prot_C-linearis_contig79.15393.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig79.15393.1
Unique Nameprot_C-linearis_contig79.15393.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length189
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..188
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.645

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:180710..182752 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15393.1mRNA_C-linearis_contig79.15393.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig79 176917..183762 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig79.15393.1 ID=prot_C-linearis_contig79.15393.1|Name=mRNA_C-linearis_contig79.15393.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=189bp
MVQVAPRRTAVCLGLLAALANFQTSTGLTSDLSCPTEMFVCLGDADCGPC
LETLQAGDISFDVEFNECSELYAGVCAVVEDAGCDITNSNLESFAACIAA
DEFGCPDFVSCDAVADPTATAAPTPAPVMTEAPTDMSATLATVAPSSTGD
AEDTREANEDSGVSRTVAAAATRTAMAFACGLALLLSV*
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