HP FR+GRRDLL  IKRQK GG LKRK+ D ++SDI++TL  +V ++  DL+   GKLD + SLL  +TG +    PG+ + +   ++ GD+
Sbjct:    4 ASQRDVSSKVLAFEGLLPSYYNHKNFLSFVRQLNFYGFKKVK--------------------GGASRSES-SDSWEEFMHPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTLAVEVGSMRVDLEMANGKLDDVLSLLSGITGTKQ---PGELSVQQHQSMRGDD 150          
BLAST of mRNA_C-linearis_contig8.15528.1 vs. uniprot
Match: D7G1S2_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S2_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 3.750e-31
Identity = 68/104 (65.38%), Postives = 74/104 (71.15%), Query Frame = 0
Query:   84 QVLVFEQHLPSYFNHKKFMSFVRQLNFYCFKKTKASAWACLRSADNHEDTACGDGAAAKKELESESWEAFRHPLFRRGRRDLLAGIKRQKYGGRLKRKRADAQE 187
            QVLVFE  LPSY+NHKKF+SFVRQLNFY FKK K  A    RS  +  D+    GA +    ES+SWE FRHP FRRGRRDLL GIKRQK GGRLKRKR D  E
Sbjct:   39 QVLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGA--STRSRSSAADSQGEAGAGSTGARESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKRDDEVE 140          
BLAST of mRNA_C-linearis_contig8.15528.1 vs. uniprot
Match: F0WF07_9STRA (HSFtype DNAbinding putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WF07_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.040e-23
Identity = 67/190 (35.26%), Postives = 94/190 (49.47%), Query Frame = 0
Query:   43 SQGIGVFNNIPMFLDRTFRMIDNVPDEVACWSTAGDSFIIKQVLVFEQH-LPSYFNHKKFMSFVRQLNFYCFKKTKASAWACLRSADNHEDTACGDGAAAKKELESESWEAFRHPLFRRGRRDLLAGIKRQKYGGRLKRKRADAQESDIVSTLVTDVEALSGDLKAVEGKLDSITSLLLNMTGGQNRAIP 231
            S+G  + +N P+FL +T+ MI++ P E+ACWS    SFIIK       H LP YF H  F SFVRQLNFY F+K K      +                  K+ E ++W  F H  F RGR DLL  IKR+ Y        +   E+  V TL   V+ +   +  + G++  +TSL+  +   +NR  P
Sbjct:   16 SRGPQLGSNAPIFLQKTYNMIESCPSEIACWSATDRSFIIKNPRELAAHILPRYFKHNNFSSFVRQLNFYGFRKRKKEEIEII------------------KQDELKNWWQFYHEYFVRGRPDLLCRIKRKTYS------ESTVPENHEVETLKKTVDRMQSQVVNLMGQISDLTSLVKVLIDEKNRTPP 181          
BLAST of mRNA_C-linearis_contig8.15528.1 vs. uniprot
Match: H3GSF4_PHYRM (HSF_DOMAIN domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSF4_PHYRM)

HSP 1 Score: 102 bits (255), Expect = 2.240e-21
Identity = 53/120 (44.17%), Postives = 75/120 (62.50%), Query Frame = 0
Query:   54 MFLDRTFRMIDNVPDEVACWSTAGDSFIIKQVLVFEQH-LPSYFNHKKFMSFVRQLNFYCFKKTKASAWACLRSADNHEDTACGDGAAAKKELESESWEAFRHPLFRRGRRDLLAGIKRQ 172
            +FL++T+ +++  P EVACW+  G+SF++KQ   F +H +P+YF H+KF SFVRQLN Y F+K +AS            + A GD  A+ K+     W  FRH  F RGRRDLL  I+R+
Sbjct:   46 VFLEKTYELLERCPPEVACWTPRGESFVVKQPAAFAEHVIPTYFKHRKFSSFVRQLNLYGFRKVRASV-----------EDATGDEDASPKD-----WWEFRHDRFVRGRRDLLCEIRRR 149          
BLAST of mRNA_C-linearis_contig8.15528.1 vs. uniprot
Match: A0A7S2WDE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDE9_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.570e-21
Identity = 62/170 (36.47%), Postives = 89/170 (52.35%), Query Frame = 0
Query:   50 NNIPMFLDRTFRMIDNVPDEVACWSTAGDSFIIKQVLVFEQHLPSYFNHKKFMSFVRQLNFYCFKKTKASAWACLRSADNHEDTACGDGAAAKKELESESWEAFRHPLFRRGRRDLLAGIKRQKYGGRLKRKRADAQESDIVSTLVTDVEALSGDLKAVEGKLDSITSLL 219
            N  P+FL +T++MID+ P EVA WS AGD+FI+K +  F   LP +F HK F SFVRQLNFY F+K +                   DGA         +W  FRH  F RG+ +LL  IKR  +      + A A + ++V  L ++V  L   +  +   ++ +TSL+
Sbjct:   55 NEAPVFLQKTYQMIDSCPPEVAGWSKAGDTFIVKDMEAFANLLPRFFKHKNFRSFVRQLNFYGFRKLRT------------------DGALISDR--PSNWWEFRHEKFLRGKPELLTHIKRANHY-----ETAPADQVELVEDLKSEVFQLRERIDDMSSTIEKLTSLV 199          
BLAST of mRNA_C-linearis_contig8.15528.1 vs. uniprot
Match: A0A7S4IT22_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IT22_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.940e-21
Identity = 70/218 (32.11%), Postives = 111/218 (50.92%), Query Frame = 0
Query:   29 SMSPTPADERAGADSQGIGVFNNIPMFLDRTFRMIDNVPDEVACWSTAGDSFIIKQVLVFE-QHLPSYFNHKKFMSFVRQLNFYCFKKTKASAWACLRSADNHEDTACGDGAAAKKELESESWEAFRHPLFRRGRRDLLAGIKRQKYGGRLKRKR-------------ADAQESDIVSTLVTDVEALSGDLKAVEGKLDSITSLLLNMTGGQNRAIPG 232
            +++P    ++A   ++ +   +  PMFL +T+ M+D     VA WS  G++F++K   VFE Q +P +F H KF SFVRQLNFY F+K K            + DT   D    K E E+ ++  F H  FRRGR DLL  IKR  +GG+                  A  ++ + VS + ++V  L   +  +   +D++++L+ NM  GQ+  + G
Sbjct:   38 TVAPPLPKKKATPPTRVVSRAHECPMFLRKTYHMVDTCDPAVASWSEDGETFVVKNTDVFEKQIIPQFFKHSKFSSFVRQLNFYGFRKIK------------YHDTIRID---PKLEAETANFWRFHHESFRRGRPDLLIEIKR--HGGKESSASNGPLVKGNDVSTTAGIEKKENVSGVKSEVTVLKERIAVMSKNIDNLSNLVQNMALGQSGTVTG 238          
BLAST of mRNA_C-linearis_contig8.15528.1 vs. uniprot
Match: A0A662YCK9_9STRA (HSF_DOMAIN domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YCK9_9STRA)

HSP 1 Score: 102 bits (254), Expect = 4.010e-21
Identity = 55/152 (36.18%), Postives = 88/152 (57.89%), Query Frame = 0
Query:   25 FRGRSMSPT---PADERAGADSQGIGVFNNIPMFLDRTFRMIDNVPDEVACWSTAGDSFIIKQVLVF-EQHLPSYFNHKKFMSFVRQLNFYCFKKTKASAWACLRSADNHEDTACGDGAAAKKELESESWEAFRHPLFRRGRRDLLAGIKRQ 172
              G  +SP+   P +E A              +FL++T+ +++  P E+A W++ G+SF++KQ  VF E+ +P+YF H+KF SFVRQLN Y F+K +A++        + ++ +C   + A +    + WE FRH  F RGRRDLL  I+R+
Sbjct:   80 LEGSELSPSVSAPTEETAAGRGVKRPRREEAALFLEKTYELLERCPPELASWTSHGESFVVKQPSVFAERVIPAYFKHRKFSSFVRQLNLYGFRKVRAASVTGSDPNGDEDEGSCASASVAGESSPKDWWE-FRHERFLRGRRDLLCEIRRR 230          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LDD9_9PHAE3.470e-4359.86HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D7G9I4_ECTSI1.670e-3956.82N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
D7FV29_ECTSI2.640e-3753.95Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
D7G1S0_ECTSI8.570e-3345.03HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D7G1S2_ECTSI3.750e-3165.38Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
F0WF07_9STRA1.040e-2335.26HSFtype DNAbinding putative n=1 Tax=Albugo laibach... [more]
H3GSF4_PHYRM2.240e-2144.17HSF_DOMAIN domain-containing protein n=1 Tax=Phyto... [more]
A0A7S2WDE9_9STRA2.570e-2136.47Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4IT22_9STRA2.940e-2132.11Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A662YCK9_9STRA4.010e-2136.18HSF_DOMAIN domain-containing protein n=2 Tax=Notho... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 51..172
e-value: 9.2E-18
score: 75.0
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 55..172
e-value: 8.9E-23
score: 80.7
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 48..173
e-value: 4.0E-25
score: 90.1
NoneNo IPR availablePANTHERPTHR10015:SF306coord: 51..230
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 51..230
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 51..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1085193..1088702 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15528.1mRNA_C-linearis_contig8.15528.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1085174..1088702 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15528.1 ID=prot_C-linearis_contig8.15528.1|Name=mRNA_C-linearis_contig8.15528.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=254bp
MELTDNTNTIHHDSGRDDTPRAWYFRGRSMSPTPADERAGADSQGIGVFN
NIPMFLDRTFRMIDNVPDEVACWSTAGDSFIIKQVLVFEQHLPSYFNHKK
FMSFVRQLNFYCFKKTKASAWACLRSADNHEDTACGDGAAAKKELESESW
EAFRHPLFRRGRRDLLAGIKRQKYGGRLKRKRADAQESDIVSTLVTDVEA
LSGDLKAVEGKLDSITSLLLNMTGGQNRAIPGDAAPRSRDNVTGDEAAAA
AADA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR027725HSF_fam
IPR036390WH_DNA-bd_sf