prot_C-linearis_contig77.15335.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig77.15335.1
Unique Nameprot_C-linearis_contig77.15335.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length165
Homology
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BLAST of mRNA_C-linearis_contig77.15335.1 vs. uniprot
Match: D8LJG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG9_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 2.660e-6
Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 0 
Query:  115 EQRAMEAKADRDPLRNVSLQADAAGQIAFGLPMQGTLTHGTDRGYSERQK 164
            E+RA  AKAD  P +      DAA Q+ F +P    +THGTDRG+ ERQK
Sbjct:    2 ERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQK 51
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig77.15335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJG9_ECTSI2.660e-650.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig77contigC-linearis_contig77:911266..913929 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig77.15335.1mRNA_C-linearis_contig77.15335.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig77 907918..914019 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig77.15335.1 ID=prot_C-linearis_contig77.15335.1|Name=mRNA_C-linearis_contig77.15335.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=165bp
MFGQLMPHLNATYLYLGSMKELYEDFAESRRTAGQSIPSYTYFTRVWREN
RSHVKPKTGGDFMKCYHCTVYKDTRFGAPGIRPSTNPATLSAAKEAHILH
LKGIELDRACLLRNEQRAMEAKADRDPLRNVSLQADAAGQIAFGLPMQGT
LTHGTDRGYSERQK*
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