prot_C-linearis_contig78.15354.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig78.15354.1
Unique Nameprot_C-linearis_contig78.15354.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1788
Homology
BLAST of mRNA_C-linearis_contig78.15354.1 vs. uniprot
Match: A0A6H5KMP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMP5_9PHAE)

HSP 1 Score: 1782 bits (4615), Expect = 0.000e+0
Identity = 1139/1780 (63.99%), Postives = 1276/1780 (71.69%), Query Frame = 0
Query:   40 GGXXXXXXXRKGQDGWRKKGEYAKKEELLHQMKWPKTRRKALIAMWESDLALKPGEYSALLTAACQLGWASMASTIMGEMIASKMPVTTTTYDAGIKAACKANKDRLALLLIVDQYARREKRPWQCQSEKQGDKAAMLVEGIGQDGKAAIAAGRPAGGGXXXXGNVKKLTKSHFRANLAKVLQVTSRTGDVEGALEVLKYMSAMGISANPLVCQHLLATACKAGRGNAARVPVILRAMGDCGMRPDMSLLDALEMLFAANSPDVALDLVLDVARAGKKKXXXKDKGVGNIWRFETNASAAEAFSFVLKRADKAMRMGRHDVVDMTIQALLSDLPQSLFFGRGAGPDNPSAGAGATGGXXXXXXXXXXXXIGVPEDGGSAATAAASPAAAGPD--EG-DQVGMDMDNDDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEEQVAFSNITTGAIVTGAXXXXXXXXXXASKLSSAVSGALTGARGAGKGHQEXXXXXXXXXXXXXXVVGAP----------QNKKWSRLGMKELNRRRRSEAIYRQKQGVAVLNHILADLAASS--TSGHTAAGVLDRWRSITLGGDWAGXXXXXXXXXXXXXXXVTAEIVRYSRPTEASYMHTMSALVQSGQWGRARSLLEVMRVDGIPPTVGCYSHLLTLLHARTSNQ-PEPSAHPGDEEALSMSNMSNMASMSPVE-ATFLWSEPTYEWDEVVSLMRDARSTEAGTYEVTDDMYHTALDVLQIVSQRPTHVSLGVVGPEVAPLPPPPAKVFLERAECLLQWALDAGMEMTVEVLLPVLTLSHTARDADKVFKYFEAMLEVDTPRQGWTYSATFAEAYNMAIHACEFGGEQHAERALAYVRTMGSASGLKPRAKQYELAIKAMVAARRYRDAYQLLAEAVENGAEKVGVYDAAMKACAMEGNPAQAETLVRIMLEMGLNPGSEAMSQLLLAYGNCGDVEGIQSVMTRAGNEVFTGGVMNALVYESVLRVLAPLEAWQDAETFVKEGEMVLPGSLTYRTYGYLMVAYAVEQQWGAAIELALGTGRWPEKTSGGPEGRFHPPELRETTCAVTLKWLLTQGVGGPDSMAARGAVGGGQGGXGAGVRAEEAMAEKALEYRKCGRELFTRLLASGAPLRSMRVMKAALGGIGAEPVPSSSSSSSSYPDPSEGSEDAPIYWKQTMPFWGDPEKPPSSSSXXXXXXXXXXXXXXASSGLLPDDWLLSVLPEDDAEREVAAQALHVGTVVEVLLRLYTTCDQPGANGFHSPTAVGLLQQAVSAACLAEDPDLADRLFTAWLDRASYSQLSQARLRSALRISLSEVLAAFFAEGQGEEGVYRGLSLIGRCRDAGLPPYPFDFLGAMRACNTAGLYSTALRLFDQLTAASNPFPSSSPPEYIYPDKASSSRYPDDSDAGSSGGAAAESDSDMDPENDSNPGSDDPEMSGSLSPSSGKAVVSRAQQQKRRGRGGGRKGEVPTGESEERSAEDGAMDGGFRNGSXXXXXXXXXXXXXXRRG-----EREGAGG----GVG---MRFENLNDIPDGELIPAAAATIALESCFLGGRRDQAMEIVWQ--LIRMRHPLTEACRNRAIVALTSGGHPDMALDMARGMEKDQHYADRATVEFVERFQKRAFEAAEAYDLAQE-------GEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLXXXXXXXXXXXXXXXXXXXXSPSRLXXXX--LSPESSATEDGNG-------SSSDRPSELVLRFLPLLSEALRSKLRPGEGEDESAPQI 1772
            GG       +KGQD W KKG++AKKE+LLHQMKWPKTRRKALIAMWESD+ LK  EY ALLTA+CQLGWA+MAS IM EM+AS +PVTT TYDA IKAACKANKDRLALLLIVDQ+          Q+EKQGDK A+ +   GQ  KAA           XXX   K L+ S+FR NL+KVLQVTSRTG+VEG+L+VLKYM AMGISANP VC  LLATACKAGRG++ARVP ILRAMG+CG+RPDM LLDALEML  A SP+VALDL+++VA  G++K     KG+G  WRF+TN SAAEA+SF+LK A+KA   GR D+V  +I A+L DLPQSL++ RG+  +  SA     G              G   D  + A  A S A A  D  EG    G    +DD +    XXXXXXXXXXXXXXXXXXX         +   +        +    XXXX      ASKLSSAVSGALTGARG GKG +E          XXXX               +NK+W+RLG KELNR+RR+EAIYRQKQ V++LNHILADLA SS  TSGHTAA VLDRWRSITLGG  AG                 AE  RYSRPT+ASYM TMSALVQSGQWGRARSL+EVM+ DG+PP VGCYSHLLTLLH R +++ P+P  +   EE+LSMS      S+SPV+ A FLWSEPTYEWDEVVSL+ DARSTE   Y +T+DMYHTALDVLQ++S+RP  VSLGVVG          AKVFL+RAECLL+WALDAG EMTVE+L P+L LSHTARDA+KVFKYFEA+LE DTPRQGW Y+ATFAEAY+MAIHACEFGGE   ERALAYVRTMGSASGLKP AKQYE AIKAMV+ARR+RDAYQLLAEAVENGAE V VYD A++ACA+EGNPAQAETLVR+ML+ G +PGS AMSQLLLAYGN GDVEGIQSVM RAGNEVFTGGVMNALVYESVL+ LAPLEAWQDAE FVKEGEMVLPGSLTYRTYGYLMVAYAVE+QWGA +ELALGTGRWPE+ SGGPEGRFHPPELRETTCAV LKWLLTQGV G DS+A RG VG G G  G   +  EA+ E+ALEYRKCGRELFTRLLASGAPLRS+RV+KAALGGIGAEP  SSS       D  EGSEDA I+WKQTMPFWGDPEKPPSS+S                   L  DWLLS LPE++AERE+AAQALHV TVVEV LRLY+TC+QPGANG HSP AVGLLQQA+SAACL +DPDLADRL  AWL+RA  +QLSQARLRSALRISLSEVLAAFFAEGQGEEGVYRGLSLIG+CRDAGL PYPFDFLGAMRACNTAGLY+TALRLFDQL A ++  PS   P   Y                 +G  ++ S ++ +P+    PGSD   M GSL P+S +   S                    GE         + +   R G               R+G     EREG  G    G G   MRFENLNDIPDGEL+PAAAATIALESCFLGGRRDQAMEIVWQ  LIR RHPLTEACRNRAIVALTS GHPDMALDMARGME+D+HYADRATVEFVERF+K AF+AAE+YD A +         XXXXXXXXXXXXXXXXXXXXXXXXXXX   E+            XXXXXXXXX    +      LS  SS T             SSDRP ELVLRFLPLLSEALRSKLRPGE + E  PQ+
Sbjct:  136 GGRGGRGRGKKGQDRWTKKGDFAKKEDLLHQMKWPKTRRKALIAMWESDMVLKREEYFALLTASCQLGWAAMASMIMEEMLASGVPVTTATYDAAIKAACKANKDRLALLLIVDQW----------QAEKQGDKEALPLADGGQGAKAATXXXXXX----XXXXXXKVLSNSYFRTNLSKVLQVTSRTGNVEGSLDVLKYMGAMGISANPGVCHLLLATACKAGRGHSARVPGILRAMGECGLRPDMGLLDALEMLLDAGSPEVALDLLVEVANIGREK-----KGIGKFWRFDTNVSAAEAYSFILKWAEKA---GRPDIVGSSIHAILRDLPQSLYYNRGSEVEKVSAATATAG---------PVPATGGKGDADTPAAGAFSCATAASDVVEGLPPTGFGAGDDDHDPLTNXXXXXXXXXXXXXXXXXXXALDLDADSVKR--SSXXXXXXXVXXXXXXXXVLGSGSASKLSSAVSGALTGARG-GKGTEEGRDGEEGPGGXXXXXXXXXXXXXXXKKKGKNKQWTRLGQKELNRQRRNEAIYRQKQSVSILNHILADLADSSSFTSGHTAAEVLDRWRSITLGGAGAGGEAGG-----------VAETARYSRPTQASYMFTMSALVQSGQWGRARSLVEVMKADGMPPKVGCYSHLLTLLHTRLASRLPDPDKNVHVEESLSMS------SLSPVDQAAFLWSEPTYEWDEVVSLLGDARSTERAKYAITEDMYHTALDVLQMISERPVDVSLGVVGGAATXXXXXXAKVFLDRAECLLEWALDAGTEMTVEILFPLLKLSHTARDAEKVFKYFEALLETDTPRQGWAYAATFAEAYDMAIHACEFGGES--ERALAYVRTMGSASGLKPAAKQYEAAIKAMVSARRFRDAYQLLAEAVENGAETVSVYDEALRACALEGNPAQAETLVRVMLDTGCDPGSNAMSQLLLAYGNAGDVEGIQSVMARAGNEVFTGGVMNALVYESVLKTLAPLEAWQDAEMFVKEGEMVLPGSLTYRTYGYLMVAYAVEKQWGAVVELALGTGRWPERISGGPEGRFHPPELRETTCAVALKWLLTQGVRGCDSVA-RGGVGVGSGEVG--EQQAEAV-ERALEYRKCGRELFTRLLASGAPLRSVRVIKAALGGIGAEPGQSSS-------DSPEGSEDATIFWKQTMPFWGDPEKPPSSTSTSTPAKDWKP---------LSSDWLLSSLPEEEAEREIAAQALHVCTVVEVFLRLYSTCEQPGANGLHSPMAVGLLQQAISAACLVDDPDLADRLLMAWLERAHVTQLSQARLRSALRISLSEVLAAFFAEGQGEEGVYRGLSLIGQCRDAGLLPYPFDFLGAMRACNTAGLYATALRLFDQLMAPASGDPS---PAMEYXXXXXXXXXXXXXXXXXNGADSSLSAAESEPD----PGSD-AVMGGSL-PASPEQSAS--------------------GEQXXXXXXXXSANNSGRQGKPQPEGTPTDDGSSNRKGCEGDDEREGQAGTGETGEGSNTMRFENLNDIPDGELLPAAAATIALESCFLGGRRDQAMEIVWQASLIRRRHPLTEACRNRAIVALTSAGHPDMALDMARGMEQDRHYADRATVEFVERFEKWAFDAAESYDQAHKETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGNEEGREIAAVGESDAXXXXXXXXXXXXEMVSSQPSLSASSSFTARDRXXXXXXXVGSSDRPEELVLRFLPLLSEALRSKLRPGE-DGEKTPQV 1812          
BLAST of mRNA_C-linearis_contig78.15354.1 vs. uniprot
Match: D7G8W2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W2_ECTSI)

HSP 1 Score: 1664 bits (4309), Expect = 0.000e+0
Identity = 1111/1835 (60.54%), Postives = 1234/1835 (67.25%), Query Frame = 0
Query:   49 RKGQDGWRKKGEYAKKEELLHQMKWPKTRRKALIAMWESDLALKPGEYSALLTAACQLGWASMASTIMGEMIASKMPVTTTTYDAGIKAACKANKDRLALLLIVDQYARREKRPWQCQSEKQGDKAAMLVEGIGQDGKAAIAAGRPAGGGXXXXGNVKKLTKSHFRANLAKVLQVTSRTGDVEGALEVLKYMSAMGISANPLVCQHLLATACKAGRGNAARVPVILRAMGDCGMRPDMSLLDALEMLFAANSPDVALDLVLDVARAGKKKXXXKDKGVGNIWRFETNASAAEAFSFVLKRADKAMRMGRHDVVDMTIQALLSDLPQSLFFGRGAGPDNPSAGAGA------TGGXXXXXXXXXXXXIGVPEDGGSAATAAASPAAAGPDEG-DQVGMDMDNDDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEEQVAFS---------------------------------------------NITTGAIVTGAXXXXXXXXXX------------ASKLSSAVSGALTGARGAGKGHQEXXXXXXXXXXXXXXVVGAP-------------QNKKWSRLGMKELNRRRRSEAIYRQKQGVAVLNHILADLAASS--TSGHTAAGVLDRWRSITLGGDWAGXXXXXXXXXXXXXXXVTAEIVRYSRPTEASYMHTMSALVQSGQWGRARSLLEVMRVDGIPPTVGCYSHLLTLLHARTSNQ-PEPSAHPGDEEALSMSNMSNMASMSPVE-ATFLWSEPTYEWDEVVSLMRDARSTEAGTYEVTDDMYHTALDVLQIVSQRPTHVSLGVVGPEVAPLPPPPAKVFLERAECLLQWALDAGMEMTVEVLLPVLTLSHTARDADKVFKYFEAMLEVDTPRQGWTYSATFAEAYNMAIHACEFGGEQHAERALAYVRTMGSASGLKPRAKQYELAIKAMVAARRYRDAYQLLAEAVENGAEKVGVYDAAMKACAMEGNPAQAETLVRIMLEMGLNPGSEAMSQLLLAYGNCGDVEGIQSVMTRAGNEVFTGGVMNALVYESVLRVLAPLEAWQDAETFVKEGEMVLPGSLTYRTYGYLMVAYAVEQQWGAAIELALGTGRWPEKTSGGPEGRFHPPELRETTCAVTLKWLLTQGVGGPDSMAARGAVGGGQGGXGAGVRAEEAMAEKALEYRKCGRELFTRLLASGAPLRSMRVMKAALGGIGAEPVPSSSSSSSSYPDPSEGSEDAPIYWKQTMPFWGDPEKPPSSSSXXXXXXXXXXXXXXASSGLLPDDWLLSVLPEDDAEREVAAQALHVGTVVEVLLRLYTTCDQPGANGFHSPTAVGLLQQAVSAACLAEDPDLADRLFTAWLDRASYSQLSQARLRSALRISLSEVLAAFFAEGQGEEGVYRGLSLIGRCRDAGLPPYPFDFLGAMRACNTAGLYSTALRLFDQLTAASNPFPSSSPPEYIYPDKASSSRYPDDSDAGSSGGAAAESDSDMDPENDSNPGSDDPEMSGSLSPSSGKAVVSRAQQQKRRGRGGGRKGEVPTGESEERSAEDGAMDGGFRNGSXXXXXXXXXXXXXXRRGEREGAGGGVGMRFENLNDIPDGELIPAAAATIALESCFLGGRRDQAMEIVWQLIRMRHPLTEACRNRAIVALTSGGHPDMALDMARGMEKDQHYADRATVEFVERFQKRAFEAAEAYDLAQEG--EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLXXXXXXXXXXXXXXXXXXXXSPSRLXXXX--LSPESSAT-EDGNG---------SSSDRPSELVLRFLPLLSEALRSKLRPGEGEDESAPQIGAEAKGEE-AVAESAP 1787
            +KGQD WRK G++AKKE+LLHQMKWPKTRRKALIAMWESD+ LK  EY ALLTA+CQLGWA+MAS IM EM+AS +PVTT TYDA IKAACKANKDRLALLLIVDQYAR     WQ  +EKQGDK A+   G GQ  K A +A       XXXX   K L+KS+FR NL+KVLQVTSRTGDVEG+L+VLKYM AMGI ANP VC  LLATACKAGRG++ARVP ILRAMGDCG+RPDM+LLDALEML  A SP+VALDL+++VA  G++K     KG+G  WRF+TN SAAEA+ FVLK A+KA   GR D+V  +I A+L DLPQSL++ RG+  +  SA   A      TGG                 D  +A TA+++ AA+   EG    G+   +DD +   XXXXXXXXXXXXXXXXXXXXXXXXXXX                                                      ++  G++    XXXXXXXXXX            ASKLSSAVSGALTGARG GKG +E        X XXXX                  +NK+W+RLG KELNR+RR+EAIYRQKQ V++LNHILADLA SS  TSGHTAA VLDRWRSITLGG  AG                 AE  RYSRPT+ASYM TM ALVQSGQWGRAR L+EVM  DGIPP VGCYSHLLTL+H R +++ P+P      EE+LSMS      S+SPV+ A FLWSEPTYEWDEVVSL+ DARSTE   Y +T+ MYHTALDVLQ++S+RP  VSLGVVG          AKVFL+RAECLL+WALDAG EMTVE+L P+L LSHTARDA+KVFKYFEA+LE DTPRQGW Y+ TFAEAY+MAIHACEFGGE   ERALAYVRTMGSASGLKP AKQYE AIKAMV+ARR+RDAYQLLAEAVENGAE V VYD A++ACA+EGNP+Q                          YGN GDVEGIQSVM RAGNEVFTGGVMNALVYESVL+ LAPLE WQDAE FVKEGEMVLPGSLTYRTYGYLMVAYAVE+QWGA +ELALGTGRWPE+ SGGPEGRFHPPELRETTCAV LKWLLTQGV G DS+A  G VG G G  G   +  EA+ E+ALEYRKCGRELFTRLLASGAPLRS+RV+KAALGGIGAEP PSSS       D  EGSEDAPI+WKQTMPFWGDPEKP SS+S                   L  DWLLS LPE++AEREVAAQALHV TVVEV LRLY+TC+QPGANG HSP AVGLLQQA+SAACL +DPDLADRL  AWL+RA  +QLSQARLRSALRISLSEVLAAFFAEGQGEEGVYRGLSLIGRCRDAGL PYPFDFLGAMRACNTAGLY+TALRLFDQLTA  +  PS   P   YP+                                                                                                                                            AAAATIALESCFLGGRRDQAMEIVWQLIR RHPLTEACRNRAIVALTS GHPDMALDMARGME+D+HYADRATVEFVERF+K AF+AAE+YD AQE   EXXXXXXXXXXXXXXXXXXX XXXXXXXX  ED            XXXXXXXXX    L      LS  SS T  D +G         SSSDRP+ELVLRFLPLLSEALRSKLRP E  +++A    AEA+ E+ A A S P
Sbjct:   19 KKGQDRWRKNGDFAKKEDLLHQMKWPKTRRKALIAMWESDMVLKREEYFALLTASCQLGWAAMASMIMEEMLASGVPVTTATYDAAIKAACKANKDRLALLLIVDQYAR-----WQ--AEKQGDKEALPAAGTGQGSK-ATSAXXXXXXXXXXXXXXKVLSKSYFRTNLSKVLQVTSRTGDVEGSLDVLKYMGAMGIPANPGVCHLLLATACKAGRGHSARVPGILRAMGDCGLRPDMALLDALEMLLDAGSPEVALDLLVEVADIGREK-----KGIGKFWRFDTNVSAAEAYLFVLKWAEKA---GRPDIVGSSIHAILRDLPQSLYYNRGSEGEEVSAATAAAAPVSATGGKGDA-------------DTPAAGTASSATAASDVVEGLPPTGVSAGDDDPDPLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALDLDAGSVTRSXXXXXXXXXXXXXXXXXVLGSGSASKLSSAVSGALTGARG-GKGTEESSGGEQGQXGXXXXXXXXXXXXXXXXXXXXXGKNKQWARLGQKELNRQRRNEAIYRQKQSVSILNHILADLADSSSFTSGHTAAEVLDRWRSITLGGAGAGGEAGG-----------VAETGRYSRPTQASYMFTMWALVQSGQWGRARFLVEVMTADGIPPKVGCYSHLLTLMHTRLASRLPDPDKDVHVEESLSMS------SLSPVDQAAFLWSEPTYEWDEVVSLLGDARSTERAKYAITEGMYHTALDVLQMISERPVDVSLGVVGGAATXXXXXXAKVFLDRAECLLEWALDAGTEMTVEILFPLLKLSHTARDAEKVFKYFEALLETDTPRQGWAYATTFAEAYDMAIHACEFGGES--ERALAYVRTMGSASGLKPAAKQYEAAIKAMVSARRFRDAYQLLAEAVENGAETVSVYDEALRACALEGNPSQP-------------------------YGNAGDVEGIQSVMARAGNEVFTGGVMNALVYESVLKTLAPLEVWQDAEMFVKEGEMVLPGSLTYRTYGYLMVAYAVEKQWGAVVELALGTGRWPERISGGPEGRFHPPELRETTCAVALKWLLTQGVSGCDSVA-HGGVGVGSGEVG--EQQAEAV-ERALEYRKCGRELFTRLLASGAPLRSVRVIKAALGGIGAEPGPSSS-------DSPEGSEDAPIFWKQTMPFWGDPEKPSSSTSTSPLAKDWKP---------LSSDWLLSSLPEEEAEREVAAQALHVCTVVEVFLRLYSTCEQPGANGLHSPMAVGLLQQAISAACLVDDPDLADRLLIAWLERAHVTQLSQARLRSALRISLSEVLAAFFAEGQGEEGVYRGLSLIGRCRDAGLLPYPFDFLGAMRACNTAGLYATALRLFDQLTAPDSGDPS---PAIEYPE--------------------------------------------------------------------------------------------------------------------------------------------AAAATIALESCFLGGRRDQAMEIVWQLIRRRHPLTEACRNRAIVALTSAGHPDMALDMARGMEQDRHYADRATVEFVERFEKWAFDAAESYDQAQEEREEXXXXXXXXXXXXXXXXXXXWXXXXXXXXGHEDERETAAVGESDAXXXXXXXXXXXXELVSSQPSLSASSSFTARDRHGXXXXXXXXVSSSDRPAELVLRFLPLLSEALRSKLRPEEDGEKTAQVDSAEAEKEDNATAPSRP 1616          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KMP5_9PHAE0.000e+063.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8W2_ECTSI0.000e+060.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1655..1675
NoneNo IPR availableCOILSCoilCoilcoord: 445..474
NoneNo IPR availableCOILSCoilCoilcoord: 1692..1712
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 935..1062
coord: 96..286
coord: 640..929
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 647..675
e-value: 0.89
score: 10.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 643..677
score: 9.383
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 932..966
score: 8.944
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 248..284
score: 5.766
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 898..928
score: 5.294
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 92..126
score: 6.544
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 213..247
score: 6.27
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 127..162
score: 5.941
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 600..778
e-value: 1.1E-5
score: 26.9
coord: 857..1002
e-value: 2.0E-16
score: 62.2
coord: 210..366
e-value: 1.8E-7
score: 32.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig78contigC-linearis_contig78:287527..306592 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig78.15354.1mRNA_C-linearis_contig78.15354.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig78 287527..306592 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig78.15354.1 ID=prot_C-linearis_contig78.15354.1|Name=mRNA_C-linearis_contig78.15354.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1788bp
RTKRWATVPNSAAVAEEGHPMSADATTAATKSGAPAKRRGGGRGRGRGRK
GQDGWRKKGEYAKKEELLHQMKWPKTRRKALIAMWESDLALKPGEYSALL
TAACQLGWASMASTIMGEMIASKMPVTTTTYDAGIKAACKANKDRLALLL
IVDQYARREKRPWQCQSEKQGDKAAMLVEGIGQDGKAAIAAGRPAGGGNG
GGGNVKKLTKSHFRANLAKVLQVTSRTGDVEGALEVLKYMSAMGISANPL
VCQHLLATACKAGRGNAARVPVILRAMGDCGMRPDMSLLDALEMLFAANS
PDVALDLVLDVARAGKKKKKKKDKGVGNIWRFETNASAAEAFSFVLKRAD
KAMRMGRHDVVDMTIQALLSDLPQSLFFGRGAGPDNPSAGAGATGGAGAG
ATGGADSGIGVPEDGGSAATAAASPAAAGPDEGDQVGMDMDNDDGEEEEE
EEGDDEEEEEEEEEEEEGDEEEDDEAGFEEQVAFSNITTGAIVTGAGAGG
GGGGASASKLSSAVSGALTGARGAGKGHQEEGGSGGGDGGGGGGVVGAPQ
NKKWSRLGMKELNRRRRSEAIYRQKQGVAVLNHILADLAASSTSGHTAAG
VLDRWRSITLGGDWAGGGGAAGEEAGGAAAAVTAEIVRYSRPTEASYMHT
MSALVQSGQWGRARSLLEVMRVDGIPPTVGCYSHLLTLLHARTSNQPEPS
AHPGDEEALSMSNMSNMASMSPVEATFLWSEPTYEWDEVVSLMRDARSTE
AGTYEVTDDMYHTALDVLQIVSQRPTHVSLGVVGPEVAPLPPPPAKVFLE
RAECLLQWALDAGMEMTVEVLLPVLTLSHTARDADKVFKYFEAMLEVDTP
RQGWTYSATFAEAYNMAIHACEFGGEQHAERALAYVRTMGSASGLKPRAK
QYELAIKAMVAARRYRDAYQLLAEAVENGAEKVGVYDAAMKACAMEGNPA
QAETLVRIMLEMGLNPGSEAMSQLLLAYGNCGDVEGIQSVMTRAGNEVFT
GGVMNALVYESVLRVLAPLEAWQDAETFVKEGEMVLPGSLTYRTYGYLMV
AYAVEQQWGAAIELALGTGRWPEKTSGGPEGRFHPPELRETTCAVTLKWL
LTQGVGGPDSMAARGAVGGGQGGGGAGVRAEEAMAEKALEYRKCGRELFT
RLLASGAPLRSMRVMKAALGGIGAEPVPSSSSSSSSYPDPSEGSEDAPIY
WKQTMPFWGDPEKPPSSSSPPSSSPSASSTPACASSGLLPDDWLLSVLPE
DDAEREVAAQALHVGTVVEVLLRLYTTCDQPGANGFHSPTAVGLLQQAVS
AACLAEDPDLADRLFTAWLDRASYSQLSQARLRSALRISLSEVLAAFFAE
GQGEEGVYRGLSLIGRCRDAGLPPYPFDFLGAMRACNTAGLYSTALRLFD
QLTAASNPFPSSSPPEYIYPDKASSSRYPDDSDAGSSGGAAAESDSDMDP
ENDSNPGSDDPEMSGSLSPSSGKAVVSRAQQQKRRGRGGGRKGEVPTGES
EERSAEDGAMDGGFRNGSDDEEEDGGGTGSGGRRGEREGAGGGVGMRFEN
LNDIPDGELIPAAAATIALESCFLGGRRDQAMEIVWQLIRMRHPLTEACR
NRAIVALTSGGHPDMALDMARGMEKDQHYADRATVEFVERFQKRAFEAAE
AYDLAQEGEEEEEDEDDDVENAEDSDDDDDDDDDDDDWGEDLEEEEEEEE
EETDDRDDDELASPSRLPPPPLSPESSATEDGNGSSSDRPSELVLRFLPL
LSEALRSKLRPGEGEDESAPQIGAEAKGEEAVAESAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf