prot_C-linearis_contig79.15427.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig79.15427.1
Unique Nameprot_C-linearis_contig79.15427.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length225
Homology
BLAST of mRNA_C-linearis_contig79.15427.1 vs. uniprot
Match: A0A6H5KGB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB3_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.070e-20
Identity = 52/81 (64.20%), Postives = 60/81 (74.07%), Query Frame = 0
Query:   17 ENQAKKRSGKKLGEFKAGTVVEQGADSEVLVGVAKGMKEILEDMRLYRVLSITKPLLLECQRCKDEAKAKRDKAVQQGREG 97
            E  AKKR+GKKLG F  GTV+ QG  SE LVG+AKGMKEILEDM LY++   +KP  LECQRC DEAKAKRDK+    + G
Sbjct:  281 EKTAKKRNGKKLGVFPIGTVIRQGTPSEKLVGIAKGMKEILEDMELYKLDGESKPPKLECQRCLDEAKAKRDKSKMYNKGG 361          
BLAST of mRNA_C-linearis_contig79.15427.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.570e-19
Identity = 52/81 (64.20%), Postives = 60/81 (74.07%), Query Frame = 0
Query:   17 ENQAKKRSGKKLGEFKAGTVVEQGADSEVLVGVAKGMKEILEDMRLYRVLSITKPLLLECQRCKDEAKAKRDKAVQQGREG 97
            E  AKKR GK+LG F  GTVV++G  SE L+GVAKGMKEILEDM LY++ S TK   L CQRCKDEAKAKRDK+    + G
Sbjct:  303 EAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGG 383          
BLAST of mRNA_C-linearis_contig79.15427.1 vs. uniprot
Match: A0A6H5JDB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB4_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.960e-19
Identity = 52/81 (64.20%), Postives = 60/81 (74.07%), Query Frame = 0
Query:   17 ENQAKKRSGKKLGEFKAGTVVEQGADSEVLVGVAKGMKEILEDMRLYRVLSITKPLLLECQRCKDEAKAKRDKAVQQGREG 97
            E  AKKR GK+LG F  GTVV++G  SE L+GVAKGMKEILEDM LY++ S TK   L CQRCKDEAKAKRDK+    + G
Sbjct:  510 EAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGG 590          
BLAST of mRNA_C-linearis_contig79.15427.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.190e-19
Identity = 52/81 (64.20%), Postives = 60/81 (74.07%), Query Frame = 0
Query:   17 ENQAKKRSGKKLGEFKAGTVVEQGADSEVLVGVAKGMKEILEDMRLYRVLSITKPLLLECQRCKDEAKAKRDKAVQQGREG 97
            E  AKKR GK+LG F  GTVV++G  SE L+GVAKGMKEILEDM LY++ S TK   L CQRCKDEAKAKRDK+    + G
Sbjct:  868 EAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGG 948          
BLAST of mRNA_C-linearis_contig79.15427.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 9.860e-14
Identity = 46/85 (54.12%), Postives = 56/85 (65.88%), Query Frame = 0
Query:   13 CFFVENQAKKRSGKKLGEFKAGTVVEQGADSEVLVGVAKGMKEILEDMRLYRVLSITKPLLLECQRCKDEAKAKRDKAVQQGREG 97
            CF     A+K   + +G     TVV++G  SE L+GVAKGMKEILEDM LY++ S TK   L CQRCKDEAKAKRDK+    + G
Sbjct:  421 CFRSSPFARKTEAEAVG-----TVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGG 500          
BLAST of mRNA_C-linearis_contig79.15427.1 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 3.470e-6
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   13 CFFVENQAKKRSGKKLGEFKAGTVVEQGADSEVLVGVAKGMKEILEDMRLYRVLSITKPLLLECQR 78
            CF     A+K   + +G     TVV++G  SE L+GVAKGMKEILEDM LY++ S TK   L CQR
Sbjct:  180 CFRSSPFARKTEAEAVG-----TVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQR 240          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KGB3_9PHAE1.070e-2064.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K344_9PHAE1.570e-1964.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDB4_9PHAE1.960e-1964.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7W4_9PHAE2.190e-1964.20Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2M3_9PHAE9.860e-1454.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7K1_9PHAE3.470e-651.52Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.623

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:646982..648152 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15427.1mRNA_C-linearis_contig79.15427.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig79 646500..648285 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig79.15427.1 ID=prot_C-linearis_contig79.15427.1|Name=mRNA_C-linearis_contig79.15427.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=225bp
MWILCLWSVFSSCFFVENQAKKRSGKKLGEFKAGTVVEQGADSEVLVGVA
KGMKEILEDMRLYRVLSITKPLLLECQRCKDEAKAKRDKAVQQGREGRAG
SRRWRRTTNLTAPPRTTEAQAMTEMPLPLDHQPGAGLQGAHEPRRGTVRG
CRPRVHLPGEVSPGVQCYRAFLAVHQVYRAPHVRLLRPGSASKASRYPEY
RLASTVPQVVTGVLALHPRVQRRA*
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