prot_C-linearis_contig79.15410.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig79.15410.1
Unique Name	prot_C-linearis_contig79.15410.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	188

Homology

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BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot
Match: A0A6H5KL96_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL96_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 2.350e-92
Identity = 148/191 (77.49%), Postives = 163/191 (85.34%), Query Frame = 0

Query:    1 MHGMKMMGCALAACLSRVNGFVPAAGG--ALRT----QSVHSSALRMVSVGQAAPDFKLKDQKGKMVSLSSFKNKKNVVVFFYPKDSTPGCTKEACTFQGDLAKYKKAGAELVGISSDEDHSDFVQENGLTMTLLSDVGGKVRKEWKVKGAVFGTIDGRVTYVLDKKGVVTSMYDNLLDGAAHSKEALKAL 185
            M GMK   CA  A + + NGFVPAA G  AL+T    Q V S+ALRMVSVGQAAPDFKL +Q GK V+LSSFKNKK VVVFFYPKDSTPGCTKEA TFQ DLAK+KKAGAE++GISSD DH++FV+EN L+MTLLSD+GGKVRK WKVKGAVFGTIDGRVTYVLDK G+VTSMYDNLLDGAAHSKEALKAL
Sbjct:    1 MFGMKTA-CAALAFVGQANGFVPAALGRSALQTSGSAQRVSSTALRMVSVGQAAPDFKLNNQNGKPVTLSSFKNKKKVVVFFYPKDSTPGCTKEAQTFQSDLAKFKKAGAEVIGISSDADHTEFVKENNLSMTLLSDIGGKVRKAWKVKGAVFGTIDGRVTYVLDKNGIVTSMYDNLLDGAAHSKEALKAL 190

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BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot
Match: D8LJF6_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF6_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 1.410e-83
Identity = 125/145 (86.21%), Postives = 135/145 (93.10%), Query Frame = 0

Query:   41 MVSVGQAAPDFKLKDQKGKMVSLSSFKNKKNVVVFFYPKDSTPGCTKEACTFQGDLAKYKKAGAELVGISSDEDHSDFVQENGLTMTLLSDVGGKVRKEWKVKGAVFGTIDGRVTYVLDKKGVVTSMYDNLLDGAAHSKEALKAL 185
            MVSVGQAAPDFKL +Q GK V+LSSFKNKK VVVFFYPKDSTPGCTKEA TFQ DLAK+KKAGAE++GISSD DH++FV+EN L+MTLLSD+GGKVRK WKVKGAVFGTIDGRVTYVLDK GVVTSMYDNLLDGAAHSKEALKAL
Sbjct:    1 MVSVGQAAPDFKLNNQNGKPVALSSFKNKKKVVVFFYPKDSTPGCTKEAQTFQSDLAKFKKAGAEVIGISSDADHTEFVKENNLSMTLLSDIGGKVRKAWKVKGAVFGTIDGRVTYVLDKNGVVTSMYDNLLDGAAHSKEALKAL 145

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BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot
Match: A0A0G4FWI1_VITBC (Thioredoxin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FWI1_VITBC)

HSP 1 Score: 192 bits (489), Expect = 2.540e-59
Identity = 92/147 (62.59%), Postives = 113/147 (76.87%), Query Frame = 0

Query:   39 LRMVSVGQAAPDFKLKDQKGKMVSLSSFKNKKNVVVFFYPKDSTPGCTKEACTFQGDLAKYKKAGAELVGISSDEDHSDFVQENGLTMTLLSDVGGKVRKEWKVKGAVFGTIDGRVTYVLDKKGVVTSMYDNLLDGAAHSKEALKAL 185
            L MV VG+ APDF LKDQ GK+V LSSFKNKK+VVVFFYP D TPGCTK+A  F   L  +KK GAE++G+SSD DHS+F+   GL MTLLSD+GG+VRK+W+V GA+FG + GRVTYV+ K G+V  +YDNLLD  +H  +A  AL
Sbjct:   48 LSMVKVGEMAPDFSLKDQSGKVVKLSSFKNKKSVVVFFYPADMTPGCTKQAQAFNTALDDFKKLGAEVIGVSSDADHSEFISAYGLKMTLLSDIGGEVRKQWQVPGAMFGALPGRVTYVIGKDGIVKKVYDNLLDSESHIPQARAAL 194

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BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot
Match: A0A7S2V5C5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5C5_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.460e-53
Identity = 88/155 (56.77%), Postives = 115/155 (74.19%), Query Frame = 0

Query:   32 QSVHSSALRMVSVGQAAPDFKLKDQKGKMVSLSSFKNKKNVVVFFYPKDSTPGCTKEACTFQGDLAKYKKAGAELVGISSDEDHSDFVQENGLTMTLLSDVGGKVRKEWKVKGAVFGTIDGRVTYVLDKKGVVTSMYDNLLDGAAHS---KEALK 183
            ++  SS L MVS GQAAP F LKDQ G  ++L+S+K KK+VV+FFYPKD TPGCTKEA  F  +L +++K GAE++GISSD DHS FV++ GL M LLSD+ G VRK++KV  ++FG +DGRVTYV+ K G+V  +YDN  +  +H    KEALK
Sbjct:   40 RTFQSSTLSMVSEGQAAPSFSLKDQSGSTITLASYKGKKDVVLFFYPKDDTPGCTKEAQAFNANLDEFQKMGAEVIGISSDADHSAFVEKYGLKMKLLSDINGAVRKQFKVPSSLFGALDGRVTYVIGKDGIVKKIYDNQFNPESHIDVVKEALK 194

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BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot
Match: A0A835Z8Y3_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y3_9STRA)

HSP 1 Score: 175 bits (444), Expect = 9.010e-53
Identity = 94/180 (52.22%), Postives = 120/180 (66.67%), Query Frame = 0

Query:   11 LAACLSRVNGFVPAAGGALRTQSVHSS---ALRMVSVGQAAPDFKLKDQKGKMVSLSSFKNKKNVVVFFYPKDSTPGCTKEACTFQGDLAKYKKAGAELVGISSDEDHSDFVQENGLTMTLLSDVGGKVRKEWKVKGAVFGTIDGRVTYVLDKKGVVTSMYDNLLDGAAHSKEALKALGV 187
            +A  LS V GFV     A    SV  S   +LRMV  G +APDF LKD  GK VSLSSFK KKNVV+FF+PK  TPGCTKEAC F  +L  + KAG E++GISSD + + F  +  L MTLL+D GG VRK + V  ++FG +DGRVTYV+ K G+V  ++DNL+D  +H   + +ALG+
Sbjct:    1 MAGILSAVQGFV-----ARSLPSVARSGAASLRMVKAGDSAPDFTLKDSAGKSVSLSSFKGKKNVVLFFFPKSDTPGCTKEACAFNAELPVFAKAGTEIIGISSDAEQAAFKAKYNLGMTLLADAGGAVRKLYNVPRSMFGALDGRVTYVIGKDGIVKKVHDNLIDAESHVSISKQALGI 175

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BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot
Match: A0A0G4GTF6_9ALVE (Thioredoxin domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GTF6_9ALVE)

HSP 1 Score: 172 bits (437), Expect = 1.370e-51
Identity = 84/150 (56.00%), Postives = 110/150 (73.33%), Query Frame = 0

Query:   37 SALRMVSVGQAAPDFKLKDQKGKMVSLSSFKNKKNVVVFFYPKDSTPGCTKEACTFQGDLAKYKKAGAELVGISSDEDHSDFVQENGLTMTLLSDVGGKVRKEWKVKGAVFGTIDGRVTYVLDKKGVVTSMYDNLLDGAAHSKEALKALG 186
            S L MV+VG  APDFKL DQ G+ VSLSSFK KK+VV+FFYPKD TPGCT E   F     ++ K  A+++G+SSDEDH++FV + G  +TLLSDVGG VR+ +KV  A+ G +DGRVTY++ K G V S+Y+N+++ A H +EA K LG
Sbjct:   33 SHLSMVNVGDVAPDFKLTDQNGQSVSLSSFKGKKDVVLFFYPKDDTPGCTAECDLFDKAADEFSKLNAKILGVSSDEDHTEFVSKYGFQLTLLSDVGGNVRQTYKVPKAMMGFLDGRVTYIIGKDGKVKSVYENMMEPAKHVEEARKVLG 182

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BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot
Match: W7TJV0_9STRA (Peroxiredoxin q n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJV0_9STRA)

HSP 1 Score: 166 bits (419), Expect = 6.470e-49
Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = 0

Query:   39 LRMVSVGQAAPDFKLKDQKGKMVSLSSFKNKKNVVVFFYPKDSTPGCTKEACTFQGDLAKYKKAGAELVGISSDEDHSDFVQENGLTMTLLSDVGGKVRKEWKVKGAVFGTIDGRVTYVLDKKGVVTSMYDNLLDGAAHSKEALKAL 185
            + M+ VG AAPDF LKDQ  K+V LS+FK KK VV+FFYPKD TPGCTKEA  F   L  +KK GAE+ GISSDEDH+ FV + GL M LLSDVGG  RK ++V  ++FG +DGRVTYV+ K   +  +YDN     +H +++L  L
Sbjct:   33 MNMLKVGDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDEDHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTL 179

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BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot
Match: PRXQ_POPJC (Peroxiredoxin Q, chloroplastic n=11 Tax=Saliceae TaxID=238069 RepID=PRXQ_POPJC)

HSP 1 Score: 160 bits (404), Expect = 3.250e-46
Identity = 85/157 (54.14%), Postives = 103/157 (65.61%), Query Frame = 0

Query:   31 TQSVHSSALRMVSVGQAAPDFKLKDQKGKMVSLSSFKNKKNVVVFFYPKDSTPGCTKEACTFQGDLAKYKKAGAELVGISSDE--DHSDFVQENGLTMTLLSDVGGKVRKEWKVKGAVFGTIDGRVTYVLDKKGVVTSMYDNLLDGAAHSKEALKAL 185
            + SV ++    V+ GQA P F LKDQ GK +SLS FK K  VVV+FYP D TPGCTK+AC F+    K+KKAGAE+VGIS D+   H  F ++  L  TLLSD G K+RKEW V   +FGT+ GR TYVLDKKGVV  +Y+N      H  E LK L
Sbjct:   55 SSSVKNTIFAKVNKGQAPPSFTLKDQDGKTLSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGDDPSSHKAFAKKYRLPFTLLSDEGNKIRKEWGVPADLFGTLPGRQTYVLDKKGVVQLIYNNQFQPEKHIDETLKLL 210

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BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot
Match: A0A5J5AY88_9ASTE (Thioredoxin-dependent peroxiredoxin n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5AY88_9ASTE)

HSP 1 Score: 160 bits (404), Expect = 3.450e-46
Identity = 87/157 (55.41%), Postives = 101/157 (64.33%), Query Frame = 0

Query:   31 TQSVHSSALRMVSVGQAAPDFKLKDQKGKMVSLSSFKNKKNVVVFFYPKDSTPGCTKEACTFQGDLAKYKKAGAELVGISSDE--DHSDFVQENGLTMTLLSDVGGKVRKEWKVKGAVFGTIDGRVTYVLDKKGVVTSMYDNLLDGAAHSKEALKAL 185
            T SV SS    V+ G   P F LKDQ G+ V+LS FK K  VVV+FYP D TPGCTK+AC F+    K+KKAGAE+VGIS D+   H  F Q+  L  TLLSD G KVRKEW V   +FGT+ GR TYVLDKKGVV  +Y+N      H  E LK L
Sbjct:   57 TSSVKSSIFAKVNKGGVPPQFTLKDQDGRNVTLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGDDPSSHKAFAQKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKKGVVQLIYNNQFQPEKHIDETLKLL 212

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BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot
Match: V4M097_EUTSA (Thioredoxin-dependent peroxiredoxin n=6 Tax=Brassicaceae TaxID=3700 RepID=V4M097_EUTSA)

HSP 1 Score: 159 bits (402), Expect = 6.910e-46
Identity = 88/173 (50.87%), Postives = 109/173 (63.01%), Query Frame = 0

Query:   15 LSRVNGFVPAAGGALRTQSVHSSALRMVSVGQAAPDFKLKDQKGKMVSLSSFKNKKNVVVFFYPKDSTPGCTKEACTFQGDLAKYKKAGAELVGISSDED--HSDFVQENGLTMTLLSDVGGKVRKEWKVKGAVFGTIDGRVTYVLDKKGVVTSMYDNLLDGAAHSKEALKAL 185
            LS  + F P     L + S+ SS    V+ GQAAPDF LKDQ GK VSL  FK K  VV++FYP D +PGCTK+AC+F+    K+KKAGAE++GIS D+   H  F  +  L  TLLSD G KVRK+W V G +FG + GR TYVLDK GVV  +Y+N      H  E L+ L
Sbjct:   46 LSHSSSFSP-----LSSSSLKSSIFAKVNKGQAAPDFTLKDQNGKPVSLKKFKGKP-VVLYFYPADDSPGCTKQACSFRDSYEKFKKAGAEVIGISGDDSASHKAFASKYKLPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLRFL 212

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot

BLAST of mRNA_C-linearis_contig79.15410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KL96_9PHAE	2.350e-92	77.49	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
D8LJF6_ECTSI	1.410e-83	86.21	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
A0A0G4FWI1_VITBC	2.540e-59	62.59	Thioredoxin domain-containing protein n=2 Tax=Vitr...	[more]
A0A7S2V5C5_9STRA	1.460e-53	56.77	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A835Z8Y3_9STRA	9.010e-53	52.22	Thioredoxin-like protein n=1 Tax=Tribonema minus T...	[more]
A0A0G4GTF6_9ALVE	1.370e-51	56.00	Thioredoxin domain-containing protein n=1 Tax=Chro...	[more]
W7TJV0_9STRA	6.470e-49	55.78	Peroxiredoxin q n=3 Tax=Monodopsidaceae TaxID=4250...	[more]
PRXQ_POPJC	3.250e-46	54.14	Peroxiredoxin Q, chloroplastic n=11 Tax=Saliceae T...	[more]
A0A5J5AY88_9ASTE	3.450e-46	55.41	Thioredoxin-dependent peroxiredoxin n=1 Tax=Nyssa ...	[more]
V4M097_EUTSA	6.910e-46	50.87	Thioredoxin-dependent peroxiredoxin n=6 Tax=Brassi...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	PFAM	PF00578	AhpC-TSA	coord: 44..166 e-value: 9.4E-32 score: 109.5
None	No IPR available	GENE3D	3.40.30.10		coord: 41..187 e-value: 4.9E-40 score: 138.8
None	No IPR available	PANTHER	PTHR42801:SF4	THIOREDOXIN-DEPENDENT PEROXIDE REDUCTASE, MITOCHONDRIAL	coord: 28..185
None	No IPR available	PANTHER	PTHR42801	FAMILY NOT NAMED	coord: 28..185
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..187
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..20 score: 0.61
IPR024706	Peroxiredoxin, AhpC-type	PIRSF	PIRSF000239	AHPC	coord: 37..185 e-value: 1.7E-18 score: 64.3
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 42..187 score: 15.871
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 41..185

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig79	contig	C-linearis_contig79:378949..382012 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig79.15410.1	mRNA_C-linearis_contig79.15410.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig79 378882..382708 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig79.15410.1 ID=prot_C-linearis_contig79.15410.1|Name=mRNA_C-linearis_contig79.15410.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=188bp
MHGMKMMGCALAACLSRVNGFVPAAGGALRTQSVHSSALRMVSVGQAAPD
FKLKDQKGKMVSLSSFKNKKNVVVFFYPKDSTPGCTKEACTFQGDLAKYK
KAGAELVGISSDEDHSDFVQENGLTMTLLSDVGGKVRKEWKVKGAVFGTI
DGRVTYVLDKKGVVTSMYDNLLDGAAHSKEALKALGV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000866	AhpC/TSA
IPR024706	Peroxiredoxin_AhpC-typ
IPR013766	Thioredoxin_domain
IPR036249	Thioredoxin-like_sf