prot_C-linearis_contig76.15233.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15233.1
Unique Nameprot_C-linearis_contig76.15233.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length694
Homology
BLAST of mRNA_C-linearis_contig76.15233.1 vs. uniprot
Match: A0A6H5JWK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK7_9PHAE)

HSP 1 Score: 374 bits (959), Expect = 1.190e-118
Identity = 299/536 (55.78%), Postives = 347/536 (64.74%), Query Frame = 0
Query:  173 LSLSVSKLEERNEALERNVTAVPNAAEAAEGRAKAAEARFARLVVWAREEERRRLQAEERLTKACEAGRALEASSKALGEEAHKSKRQLDERRFKLEGALEDLRTRTSENERLEAQATTVRGQTEALRELADARGLEVRELRDKITGLVKEAKGMSSENVELRKHMSSEQERWRALERSRAKQDERRRTEMEQKCDDIHALRYRVQELTARVSSETARRQGAEEDARRSQEMGRRRQFSLLEGRKAAMPMRTGAPLAHSFSPHLSDPAPRGGGPGPAAQDAWKSWGNHASGTARDTAT--TTPTGAMTSGARSAATISDLLDSPIRVRRYNHXXXXXXDQNHGDHHQSADGGRWREATGTTQPDYPAAVAARNVHAPSPGXXXXXXXXXXXXXXLSAASLRASLRRPGGHRSRSPSSPIAASASVTPIAAAGPTPSLRPRPHASSPVGQRLDKDRDRLGEGVTSRTRPRPRRAPSEDHGDERDRGRER----------GDESAVHASDRGSEWWAAEGPGE-QGLDGEP-GLGDGP 694
            LS ++S+LE R E LER+V A   AA+A  GR K AEARFARL+ WAREEE  RL+AEE L KACE+ + LEA  KAL EEAH+SKRQLDERR K+EGALEDLR RT+ENERLEAQA T+ GQ +ALRELADARGLEV+E+R+K   LVKEAK MS ENV+LRKHM+SEQERWRA ERSRAKQDERRR E++QKCDD+HALRYRVQEL AR++ ET RR GAEEDARRSQEM RR    LLEGRKAA+ ++T   LA S  P+ S PA   GG  PA + AWK WG+      RD AT  T  T AMTSGARS+ TISD      R            + + GDH       RW++   +   D       RN  +PS    XXXXXXXXXXXX+SAA+LRASLR PGG RS SP     A  S+      G  PS +PR HA SP G     D  R G    +R RP+PRRAPSED  D      E           G+     + + G EWWA  G GE Q L+G+P GL D P
Sbjct:   17 LSRAISRLEGRCEELERSVRAESEAAKAEVGRTKVAEARFARLLAWAREEEADRLRAEEALGKACESRQVLEARGKALEEEAHESKRQLDERRLKMEGALEDLRRRTAENERLEAQAKTLGGQVDALRELADARGLEVKEMREKFARLVKEAKRMSQENVDLRKHMNSEQERWRAAERSRAKQDERRRIELDQKCDDLHALRYRVQELEARLTRETTRRHGAEEDARRSQEMERRSMDELLEGRKAALSVQTRIGLAQSH-PYHSGPA--AGGQTPAPEHAWKPWGS------RDNATGGTATTAAMTSGARSS-TISDAFHPGGRALH------EESEDHPGDHC------RWQDHATSRGRD-------RNGLSPS-AAIXXXXXXXXXXXXVSAAALRASLRGPGGQRSPSP-----AVGSI----GVGLKPSAQPRAHARSPKGL----DNSRAG----ARPRPQPRRAPSEDDCDHCAGNGEAAIKLSTRDGVGEGVECGSDEEGGEWWA--GGGEMQDLNGKPSGLKDTP 503          
BLAST of mRNA_C-linearis_contig76.15233.1 vs. uniprot
Match: D7FQR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR7_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 1.840e-110
Identity = 199/264 (75.38%), Postives = 226/264 (85.61%), Query Frame = 0
Query:  145 AVEEMDGLRRDVASANRERAIWRQRDGDLSLSVSKLEERNEALERNVTAVPNAAEAAEGRAKAAEARFARLVVWAREEERRRLQAEERLTKACEAGRALEASSKALGEEAHKSKRQLDERRFKLEGALEDLRTRTSENERLEAQATTVRGQTEALRELADARGLEVRELRDKITGLVKEAKGMSSENVELRKHMSSEQERWRALERSRAKQDERRRTEMEQKCDDIHALRYRVQELTARVSSETARRQGAEEDARRSQEMGRRR 408
            AV EMD LRRDVASAN+ERA W+ RD  LSL++S+LE R EALER+V A   AA+A  GR KAAEARFARL+ WAREEE+ R+QAEE L +ACE+GRALEA  K L +EAH+SKRQLDERR K+EGALEDLR RT+ENERLEAQA TV GQ +ALRELADARGLEV+E+R+K+  LV+EAK MS ENV+LRKHMSSEQERWRA ERSRAKQDERRR E++QKCDD+HALRYRVQEL AR+S ETARR GAEEDARRSQEM RRR
Sbjct:    3 AVGEMDDLRRDVASANQERAAWKLRDDGLSLTISRLEGRCEALERSVRAESEAAKAEVGRTKAAEARFARLLEWAREEEKHRVQAEEVLGRACESGRALEARGKVLEKEAHESKRQLDERRLKMEGALEDLRRRTAENERLEAQAKTVGGQVDALRELADARGLEVKEMREKLARLVREAKRMSQENVDLRKHMSSEQERWRAAERSRAKQDERRRIELDQKCDDLHALRYRVQELEARLSRETARRHGAEEDARRSQEMERRR 266          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWK7_9PHAE1.190e-11855.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQR7_ECTSI1.840e-11075.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 258..288
NoneNo IPR availableCOILSCoilCoilcoord: 219..239
NoneNo IPR availableCOILSCoilCoilcoord: 135..169
NoneNo IPR availableCOILSCoilCoilcoord: 377..397

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:829352..834762 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15233.1mRNA_C-linearis_contig76.15233.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 828716..834762 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15233.1 ID=prot_C-linearis_contig76.15233.1|Name=mRNA_C-linearis_contig76.15233.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=694bp
MSLRWSTPRNSGSESRPVFQTGMNTKSSAAGRGRDGRGGEDTTTTTTTIT
TGERAKRLQRKPPLPTAAPGAAAAAAETFADAQVAAGARTANNARDRNLS
RRQQQQQQQQRLMPAHHQKAGGIDAGRSGSRVSDRKHLLRMLRQAVEEMD
GLRRDVASANRERAIWRQRDGDLSLSVSKLEERNEALERNVTAVPNAAEA
AEGRAKAAEARFARLVVWAREEERRRLQAEERLTKACEAGRALEASSKAL
GEEAHKSKRQLDERRFKLEGALEDLRTRTSENERLEAQATTVRGQTEALR
ELADARGLEVRELRDKITGLVKEAKGMSSENVELRKHMSSEQERWRALER
SRAKQDERRRTEMEQKCDDIHALRYRVQELTARVSSETARRQGAEEDARR
SQEMGRRRQFSLLEGRKAAMPMRTGAPLAHSFSPHLSDPAPRGGGPGPAA
QDAWKSWGNHASGTARDTATTTPTGAMTSGARSAATISDLLDSPIRVRRY
NHHHHHHHDQNHGDHHQSADGGRWREATGTTQPDYPAAVAARNVHAPSPG
PPPPQPFRSPPPPPLSAASLRASLRRPGGHRSRSPSSPIAASASVTPIAA
AGPTPSLRPRPHASSPVGQRLDKDRDRLGEGVTSRTRPRPRRAPSEDHGD
ERDRGRERGDESAVHASDRGSEWWAAEGPGEQGLDGEPGLGDGP
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