prot_C-linearis_contig8.15507.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig8.15507.1
Unique Name	prot_C-linearis_contig8.15507.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	550

Homology

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BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot
Match: A0A6H5LDD9_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDD9_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 9.140e-60
Identity = 235/543 (43.28%), Postives = 270/543 (49.72%), Query Frame = 0

Query:   79 IIKKVLVFEGLLPSYYNHNKFRSFVRQLNFYGFKKVKGKESSRPRSTS--SGGAAGDGAEEAPTESESWEEFRHLQFRRGRRDLLVGIKRQKDSGRLKRKRVDSEKSDVLSELRKDVDALSGDLKTVNVKLDEIMSLLLGI-SGSQSQLYQGXXXXXXXRSNLFVHSCAGGX---------------------FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGQQWRXXXXXIGQREKDPYMYGAPIGNYMTPRVHMNQQXXXXXXXXXXXXXXXXXPQ---------------WQGHHLHSQQYQQLVRPEKQPVAPNQIRFQVMPP---------------SLPAAAAHVSGKT--VGHSQQQVSSFLAMSXXXXXXXXXXXXXXXXXXKQGDWGKHSSTVRPVNRTGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSWLY---------LPPTSVGNPIGMAGSGGSVVVKTTTPMRQRPADGDMSALHVLSQSAVSAAET-------TPSSSGCD 549
            ++  VLVFEGLLPSYYNH KF SFVRQLNFYGFKKVKG  S+R R+++  S G AG G+  A  ES+SWEEFRH QFRRGRRDLLVGIKRQKD GRLKRKR DS+KSD+L+ LR DVD LS DL+  N KLD I+S+L+G  SG+  Q   G        SNL +H   GG                                          XXXXXXXXXX           +G   +DPYMYGAPI NYM PR   +QQXXXXXXXXXXXXXXXXX                 WQGH L+SQ  QQ    E+ PVAPNQIR+Q+                  ++PAA  H S  T   G S+QQ+   ++                          K+SS +RP NR  GS    XXXXXXXXXXXXXX                               SW+Y            T+V    G AG GG   +            G MS L VLSQSAVSA ET       T SS GCD
Sbjct:    5 LLTSVLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGASTRSRTSAADSQGEAGAGSTGA-RESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKRADSQKSDILTTLRADVDTLSEDLREANGKLDTIISMLMGATSGNHPQQGGGPV-----HSNLLMHLQNGGNPXXXXXXXXXXXXXXXXXXXXXSSNPASFLPVTTPGTATHGXXXXXXXXXXXXXXXXVRGGNMGPVGQDPYMYGAPISNYMAPRFSTDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWQGHQLYSQPCQQPPLAEQYPVAPNQIRYQMAQQPXXXXXXXXXXXXXXTIPAAGVHTSDVTPPTGSSRQQLPPRVS--------------------------KNSSKIRPPNRGSGSGGVGXXXXXXXXXXXXXXGTAVPRDLQQEQQQL----------------SWVYPQSPMANASSASTAVNTLSGRAGGGGGAELSR----------GPMSGLQVLSQSAVSAVETDRGRHSNTQSSPGCD 489

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BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot
Match: D7G9I4_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I4_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 7.760e-46
Identity = 89/129 (68.99%), Postives = 102/129 (79.07%), Query Frame = 0

Query:   48 NNIPVFLDRTFRMVENVPDDVVCWSGAGDSFIIKKVLVFEGLLPSYYNHNKFRSFVRQLNFYGFKKVKGKESSRPRSTSSGGAAGDGAEEAPTESESWEEFRHLQFRRGRRDLLVGIKRQKDSGRLKRK 176
            N+IPVFLDRTF  +E+   D+VCWS  GDSFI+KKVL FEGLLPSYYNH KF SFVRQLNFYGFKKV+G+ +S  R++S        A EA  ES SWEEF+H QFRRGRRDLLVGIKRQKD GR+KR+
Sbjct:   17 NHIPVFLDRTFSFIEDTSPDIVCWSEVGDSFIVKKVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVRGRGASS-RASSXXXXXXXXAAEAE-ESASWEEFKHPQFRRGRRDLLVGIKRQKDDGRMKRR 143

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BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot
Match: D7FV29_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV29_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 2.060e-42
Identity = 128/323 (39.63%), Postives = 156/323 (48.30%), Query Frame = 0

Query:   76 DSFIIKKVLVFEGLLPSYYNHNKFRSFVRQLNFYGFKKVKGKESSRPRSTSSGGAAGDGAEEAPTESESWEEFRHLQFRRGRRDLLVGIKRQKDSGRLKRKRVDSEKSDVLSELRKDVDALSGDLKTVNVKLDEIMSLLLGISGSQSQLYQGXXXXXXXRSNLFVHSCAGGXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGQQWRXXXXXIGQREK---DPYMYGAPIGNYMTPRVHMNQQXXXXXXXXXXXXXXXXXPQWQGHHLHSQQYQQLVRPEKQPVAPNQIRFQVMP-----PSLP-AAAAHVSGKTVGHSQQQ 389
            D F    VL FEGLLPSYYNH KF SFVRQLNFYGFKKVKG  +SR  S SS          A  ES+SW+EFRH +FRRGRRDLL GIKRQKD GR+KRK+ + EK   LS L  DVD +S DL+  N KLD+IM +L G++G               R N+       G F                               QQ        G  ++   DP +YGAP+    TP + +  Q                   WQGH  + Q +Q     E+  VAPNQ+R+Q        PSLP A AAH S  +    ++Q
Sbjct:   21 DVFATLHVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAV--AADESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQAELEKLGTLSTLTTDVDMMSVDLRAANGKLDDIMLMLSGMAGGN---LHSSMIPPVQRGNM--GRGGDGSFGFGIGGSSSDQNSYNTAETAGAAAAAFGGDRQQVVGAGSRDGSTDQEGHDPSVYGAPLDQRHTPCLPVGHQQQG----------------WQGHGPYPQPHQPSFSTERCLVAPNQVRYQAAQSHPALPSLPLAVAAHASHVSAAEPRRQ 320

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BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot
Match: D7G1S0_ECTSI (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S0_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 2.940e-34
Identity = 82/143 (57.34%), Postives = 98/143 (68.53%), Query Frame = 0

Query:   79 IIKKVLVFEGLLPSYYNHNKFRSFVRQLNFYGFKKVKGKESSRPRSTSSGGAAGDGAEEAPTESESWEEFRHLQFRRGRRDLLVGIKRQKDSGRLKRKRVDSEKSDVLSELRKDVDALSGDLKTVNVKLDEIMSLLLGISGSQ 221
            +  KVL FEGLLPSYYNH  F SFVRQLNFYGFKKVKG  S   RS S               S+SWEEF H QFR+GRRDLLV IKRQKD G LKRK+ D  KSD+L+ L  +V ++  DL+  N KLD+++SLL GI+G++
Sbjct:    9 VSSKVLAFEGLLPSYYNHKNFLSFVRQLNFYGFKKVKGGAS---RSES---------------SDSWEEFMHPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTLAVEVGSMRVDLEMANGKLDDVLSLLSGITGTK 133

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BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot
Match: D7G1S2_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S2_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 1.000e-33
Identity = 77/100 (77.00%), Postives = 83/100 (83.00%), Query Frame = 0

Query:   82 KVLVFEGLLPSYYNHNKFRSFVRQLNFYGFKKVKGKESSRPRSTS--SGGAAGDGAEEAPTESESWEEFRHLQFRRGRRDLLVGIKRQKDSGRLKRKRVD 179
            +VLVFEGLLPSYYNH KF SFVRQLNFYGFKKVKG  S+R RS++  S G AG G+  A  ES+SWEEFRH QFRRGRRDLLVGIKRQKD GRLKRKR D
Sbjct:   39 QVLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGASTRSRSSAADSQGEAGAGSTGA-RESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKRDD 137

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BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot
Match: A0A7S2WDE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDE9_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 8.150e-19
Identity = 65/171 (38.01%), Postives = 96/171 (56.14%), Query Frame = 0

Query:   48 NNIPVFLDRTFRMVENVPDDVVCWSGAGDSFIIKKVLVFEGLLPSYYNHNKFRSFVRQLNFYGFKKVKGKESSRPRSTSSGGAAGDGAEEAPTESESWEEFRHLQFRRGRRDLLVGIKRQK-------DSGRLKRKRVDSEKSDVLSELRKDVDALSGDLKTVNVKLDEIM 211
            N  PVFL +T++M+++ P +V  WS AGD+FI+K +  F  LLP ++ H  FRSFVRQLNFYGF+K++                 DGA  +   S +W EFRH +F RG+ +LL  IKR         D   L    V+  KS+V  +LR+ +D +S  ++ +   +D +M
Sbjct:   55 NEAPVFLQKTYQMIDSCPPEVAGWSKAGDTFIVKDMEAFANLLPRFFKHKNFRSFVRQLNFYGFRKLRT----------------DGALISDRPS-NWWEFRHEKFLRGKPELLTHIKRANHYETAPADQVEL----VEDLKSEVF-QLRERIDDMSSTIEKLTSLVDTLM 203

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BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot
Match: A0A7S2ALL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALL4_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.920e-18
Identity = 51/114 (44.74%), Postives = 65/114 (57.02%), Query Frame = 0

Query:   53 FLDRTFRMVENVPDDVVCWSGAGDSFIIKKVLVFEGLLPSYYNHNKFRSFVRQLNFYGFKKVKGKESSRPRSTSSGGAAGDGAEEAPTESESWEEFRHLQFRRGRRDLLVGIKR 166
            F+ +T+ MV + P DV CWS  GDSFIIK   +F  +LP ++ H  FRSFVRQLNFYGF+K++ + + RP                 T    W EFRH  FRR   +LL  IKR
Sbjct:    4 FIAKTYTMVNSCPSDVCCWSLLGDSFIIKDQSLFADMLPHFFKHKNFRSFVRQLNFYGFRKIRAEMALRP-----------------TRPTHWSEFRHENFRRNEPELLKIIKR 100

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BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot
Match: A0A833T5E4_PHYIN (HSF-type DNA-binding n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T5E4_PHYIN)

HSP 1 Score: 92.4 bits (228), Expect = 3.230e-18
Identity = 53/117 (45.30%), Postives = 68/117 (58.12%), Query Frame = 0

Query:   51 PVFLDRTFRMVENVPDDVVCWSGAGDSFIIKKVLVF-EGLLPSYYNHNKFRSFVRQLNFYGFKKVKGKESSRPRSTSSGGAAGDGAEEAPTESESWEEFRHLQFRRGRRDLLVGIKR 166
            PVFL +T+ M+E+ P  V CWS +G SFIIK    F + +LP Y+ HN F SFVRQLNFYGF+K K  E                      ES+SW EF H +F RGR++L+  I+R
Sbjct:   25 PVFLQKTYDMIESSPSTVACWSESGTSFIIKLPREFAKTMLPRYFKHNNFSSFVRQLNFYGFRKHKKDEIV--------------ISTEEDESKSWWEFYHEKFLRGRQELMAQIRR 127

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BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot
Match: A0A7S2F3P3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3P3_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 5.670e-18
Identity = 51/114 (44.74%), Postives = 65/114 (57.02%), Query Frame = 0

Query:   53 FLDRTFRMVENVPDDVVCWSGAGDSFIIKKVLVFEGLLPSYYNHNKFRSFVRQLNFYGFKKVKGKESSRPRSTSSGGAAGDGAEEAPTESESWEEFRHLQFRRGRRDLLVGIKR 166
            F+ +T+ MV + P DV CWS  GDSFIIK   +F  +LP ++ H  FRSFVRQLNFYGF+K++ + + RP                 T    W EFRH  FRR   +LL  IKR
Sbjct:    4 FIAKTYTMVNSCPSDVCCWSLLGDSFIIKDQSLFADMLPHFFKHKNFRSFVRQLNFYGFRKIRAEMALRP-----------------TRPTHWSEFRHENFRRNEPELLKIIKR 100

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BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot
Match: A0A7S2BCY3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BCY3_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 6.970e-18
Identity = 54/121 (44.63%), Postives = 69/121 (57.02%), Query Frame = 0

Query:   48 NNIPVFLDRTFRMVENVPDDVVCWSGAGDSFIIKKVLVFEGLLPSYYNHNKFRSFVRQLNFYGFKKVKGKESSRPRSTSSGGAAGDGA--EEAPTESESWEEFRHLQFRRGRRDLLVGIKR 166
            N  PVFL +T++M++  P D+  WS  GD+FI+K +  F  LLP ++ H  FRSFVRQLNFYGF+K++                 DGA   E P     W EFRH +F RG   LLV IKR
Sbjct:   20 NEAPVFLQKTYQMIDTCPSDIAGWSEEGDTFIVKDMEEFANLLPRFFKHRNFRSFVRQLNFYGFRKLRT----------------DGALISERPAH---WWEFRHDKFLRGHSRLLVQIKR 121

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot

BLAST of mRNA_C-linearis_contig8.15507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LDD9_9PHAE	9.140e-60	43.28	HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc...	[more]
D7G9I4_ECTSI	7.760e-46	68.99	N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI...	[more]
D7FV29_ECTSI	2.060e-42	39.63	Heat Shock transcription factor n=1 Tax=Ectocarpus...	[more]
D7G1S0_ECTSI	2.940e-34	57.34	HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc...	[more]
D7G1S2_ECTSI	1.000e-33	77.00	Heat Shock transcription factor n=1 Tax=Ectocarpus...	[more]
A0A7S2WDE9_9STRA	8.150e-19	38.01	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2ALL4_9STRA	1.920e-18	44.74	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A833T5E4_PHYIN	3.230e-18	45.30	HSF-type DNA-binding n=1 Tax=Phytophthora infestan...	[more]
A0A7S2F3P3_9STRA	5.670e-18	44.74	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2BCY3_9STRA	6.970e-18	44.63	Hypothetical protein n=2 Tax=Dictyocha speculum Ta...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 312..333
None	No IPR available	PANTHER	PTHR10015:SF306		coord: 41..205
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 102..114 score: 78.24 coord: 89..101 score: 51.21
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 49..167 e-value: 1.7E-23 score: 94.1
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 53..167 e-value: 1.6E-23 score: 83.1
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 45..168 e-value: 7.6E-27 score: 95.7
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 41..205
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 48..166

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig8	contig	C-linearis_contig8:849518..859201 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig8.15507.1	mRNA_C-linearis_contig8.15507.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig8 849040..860384 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig8.15507.1 ID=prot_C-linearis_contig8.15507.1|Name=mRNA_C-linearis_contig8.15507.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=550bp
MTDNSDTDTNHQQEGGSRISPSPRNGGDGAGEADDHGAAEQDVDSFNNNI
PVFLDRTFRMVENVPDDVVCWSGAGDSFIIKKVLVFEGLLPSYYNHNKFR
SFVRQLNFYGFKKVKGKESSRPRSTSSGGAAGDGAEEAPTESESWEEFRH
LQFRRGRRDLLVGIKRQKDSGRLKRKRVDSEKSDVLSELRKDVDALSGDL
KTVNVKLDEIMSLLLGISGSQSQLYQGGGGGGATRSNLFVHSCAGGGFGF
SGGGSSGTPYMAAGAPANGGGIGGGGGFGQQWRGGGGGIGQREKDPYMYG
APIGNYMTPRVHMNQQQQQQQQQQQQQQQQQQQPQWQGHHLHSQQYQQLV
RPEKQPVAPNQIRFQVMPPSLPAAAAHVSGKTVGHSQQQVSSFLAMSPPT
PTAVASNIKNKSPGHKQGDWGKHSSTVRPVNRTGGSGSGDGSSAGEGGGS
SSASATGDPREGQQQQQQQQQQQQQQQPQRQQQQRSWLYLPPTSVGNPIG
MAGSGGSVVVKTTTPMRQRPADGDMSALHVLSQSAVSAAETTPSSSGCD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000232	HSF_DNA-bd
IPR036388	WH-like_DNA-bd_sf
IPR027725	HSF_fam
IPR036390	WH_DNA-bd_sf