prot_C-linearis_contig76.15175.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15175.1
Unique Nameprot_C-linearis_contig76.15175.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length211
Homology
BLAST of mRNA_C-linearis_contig76.15175.1 vs. uniprot
Match: A0A6H5L4A0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4A0_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 7.740e-93
Identity = 151/203 (74.38%), Postives = 161/203 (79.31%), Query Frame = 0
Query:   10 VLAGFLAPACDGFVPGAALPSP-QHQQHRSTSTMSMKPGATPPPLRSRIEHA-VAVAVATSVVALGVASAPVAVAEELPSGTNPFTSICMGFGCGEFQGLDYPGAPAPTDEESITFKSFLDSLDKGLVAKVDFLAGGNKAYAFVKSSASGEPTRIRVGEGYPDEQGNGWSSPLWVVRALNDRNVPYHFEYDLGKGRATQTVNK 210
            +L GF+    + FVP   L +   H   R+T  MSMK G    PLRSRIE A VA AVATSV  L  AS P A AEELP GTNPFTSICMGFGCGEFQGLDYPGAPAPTDE+SITFKSFL SLDKGL  KVDFLAGG+KAYAFVK  A+GE TRIRVGEGYP+EQGN WSSPLWVVRALNDRNVPYHFEY+LGKGRATQTV K
Sbjct:    8 LLLGFVLCFSEAFVPTTPLATTCSHPATRAT--MSMKQGT---PLRSRIERAAVAAAVATSVAILSTASVPAAFAEELPPGTNPFTSICMGFGCGEFQGLDYPGAPAPTDEDSITFKSFLQSLDKGLDTKVDFLAGGDKAYAFVKPDAAGEATRIRVGEGYPNEQGNSWSSPLWVVRALNDRNVPYHFEYNLGKGRATQTVAK 205          
BLAST of mRNA_C-linearis_contig76.15175.1 vs. uniprot
Match: A0A7S2G0Q6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0Q6_9STRA)

HSP 1 Score: 115 bits (288), Expect = 9.170e-29
Identity = 58/123 (47.15%), Postives = 81/123 (65.85%), Query Frame = 0
Query:   76 SAPVAVAEELPSGTNPFTSICMGFGCGEFQGLDYPGAPAPTDEESITFKSFLDSLDKGLVAKVDFLA-GGNKAYAFVKSSASGEPTRIRVGEGYPDEQGNGWSSPLWVVRALNDRNVPYHFEY 197
            S P A  + L +G NPF S CMGFGC + +GL Y GA AP   ES+ + SFL  ++   VA V+F+   G+ AYA +K     +  RIR+GEG P+E+GNGWSSP++V+R L+++ VPY F +
Sbjct:   49 STPEANQQLLKTGVNPFNSACMGFGCSDAKGLRYGGAEAPEGIESLPYSSFLKMVESKEVASVEFIPPSGDVAYAILKE----DNKRIRIGEGMPEEKGNGWSSPMYVMRILDNKGVPYKFAF 167          
BLAST of mRNA_C-linearis_contig76.15175.1 vs. uniprot
Match: A0A7S2WW10_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW10_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.650e-25
Identity = 55/123 (44.72%), Postives = 75/123 (60.98%), Query Frame = 0
Query:   85 LPSGTNPFTSICMGFGCGEFQGLDYPGAPAPTDEESITFKSFLDSLDKGLVAKVDFLA-GGNKAYAFVKSSASGEPTRIRVGEGYPDEQGNGWSSPLWVVRALNDRNVPYHFEYDLGKGRATQ 206
            L    NPF S CMGFGC + +GL+Y GA  P  E SI F  FL+ L+   VA V+FL   G+ AYA ++ ++     RIR+GEG+P+E    WSSPL+V+R L ++ VPY F +     R +Q
Sbjct:   89 LSDSVNPFNSACMGFGCSDARGLEYGGAAKPDSENSIPFSRFLELLEAKKVASVEFLPPSGDVAYATLEDNS-----RIRIGEGFPEELPGAWSSPLYVMRILQNKGVPYTFAFKKVPYRGSQ 206          
BLAST of mRNA_C-linearis_contig76.15175.1 vs. uniprot
Match: W7TQH3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQH3_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.920e-25
Identity = 64/165 (38.79%), Postives = 91/165 (55.15%), Query Frame = 0
Query:   57 IEHAVAVAVATSVVALGVASAPVAVAEELPSGTNPFTSICMGFGCGEFQGLDYPGAPA-PTDEESITFKSFLDSLDKGLVAKVDFLAGGNKAYAFVK-----SSASGE-----PTRIRVGEGYPDEQGNGWSSPLWVVRALNDRNVPYHFEYDL-GKGRATQTVN 209
            +E   +  V T   A  + SAP+ VA E       + S C+GFGCG + G DY GAP   T E++I   SFL  +++  + KV+ L GGN AYA+V         +GE       R+R+GEG+P E G  WSSPLW+VR L D+ +PY   +D  G  + T+ ++
Sbjct:   84 VETVSSTTVNTRAAASALYSAPMVVAAE----QTVWESTCLGFGCGSYNGPDYGGAPKLETGEKNIDMPSFLKLVEEKRIEKVELLEGGNVAYAYVAPRRGDKEGAGEGKEAGAERVRIGEGFPVENGKTWSSPLWMVRILKDKQIPYTLGFDFSGSDKVTRALS 244          
BLAST of mRNA_C-linearis_contig76.15175.1 vs. uniprot
Match: A0A8J2SCX3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCX3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.050e-21
Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = 0
Query:   90 NPFTSICMGFGCGEFQGLDYPGAPAPTDEESITFKSFLDSLDKGLVAKVDFLAGGNKAYAFVKSSASGEPTRIRVGEGYPDEQGNGWSSPLWVVRALNDRNVP 192
            +PF S+C+GFGC   QG+D PGAPAPTDE+SI +K  L+ ++   V  V+F        A  K        R RVGEGYP E G  WSSPL+V R L++  +P
Sbjct:   44 DPFNSMCLGFGCNSPQGVDSPGAPAPTDEDSIPWKQALELIEAKKVKSVEF-----NDVAMDKCWVVTSDGRFRVGEGYPIEDGRSWSSPLFVTRILDNNQIP 141          
BLAST of mRNA_C-linearis_contig76.15175.1 vs. uniprot
Match: A0A8J5X1D7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X1D7_DIALT)

HSP 1 Score: 94.0 bits (232), Expect = 1.400e-20
Identity = 61/136 (44.85%), Postives = 78/136 (57.35%), Query Frame = 0
Query:   67 TSVVALGVASAPVAVAEELPSGTNPFTSICMGFGCGEFQGLDYPGAPAPTDEESITFKSFLDSL----DKGLVAKVDFL-AGGNKAYAFVKSSASGEPTRIRVGEGYPDEQGNGWSSPLWVVRALNDRNVP--YHF 195
            T+   LG A  P AVA++     + F S C+GFGC  + G  + G  APTDE ++ F  F   L     +  VAKVD   AGG+K Y    S A G  T+ R+GEG P +  NGWSSPLW+VR L++ NVP  YHF
Sbjct:   43 TAAAFLGTAIGP-AVAQD----RSIFDSTCLGFGCNNYNGQGFGGMAAPTDEATMPFAQFAAQLKDPEQRARVAKVDIYGAGGDKVYV---SFADG--TKARLGEGLPIDDSNGWSSPLWLVRILDNVNVPHAYHF 168          
BLAST of mRNA_C-linearis_contig76.15175.1 vs. uniprot
Match: A0A7S0YV26_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YV26_9CRYP)

HSP 1 Score: 83.6 bits (205), Expect = 2.260e-17
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0
Query:  115 PTDEESITFKSFLDSLDKGLVAKVDFLA-GGNKAYAFVKSSASGEPTRIRVGEGYPDEQGNGWSSPLWVVRALNDRNVPYHFEY 197
            PTDEES++FK F D L+ G V +VDF    G+KAYA  K        +IR+GEG+P E GN  SSPL+VV+ L D+ VPY F +
Sbjct:   11 PTDEESVSFKEFFDGLNAGRVERVDFYGYSGDKAYATFKDGK-----KIRIGEGFPVEIGNEASSPLFVVKLLGDKGVPYKFHF 89          
BLAST of mRNA_C-linearis_contig76.15175.1 vs. uniprot
Match: A0A7S2XT96_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XT96_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.050e-16
Identity = 54/121 (44.63%), Postives = 72/121 (59.50%), Query Frame = 0
Query:   79 VAVAEELPSGT--NPFTSICMGFGCGEFQGLDYPGAPAPTDEESITFKSFLDSLDKGLVAKVDFLA-GGNKAYAFVKSS-ASGEPTRIRVGEGYPDEQGNGWSSPLWVVRALNDRNVPYHF 195
            VA AEE P G   N F ++  G+   EF GLD     +   E S+ +K FL+ L    VA V+FLA  G+ AYA  K+   +G  T IR+GEGYP EQ NG+SSP + VR++ ++ VPY F
Sbjct:    1 VAGAEE-PDGRDLNAFNTLTFGYRGSEFGGLD----ASTLTEPSVPYKEFLEKLTNEEVAFVEFLAPDGDVAYATFKTKDGTGTETPIRIGEGYPIEQHNGYSSPAFAVRSVANKKVPYKF 116          
BLAST of mRNA_C-linearis_contig76.15175.1 vs. uniprot
Match: A0A7S2L286_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L286_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.150e-15
Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 0
Query:   90 NPFTSICMGFGCGEFQGLDYPGAPAPTDEESITFKSFLDSLDKGLVAKVDFLA-GGNKAYAFVKSSASGEPTRIRVGEGYPDEQGNGWSSPLWVVRALNDRNVPYHF 195
             PF S+   +  GE   +D    P+  +E S+++  FL+ L    V  V+FLA  G+KAYA  KS  S     IR+GEGYP E   GWSSP +VV+A+    VPY F
Sbjct:  101 TPFNSLAFNYRGGESPTVD----PSELNEPSVSYAEFLEKLSANQVTFVEFLAPNGDKAYATFKSEDSSNSKPIRIGEGYPIEDPQGWSSPAFVVKAVAKAKVPYKF 203          
BLAST of mRNA_C-linearis_contig76.15175.1 vs. uniprot
Match: A0A7S4AY04_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AY04_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.200e-15
Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 0
Query:   63 VAVATSVVALGVASAPVAVAEELP-----SGTNPFTSICMGFGCGEFQGLDYPGAPAPTDEESITFKSFLDSLDKGLVAKVDFLA-GGNKAYAFVKSSASGEPTRIRVGEGYPDEQGNGWSSPLWVVRALNDRNVPYHF 195
            VA+  SV A G++S   A+AE+ P     +    F  +   +  GEF GLD     +  DE S+++K F + L  G VA V+FLA  G+ AY   K     E  +IR+GEGYP EQ +G+SSP++ +R + +  +PY F
Sbjct:   43 VAIGGSVAAFGISSP--AMAEQAPETRQGNEVTAFNGLAFNYKGGEFGGLD----ASTLDEPSVSYKDFNEKLKAGEVAFVEFLAPDGDVAYVTFKD----EDKKIRIGEGYPIEQHDGYSSPMFCIRTVKNAGIPYKF 171          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5L4A0_9PHAE7.740e-9374.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2G0Q6_9STRA9.170e-2947.15Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WW10_9STRA1.650e-2544.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TQH3_9STRA1.920e-2538.79Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A8J2SCX3_9STRA1.050e-2146.60Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J5X1D7_DIALT1.400e-2044.85Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S0YV26_9CRYP2.260e-1751.19Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S2XT96_9STRA3.050e-1644.63Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2L286_9STRA1.150e-1542.06Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4AY04_9STRA3.200e-1538.13Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.637

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:308603..310250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15175.1mRNA_C-linearis_contig76.15175.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 308530..311291 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15175.1 ID=prot_C-linearis_contig76.15175.1|Name=mRNA_C-linearis_contig76.15175.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=211bp
MKTPCSAGLVLAGFLAPACDGFVPGAALPSPQHQQHRSTSTMSMKPGATP
PPLRSRIEHAVAVAVATSVVALGVASAPVAVAEELPSGTNPFTSICMGFG
CGEFQGLDYPGAPAPTDEESITFKSFLDSLDKGLVAKVDFLAGGNKAYAF
VKSSASGEPTRIRVGEGYPDEQGNGWSSPLWVVRALNDRNVPYHFEYDLG
KGRATQTVNK*
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