prot_C-linearis_contig77.15334.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig77.15334.1
Unique Nameprot_C-linearis_contig77.15334.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length91
Homology
BLAST of mRNA_C-linearis_contig77.15334.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.200e-19
Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    1 MRDPNTQIDIPDHVTWQMNLAIDSNTGDSAFGADGSVIPAAKGILGETSVPTVDEDGEPIMDGMESIRGTTEQYHVEGPLSVEFDMD 87
            MRDP  + D+PDH+TWQMN+AI              V  AAKGILG+T VPT D DG+PIM G+E+IRG+ E Y V+G L V+F  D
Sbjct:  534 MRDPTDRFDLPDHLTWQMNMAIHHE----------DVSHAAKGILGQTFVPTRDADGKPIMTGLEAIRGSEEDYRVDGALGVDFVQD 610          
BLAST of mRNA_C-linearis_contig77.15334.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.890e-17
Identity = 44/80 (55.00%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    7 QIDIPDHVTWQMNLAIDSNTGDSAFGADGSVIPAAKGILGETSVPTVDEDGEPIMDGMESIRGTTEQYHVEGPLSVEFDM 86
            Q  +PDH+TWQMNLA+D N           V   AKG+LGET VPT    GE IM GME+IRGT E YHVEGPL ++F +
Sbjct: 1000 QFGLPDHMTWQMNLAVDHN----------DVSLNAKGVLGETMVPTRTVSGEYIMHGMEAIRGTQEDYHVEGPLGLDFTL 1069          
BLAST of mRNA_C-linearis_contig77.15334.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 4.010e-17
Identity = 45/82 (54.88%), Postives = 52/82 (63.41%), Query Frame = 0
Query:    1 MRDPNTQIDIPDHVTWQMNLAIDSNTGDSAFGADGSVIPAAKGILGETSVPTVDEDGEPIMDGMESIRGTTEQYHVEGPLSV 82
            MRDP  Q D+PDH+TWQMNLA+D N           V  AAKGILGET VPT D  G+PIM GME+IRGT E     G + +
Sbjct:  237 MRDPTDQYDLPDHLTWQMNLAVDHN----------QVSYAAKGILGETFVPTRDASGKPIMTGMEAIRGTEEDCKCGGNVMM 308          
BLAST of mRNA_C-linearis_contig77.15334.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 4.780e-17
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 0
Query:    7 QIDIPDHVTWQMNLAIDSNTGDSAFGADGSVIPAAKGILGETSVPTVDEDGEPIMDGMESIRGTTEQYHVEGPLSVEFDM 86
            ++ +PDHVTWQMNLA+D N           V  +AKG+LGET +PT    GE +M GME+IRGT E YHV+GPL + F++
Sbjct:  818 ELGLPDHVTWQMNLAVDHN----------DVSLSAKGVLGETLIPTRAASGEYVMHGMEAIRGTEEDYHVDGPLGLGFNL 887          
BLAST of mRNA_C-linearis_contig77.15334.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.290e-15
Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 MRDPNTQIDIPDHVTWQMNLAIDSNTGDSAFGADGSVIPAAKGILGETSVPTVDEDGEPIMDGMESIRGTTEQYHVEGPLSVEF 84
            MRDP  + DIPDH+TWQMNLA D+         D +V   A GILGET   T+D +G PIM+GM +IRG+ E Y V+GPL   F
Sbjct:  360 MRDPTDRFDIPDHLTWQMNLAFDN--------VDLAV--DATGILGETQQHTLDANGNPIMEGMAAIRGSQEDYLVDGPLDNVF 433          
BLAST of mRNA_C-linearis_contig77.15334.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 2.260e-12
Identity = 39/67 (58.21%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    7 QIDIPDHVTWQMNLAIDSNTGDSAFGADGSVIPAAKGILGETSVPTVDEDGEPIMDGMESIRGTTEQ 73
            Q  +PDH TWQMNLAIDS+          SV   A+G+LGET VPT D DGE +M GMESIRGT E+
Sbjct:  277 QYGLPDHSTWQMNLAIDSD----------SVGVGAQGVLGETLVPTRDADGEYVMHGMESIRGTQEE 333          
BLAST of mRNA_C-linearis_contig77.15334.1 vs. uniprot
Match: D7FUC7_ECTSI (Imm upregulated 13 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC7_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 3.690e-12
Identity = 37/70 (52.86%), Postives = 42/70 (60.00%), Query Frame = 0
Query:   18 MNLAIDSNTGDSAFGADGSVIPAAKGILGETSVPTVDEDGEPIMDGMESIRGTTEQYHVEGPLSVEFDMD 87
            MN+ ID N           V  +A GILGETS PT D +GE IM GME+IRG+ E Y V GPL V F MD
Sbjct:    1 MNMGIDHN----------EVSYSATGILGETSTPTKDANGEDIMTGMEAIRGSEEDYRVTGPLDVTFAMD 60          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig77.15334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KVF3_9PHAE3.200e-1952.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF50_9PHAE1.890e-1755.00LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5L5Y7_9PHAE4.010e-1754.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRC1_9PHAE4.780e-1751.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7V7_9PHAE3.290e-1552.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRS2_9PHAE2.260e-1258.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUC7_ECTSI3.690e-1252.86Imm upregulated 13 n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig77contigC-linearis_contig77:865979..866510 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig77.15334.1mRNA_C-linearis_contig77.15334.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig77 865970..866810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig77.15334.1 ID=prot_C-linearis_contig77.15334.1|Name=mRNA_C-linearis_contig77.15334.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=91bp
MRDPNTQIDIPDHVTWQMNLAIDSNTGDSAFGADGSVIPAAKGILGETSV
PTVDEDGEPIMDGMESIRGTTEQYHVEGPLSVEFDMDHEW*
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