prot_C-linearis_contig76.15162.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15162.1
Unique Nameprot_C-linearis_contig76.15162.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length208
Homology
BLAST of mRNA_C-linearis_contig76.15162.1 vs. uniprot
Match: D7FVU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVU8_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 2.220e-107
Identity = 163/205 (79.51%), Postives = 181/205 (88.29%), Query Frame = 0
Query:    4 APCSCFCLCVNLLPCCNAKDDALMDDDSNQGAEI-NKKQSSKWCVDDSATERVFIPDASRNKYVVVGLGGATVRMSARLDSPVLRTLPQGTVVVVAQVRSRRAHILKPMDGWASLSTENGYLILESVGRPTKYKVVYREGIFVRSTPSIEEGRIVRIAPFGTVLKATGKTDIFDAVERVEVEDGWVSMRLREDTGSGAPLLMPLN 207
            A C   C CV      + K+DAL+D+DSN   +  + K+ +KWCVDDSATERVF+PDASRNKY VVGLGGATVRM+ARLDSPVLRTLPQGTVVVVAQVRSRRAHI+KPMDGWASLSTE+GY+ILE++ RPTKYKVVYREGIFVRS+PSIE+GRIVRIAP GTVLKATGKT+IFDAVERVEVEDGWVSMRLRED GSGAPLLM LN
Sbjct:    3 ARCCGLCFCVEG----DDKEDALVDNDSNNPYQHEHSKRHAKWCVDDSATERVFVPDASRNKYQVVGLGGATVRMTARLDSPVLRTLPQGTVVVVAQVRSRRAHIIKPMDGWASLSTESGYVILEAIARPTKYKVVYREGIFVRSSPSIEDGRIVRIAPCGTVLKATGKTEIFDAVERVEVEDGWVSMRLREDKGSGAPLLMALN 203          
BLAST of mRNA_C-linearis_contig76.15162.1 vs. uniprot
Match: D7G246_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G246_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 1.180e-71
Identity = 135/202 (66.83%), Postives = 157/202 (77.72%), Query Frame = 0
Query:    7 SCFCLCVNLLPCCNAKDDALMDDDSNQGAEINKKQSSKWCVDDSATERVFIPDASRNKYVVVGLGGATVRMSARLDSPVLRTLPQGTVVVVAQVRSRRAHILKPMDGWASLSTENGYLILES-VGRPTKYKVVYREGIFVRSTPSIEEGRIVRIAPFGTVLKATGKTDIFDAVERVEVEDGWVSMRLREDTGSGAPLLMPLN 207
            SCF       PC  A DDA+       G  ++ ++S  + VDDSA+ERVFIP ASRNKYVVVGL GATVR+S RLDSPVLRTLP+GTVV VAQ+RSRRAHI+KP+DGWASLST + Y ILE  + + TKYKV+Y EGIFVR   S+E  RI RIAPFGTVLKATG+T+I+DAVER+EVEDGWVSMRLR DTG  APLL PL+
Sbjct:  364 SCF------FPC--ATDDAV-------GDSVDGRKSRSF-VDDSASERVFIPKASRNKYVVVGLVGATVRVSKRLDSPVLRTLPKGTVVEVAQIRSRRAHIVKPIDGWASLSTVSSYRILEPPITQSTKYKVIYPEGIFVRRMVSLES-RIARIAPFGTVLKATGRTEIYDAVERIEVEDGWVSMRLRNDTG--APLLSPLD 546          
BLAST of mRNA_C-linearis_contig76.15162.1 vs. uniprot
Match: D7FVU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU7_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 4.110e-58
Identity = 93/147 (63.27%), Postives = 116/147 (78.91%), Query Frame = 0
Query:   61 SRNKYVVVGLGGATVRMSARLDSPVLRTLPQGTVVVVAQVRSRRAHILKPMDGWASLSTENGYLILESVGRPTKYKVVYREGIFVRSTPSIEEGRIVRIAPFGTVLKATGKTDIFDAVERVEVEDGWVSMRLREDTGSGAPLLMPLN 207
            +R+K+VVVGL GA+VR   RLDSP+LRTL +GTVV V++VR RRAHI+KP++GWASLSTE+GY I+E   R ++YKVVY +GI VRST  IE G +V+I   G +LKATGKT I D VERV+++ GWVSMRLRED G GA LL P+ 
Sbjct:    4 NRDKFVVVGLKGASVRKELRLDSPILRTLRRGTVVSVSEVRQRRAHIVKPVNGWASLSTEDGYGIIEPTKRCSRYKVVYNDGIIVRSTAKIETGEVVKIVHPGDILKATGKTQILDGVERVQIDSGWVSMRLREDNGVGARLLAPMK 150          
BLAST of mRNA_C-linearis_contig76.15162.1 vs. uniprot
Match: A0A835YRV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV6_9STRA)

HSP 1 Score: 117 bits (293), Expect = 7.550e-27
Identity = 61/133 (45.86%), Postives = 87/133 (65.41%), Query Frame = 0
Query:   60 ASRNKYVVVGLGGATVRMSARLDSPVLRTLPQGTVVVVAQVRSRRAHILKPMDGWASLSTENGYLILESV--GRPTKYKVVYREGIFVRSTPSIEEGRIVRIAPFGTVLKATGKTDIFDAVERVEVEDGWVSM 190
            A+  ++ VVG  GATVR    LDSP+L TL  GT+V V  V+ RR  I++P+ GWAS STE GY+I+E V   RP +Y+VV+ EG+ VR+    +    VR+ P G +++ TG+    + VERV ++DGWVS+
Sbjct:   26 AAPEQFRVVGRSGATVRGGENLDSPLLCTLSPGTLVTVDLVKGRRCRIVEPVKGWASTSTEKGYVIVERVDSARP-RYRVVFSEGVVVRTAADPDNSEPVRLLPSGEIIEGTGEVVSVEGVERVRIDDGWVSV 157          
BLAST of mRNA_C-linearis_contig76.15162.1 vs. uniprot
Match: A0A7S3Y264_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y264_HETAK)

HSP 1 Score: 54.7 bits (130), Expect = 2.070e-5
Identity = 39/88 (44.32%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   59 DASRN---KYVVVGLGGATVRMSARLDSPVLRTLPQGTVVVVAQ-----------VRS-RRAHILKPMDGWASLSTENGYLILESVGR 131
            +A RN    YVVVG GGA VR+   LD+P +  L  GTVV VA            VRS RR  +L P+ GWAS +T +G  IL +  R
Sbjct:  141 EAHRNVTAAYVVVGSGGARVRIGPGLDAPAVGELAAGTVVEVATPPPPEHAGHPLVRSGRRVRVLAPVAGWASRTTGDGTPILRAHSR 228          
BLAST of mRNA_C-linearis_contig76.15162.1 vs. uniprot
Match: A0A7J6PNW5_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PNW5_PEROL)

HSP 1 Score: 54.3 bits (129), Expect = 3.710e-5
Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 0
Query:   65 YVVVGLGGATVRMSARLDSPVLRTLPQGTVVVVAQVRSRRAHILKPMDGWASLSTENGYLILESVGRPTK 134
            Y+VV   GA VR    +DSP +  L +  +  V ++  RRA I++P++GW SL T +G +I+     P +
Sbjct:   54 YIVVARQGAMVRKGIEMDSPQVHGLRRADICTVVKISGRRARIVEPVEGWVSLYTADGEVIMRQTLPPDR 123          
BLAST of mRNA_C-linearis_contig76.15162.1 vs. uniprot
Match: A0A7J6KYA0_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6KYA0_PEROL)

HSP 1 Score: 54.3 bits (129), Expect = 3.930e-5
Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 0
Query:   65 YVVVGLGGATVRMSARLDSPVLRTLPQGTVVVVAQVRSRRAHILKPMDGWASLSTENGYLILESVGRPTK 134
            Y+VV   GA VR    +DSP +  L +  +  V ++  RRA I++P++GW SL T +G +I+     P +
Sbjct:   54 YIVVARQGAMVRKGIEMDSPQVHGLRRADICTVVKISGRRARIVEPVEGWVSLYTADGEVIMRQTLPPDR 123          
BLAST of mRNA_C-linearis_contig76.15162.1 vs. uniprot
Match: A0A2M8S7Q2_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Anaerolineae bacterium CG_4_9_14_0_8_um_filter_58_9 TaxID=1973903 RepID=A0A2M8S7Q2_9CHLR)

HSP 1 Score: 53.5 bits (127), Expect = 7.250e-5
Identity = 41/142 (28.87%), Postives = 67/142 (47.18%), Query Frame = 0
Query:   58 PDASRNKYVVVGLG-GATVRMSARLDSPVLRTLPQGTVVVVAQVRSRRAHILKPMDGWASL--------STENGYLILESVGRPTKYKVVYREGIFVRSTPSIEEGRIVRIAPFGTVLKATGKTDIFDAVERVEVEDGWVSM 190
            P  S+ +   V  G G  VR +  L + +LRT+P GT V VA+++   A +     GW+S         + E   +       P + +V    G+ VR+ P+++  +I+R  PFGT+            VE VE++DGW  +
Sbjct:  423 PPLSQPRMARVTAGAGLRVRAAPNLQAQILRTMPYGTQVEVAEIKDGWARL--SAGGWSSAQWLELLPETAEPPAIPPSPPSEPKRARVTVTIGLRVRAAPNLQ-AQILRALPFGTI------------VEFVEIKDGWAHL 549          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FVU8_ECTSI2.220e-10779.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G246_ECTSI1.180e-7166.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVU7_ECTSI4.110e-5863.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YRV6_9STRA7.550e-2745.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y264_HETAK2.070e-544.32Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7J6PNW5_PEROL3.710e-535.71Uncharacterized protein n=1 Tax=Perkinsus olseni T... [more]
A0A7J6KYA0_PEROL3.930e-535.71Uncharacterized protein n=1 Tax=Perkinsus olseni T... [more]
A0A2M8S7Q2_9CHLR7.250e-528.87Uncharacterized protein (Fragment) n=1 Tax=Anaerol... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..207
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.617

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:163013..169566 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15162.1mRNA_C-linearis_contig76.15162.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 161819..169640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15162.1 ID=prot_C-linearis_contig76.15162.1|Name=mRNA_C-linearis_contig76.15162.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=208bp
MGNAPCSCFCLCVNLLPCCNAKDDALMDDDSNQGAEINKKQSSKWCVDDS
ATERVFIPDASRNKYVVVGLGGATVRMSARLDSPVLRTLPQGTVVVVAQV
RSRRAHILKPMDGWASLSTENGYLILESVGRPTKYKVVYREGIFVRSTPS
IEEGRIVRIAPFGTVLKATGKTDIFDAVERVEVEDGWVSMRLREDTGSGA
PLLMPLN*
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