prot_C-linearis_contig79.15425.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig79.15425.1
Unique Nameprot_C-linearis_contig79.15425.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length117
Homology
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BLAST of mRNA_C-linearis_contig79.15425.1 vs. uniprot
Match: D7G033_ECTSI (Ribosomal protein L35 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G033_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 2.960e-73
Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0 
Query:    1 MRTSTRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQASGGVEDKEASDFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 116
            MRTS RSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQ   GVEDKEAS+FYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI
Sbjct:   44 MRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQ---GVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 156
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BLAST of mRNA_C-linearis_contig79.15425.1 vs. uniprot
Match: A0A836CIX4_9STRA (Ribosomal protein L35Ae-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX4_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.600e-58
Identity = 88/108 (81.48%), Postives = 99/108 (91.67%), Query Frame = 0 
Query:    9 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQASGGVEDKEASDFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 116
            QPVRLYVKGV+LG+KRGLRN Y+HTSLIKIQ   GVED  A++FYLGKRIAYIYKAK LKN +K+RV+WG+VCR HGTNGV+RAKFRTNLPPKAIGAPVRVMLYPS+I
Sbjct:   16 QPVRLYVKGVVLGYKRGLRNQYNHTSLIKIQ---GVEDTAATEFYLGKRIAYIYKAKALKNNSKFRVIWGRVCRAHGTNGVIRAKFRTNLPPKAIGAPVRVMLYPSRI 120
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BLAST of mRNA_C-linearis_contig79.15425.1 vs. uniprot
Match: A0A7S2SN13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN13_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.020e-54
Identity = 85/110 (77.27%), Postives = 93/110 (84.55%), Query Frame = 0 
Query:    7 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQASGGVEDKEASDFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 116
            S QPVRLYVKGV+LG+KRGLRN Y HTSLIKIQ   GV+D +  DFYLGKR+AYIYKA    NG+KYRV+WGKVCR HGT GVVR KFRTNLPPKAIG PVRVMLYPS+I
Sbjct:   13 SSQPVRLYVKGVVLGYKRGLRNQYCHTSLIKIQ---GVDDCKDVDFYLGKRVAYIYKASNKVNGSKYRVIWGKVCRAHGTTGVVRCKFRTNLPPKAIGGPVRVMLYPSRI 119
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BLAST of mRNA_C-linearis_contig79.15425.1 vs. uniprot
Match: A0A4D9CXD4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXD4_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.330e-53
Identity = 84/110 (76.36%), Postives = 94/110 (85.45%), Query Frame = 0 
Query:    7 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQASGGVEDKEASDFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 116
            S +PVRLYVKGV+LG+KRGLR   +HTSLIKI    G+++K++ DFYLGKRIAYIYKAKTLKN TKYR +WGKV R HGTNGVVRAKFR NLPPKAIG PVRVMLYPS I
Sbjct:    6 SSEPVRLYVKGVVLGYKRGLRQQTNHTSLIKID---GLDEKKSVDFYLGKRIAYIYKAKTLKNNTKYRAIWGKVTRAHGTNGVVRAKFRRNLPPKAIGGPVRVMLYPSTI 112
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BLAST of mRNA_C-linearis_contig79.15425.1 vs. uniprot
Match: A0A7S1XMC8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC8_9STRA)

HSP 1 Score: 166 bits (421), Expect = 3.410e-51
Identity = 83/109 (76.15%), Postives = 93/109 (85.32%), Query Frame = 0 
Query:    9 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQASGGVEDKEASDFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 116
            QPVRLY KGV+LG+KRGLRN  +HTSLIKIQ   GVEDK+ + FYLGKRIAYIYKA T  K G+K+RV+WGKVCR HG+NGVVRAKFR NLPP  IGAPVRVMLYPS+I
Sbjct:   16 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQ---GVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLYPSQI 121
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BLAST of mRNA_C-linearis_contig79.15425.1 vs. uniprot
Match: A0A7R9U9P7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9P7_9STRA)

HSP 1 Score: 165 bits (418), Expect = 7.590e-51
Identity = 81/113 (71.68%), Postives = 95/113 (84.07%), Query Frame = 0 
Query:    5 TRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQASGGVEDKEASDFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 116
            T   QPVRLYVKGV+LG+KRG RN Y+HTSL+KIQ   GV++K+ + FYLGKRIAYIYKA T  K G+K+RV+WGKVCR HG+NGVVR KFR NLPP +IGAPVRVMLYPS+I
Sbjct:    4 TGESQPVRLYVKGVVLGYKRGQRNQYNHTSLVKIQ---GVDEKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRCKFRKNLPPTSIGAPVRVMLYPSQI 113
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BLAST of mRNA_C-linearis_contig79.15425.1 vs. uniprot
Match: A0A7S2XUS1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS1_9STRA)

HSP 1 Score: 165 bits (418), Expect = 8.880e-51
Identity = 80/113 (70.80%), Postives = 94/113 (83.19%), Query Frame = 0 
Query:    4 STRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQASGGVEDKEASDFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 116
            +T   QPVRLYVK VM+G+K GLR  + HT+L KIQ   GV+DK+++ FYLGK+IAYIYKA TLK  +KYRVVWGKV R HG+NGVVRAKFRTNLPPKAIG P+RVMLYPSK+
Sbjct:    9 NTSDAQPVRLYVKAVMVGYKGGLRTQHCHTALAKIQ---GVDDKKSAGFYLGKKIAYIYKAHTLKKNSKYRVVWGKVTRAHGSNGVVRAKFRTNLPPKAIGGPLRVMLYPSKV 118
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BLAST of mRNA_C-linearis_contig79.15425.1 vs. uniprot
Match: A0A7S1TVH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVH1_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.450e-50
Identity = 83/109 (76.15%), Postives = 93/109 (85.32%), Query Frame = 0 
Query:    9 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQASGGVEDKEASDFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 116
            QPVRLY KGV+LG+KRGLRN  +HTSLIKIQ   GVEDK+ + FYLGKRIAYIYKA T  K G+K+RV+WGKVCR HG+NGVVRAKFR NLPP  IGAPVRVMLYPS+I
Sbjct:   62 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQ---GVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLYPSQI 167
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BLAST of mRNA_C-linearis_contig79.15425.1 vs. uniprot
Match: A0A329S8J7_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A329S8J7_9STRA)

HSP 1 Score: 163 bits (413), Expect = 7.480e-50
Identity = 79/110 (71.82%), Postives = 92/110 (83.64%), Query Frame = 0 
Query:    7 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQASGGVEDKEASDFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 116
            SGQP RLYVKGV LG+KRGLRN Y HT+L+KIQ   G+ DK+  DFYLGK+IAYIYKAK+LKNGT++RVVWGKV R HG+NGVVRAKF  NLP +AI   VRVMLYPS++
Sbjct:   24 SGQPTRLYVKGVFLGYKRGLRNQYSHTALVKIQ---GLTDKKDVDFYLGKKIAYIYKAKSLKNGTQFRVVWGKVMRAHGSNGVVRAKFAKNLPAEAISKSVRVMLYPSRV 130
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BLAST of mRNA_C-linearis_contig79.15425.1 vs. uniprot
Match: K3W6U5_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W6U5_GLOUD)

HSP 1 Score: 162 bits (411), Expect = 8.310e-50
Identity = 78/110 (70.91%), Postives = 91/110 (82.73%), Query Frame = 0 
Query:    7 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQASGGVEDKEASDFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 116
            SGQP RLYVKGV +G+KRGLRN Y HTSLIKIQ   G++DK+  DFYLGK+IAYIYK KTLKN +K+RV+WGKV R HG NG+VRAKF  NLP +AI A VRVMLYPS++
Sbjct:    5 SGQPTRLYVKGVFVGYKRGLRNQYSHTSLIKIQ---GLQDKKDVDFYLGKKIAYIYKGKTLKNNSKFRVIWGKVTRAHGNNGLVRAKFAKNLPAEAISASVRVMLYPSRV 111
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G033_ECTSI2.960e-7395.69Ribosomal protein L35 n=1 Tax=Ectocarpus siliculos... [more]
A0A836CIX4_9STRA1.600e-5881.48Ribosomal protein L35Ae-domain-containing protein ... [more]
A0A7S2SN13_9STRA2.020e-5477.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9CXD4_9STRA1.330e-5376.36Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1XMC8_9STRA3.410e-5176.15Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U9P7_9STRA7.590e-5171.68Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XUS1_9STRA8.880e-5170.80Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1TVH1_9STRA1.450e-5076.15Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A329S8J7_9STRA7.480e-5071.82Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
K3W6U5_GLOUD8.310e-5070.91Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038661Ribosomal protein L35A superfamilyGENE3D2.40.10.190coord: 1..116
e-value: 7.5E-46
score: 156.4
IPR001780Ribosomal protein L35APFAMPF01247Ribosomal_L35Aecoord: 13..110
e-value: 5.8E-40
score: 135.4
IPR001780Ribosomal protein L35APANTHERPTHR1090260S RIBOSOMAL PROTEIN L35Acoord: 5..116
IPR001780Ribosomal protein L35AHAMAPMF_00573Ribosomal_L35Aecoord: 15..110
score: 23.651
NoneNo IPR availablePANTHERPTHR10902:SF0RIBOSOMAL PROTEIN L35Acoord: 5..116
NoneNo IPR availablePRODOMPD012670coord: 15..109
e-value: 1.0E-25
score: 283.0
IPR018266Ribosomal protein L35Ae, conserved sitePROSITEPS01105RIBOSOMAL_L35AEcoord: 78..99
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 13..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:629974..633383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15425.1mRNA_C-linearis_contig79.15425.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig79 629974..634203 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig79.15425.1 ID=prot_C-linearis_contig79.15425.1|Name=mRNA_C-linearis_contig79.15425.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=117bp
MRTSTRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQASGGVEDKEAS
DFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPP
KAIGAPVRVMLYPSKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038661L35A_sf
IPR001780Ribosomal_L35A
IPR018266Ribosomal_L35Ae_CS
IPR009000Transl_B-barrel_sf