prot_C-linearis_contig76.15164.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15164.1
Unique Nameprot_C-linearis_contig76.15164.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length94
Homology
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BLAST of mRNA_C-linearis_contig76.15164.1 vs. uniprot
Match: A0A6H5KXH5_9PHAE (CMD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXH5_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 5.140e-31
Identity = 58/93 (62.37%), Postives = 69/93 (74.19%), Query Frame = 0 
Query:    2 SVVRALSEHQVVLEKTTGQRNHILDRWADGKGLKLTAQEEALVVFQKSNLKYLFGETGFNPPVPPLNPISVALHNPRFGAALWAVNTEAYRRK 94
            S   A+ +  +VL K T +R+ ILD WAD + L+LT +E  L  +Q+ NLK LFGETGFNPPVP  NPISV +HNPRF AALWAVNTEAYRRK
Sbjct:    5 STAAAMDQEAIVLRKETSERDRILDNWADAEALQLTDEEANLNEYQRKNLKLLFGETGFNPPVPARNPISVTMHNPRFSAALWAVNTEAYRRK 97
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXH5_9PHAE5.140e-3162.37CMD domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:191610..191891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15164.1mRNA_C-linearis_contig76.15164.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 191610..191891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15164.1 ID=prot_C-linearis_contig76.15164.1|Name=mRNA_C-linearis_contig76.15164.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=94bp
MSVVRALSEHQVVLEKTTGQRNHILDRWADGKGLKLTAQEEALVVFQKSN
LKYLFGETGFNPPVPPLNPISVALHNPRFGAALWAVNTEAYRRK
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