prot_C-linearis_contig76.15237.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15237.1
Unique Nameprot_C-linearis_contig76.15237.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length683
Homology
BLAST of mRNA_C-linearis_contig76.15237.1 vs. uniprot
Match: A0A6H5JWD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD0_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 1.660e-102
Identity = 259/520 (49.81%), Postives = 299/520 (57.50%), Query Frame = 0
Query:    1 MSLHFPQDQLSRREKQEIFKRSLDDQRRIKQESSAQQ-HQLPSNADAGNQGRHVPGLAATL--PAAVNVPRLNHI-PGLDQHQAGYAPRFEGSASPQQEKQPYMSALSEMNGRPLHIRQQQFQKESQYRNMLKDQIAENKKRKDAEKAXXXXXXXXXXXXVRRLQGIPAPRRQQHKQFQESPDHPLPSPGRLPPAIHYPASNPNPNPQLQRPVGNAGSQNYIQAEAVAPVHAAS--GGYSARNPAGINGLVGNERWQGQRNAP----DGLDGDRRRIYSERQEQPRAAAYPDDFAANGRQDPTSQ-PARTAAPPRPYPYGGDAQETGNAGMRPLDRFGNSAQALSGEGAARKLAFERGDARWVEGCAAGEAESASDSVPRADFDELSSLCRDLLHEQKQLRQRLEEREGRERLAAERSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS--SDARRRVPTSVRESALRRDQGSKP-----------KSGVAFGSSRPRMPGPTVDKPRVAANP 496
            MSLHF QD LS+REKQE+FK+SLDDQRR+KQE+S QQ + LPSN      G HVPGLA++   P  +++P LN + PGL+Q   GYAPRFEGS SPQQ+KQPYMSALSEMNGRPLH+RQQQFQKESQYRNMLKDQI ENKKRK+AEKA            VRRLQG+  PRRQQH QFQESPDHPLPSPGRLPPA   P        Q Q   GN   +    A A+APV+ ++  GGY++ NP GIN        Q    AP    D +  D RR Y+  Q Q   A    D    GRQD  S   ART    R +      Q  G+AG R   +F  + QA   E A  KLAFE       EG     A  + DSVPRADFDELS+LCRDLL EQK+LR++LE+RE R+RLAAER  +                                   S   D  RR  T     A R   GS P           KSGVAFGS+R RMP PTV+KPRV   P
Sbjct:    1 MSLHFSQDTLSKREKQEMFKKSLDDQRRLKQETSHQQDNNLPSNT-----GNHVPGLASSSVPPDDLSIPGLNQVVPGLNQR-PGYAPRFEGSPSPQQDKQPYMSALSEMNGRPLHVRQQQFQKESQYRNMLKDQIEENKKRKEAEKAKLDEEKRLELEEVRRLQGMLGPRRQQHAQFQESPDHPLPSPGRLPPA--RPTHATVDRHQHQHRGGNVSDR----AGAIAPVNGSAMYGGYASMNPHGINDRGYEGGGQRHPGAPAYRRDQVSLDYRRPYAHPQ-QTDTAVCAGDHDPGGRQDLASDVQARTQTSSRRFDE--YRQGFGDAG-RAQGQFDTTGQARGAESATGKLAFEE------EG--GSSAAQSCDSVPRADFDELSNLCRDLLLEQKELRRKLEDREERDRLAAERPREEMTRRPKKHQDREHQHQRGVARSGGAGRQPSGGTTSRRGDRIRRTQTLSGSGASRMQGGSNPSTLSRERKPVPKSGVAFGSTRSRMPSPTVEKPRVPPEP 496          
BLAST of mRNA_C-linearis_contig76.15237.1 vs. uniprot
Match: D7FQR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR3_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 2.630e-71
Identity = 198/417 (47.48%), Postives = 232/417 (55.64%), Query Frame = 0
Query:  100 MSALSEMNGRPLHIRQQQFQKESQYRNMLKDQIAENKKRKDAEKAXXXXXXXXXXXXVRRLQGIPAPRRQQHKQFQESPDHPLPSPGRLPPAIHYPASNPNPNPQLQRPVGNAGSQNYIQAEAVAPVH--AASGGYSARNPAGINGLVGNERWQGQRNAP----DGLDGDRRRIYSERQEQPRAAAYPDDFAANGRQDPTSQ-PARTAAPPRPYPYGGDAQETGNAGMRPLDRFGNSAQALSGEGAARKLAFERGDARWVEGCAAGEAESASDSVPRADFDELSSLCRDLLHEQKQLRQRLEEREGRERLAAER-------------SAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSDARRRVPTSVRESALRRDQGSKPKSGVAFGSSRPRMPGPTVDKPRVAANP 496
            MSALSEMNGRPLH+RQQQFQKESQYRNMLKDQI ENKKRK+AEKA    XXX     VRRLQG+  PRRQQH QFQESPDHPLPSPGRLPPA H  A+      Q Q   GN   +    A A+AP +  A +GGY++ NP GIN        QG   AP    D + GD  R Y+    Q   A Y  D+A +GRQD  S   ART    R +      Q  G+AG RP  R   + QA   E A RK AFE       EG ++  A  +SDSVPRADFDELS+LCRDLL EQK+LR++LE+RE R+RLAAER               +                                  +S     R+      S LRR++   PKSGVAFGS+R RMP PT++KPRV   P
Sbjct:    1 MSALSEMNGRPLHVRQQQFQKESQYRNMLKDQIEENKKRKEAEKAKLDEXXXLELEEVRRLQGMSGPRRQQHAQFQESPDHPLPSPGRLPPAKHSHATVGRH--QHQHRGGNVSDR----AGAIAPANGSAMNGGYASMNPPGINDRGYEGGGQGHPGAPAYRRDQVSGDYMRPYAH-PHQTDTAVYAGDYAPDGRQDLASDVQARTHTSSRRFDE--YRQGFGDAG-RPQGRLDTTGQARGAESATRKPAFE------AEGVSS--APQSSDSVPRADFDELSNLCRDLLLEQKELRRKLEDREERDRLAAERPREEMTRRLKKHQDREHQHQRGVARSGGAGGRPSGGTTSRSGDIIRRTQSLSGSGASRMQGGSNPSTLRRERKPVPKSGVAFGSTRSRMPSPTLEKPRVPPEP 399          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWD0_9PHAE1.660e-10249.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQR3_ECTSI2.630e-7147.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..163
NoneNo IPR availableCOILSCoilCoilcoord: 379..399

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:849615..853060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15237.1mRNA_C-linearis_contig76.15237.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 849615..853060 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15237.1 ID=prot_C-linearis_contig76.15237.1|Name=mRNA_C-linearis_contig76.15237.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=683bp
MSLHFPQDQLSRREKQEIFKRSLDDQRRIKQESSAQQHQLPSNADAGNQG
RHVPGLAATLPAAVNVPRLNHIPGLDQHQAGYAPRFEGSASPQQEKQPYM
SALSEMNGRPLHIRQQQFQKESQYRNMLKDQIAENKKRKDAEKAKLEEEK
RRELEEVRRLQGIPAPRRQQHKQFQESPDHPLPSPGRLPPAIHYPASNPN
PNPQLQRPVGNAGSQNYIQAEAVAPVHAASGGYSARNPAGINGLVGNERW
QGQRNAPDGLDGDRRRIYSERQEQPRAAAYPDDFAANGRQDPTSQPARTA
APPRPYPYGGDAQETGNAGMRPLDRFGNSAQALSGEGAARKLAFERGDAR
WVEGCAAGEAESASDSVPRADFDELSSLCRDLLHEQKQLRQRLEEREGRE
RLAAERSAQQEEATPQQQQQQHRGAPRRGGGRSLAAQGTSSSSVSSDARR
RVPTSVRESALRRDQGSKPKSGVAFGSSRPRMPGPTVDKPRVAANPKPRG
PGGGHDRRARVSKSEPIPATATAKSLETRQRQTRNVGSTNRGGSGGSGEK
LYTTREPSDSGWPSRNTTQGARGDIKDAGTGRFAGSDRDRAVGGEWTSRE
NPAPRSPETLGGGGNSTIHSLLRNAGGAARHGVASREAEPRPCGDELGGE
STFLAAHPMDSGLVSSQGRGLGLVGRGATGHF*
back to top