prot_C-linearis_contig76.15161.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15161.1
Unique Nameprot_C-linearis_contig76.15161.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length232
Homology
BLAST of mRNA_C-linearis_contig76.15161.1 vs. uniprot
Match: D7FVU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVU1_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 2.800e-120
Identity = 185/231 (80.09%), Postives = 211/231 (91.34%), Query Frame = 0
Query:    1 MSKSSFLKCAGIVAGGLCVALPAKFLLTVNRLEKPTYGVSKTIRVGRVTAEVREYEPYLIAESVVSGGSMKEGTTKGFMNVASYIFGDNAGCRVTESGEVEPQTVAMTAPVRTERPQKAXXXXXXXXXXXVKSNFRNMRVSFVMPKKYNTGTLPKPKNKKVQIRSVGAHRMVAVHFRGRSPDEKKVAEVSRDLFQALEEEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 231
            +SK++ LK AG++ G +CVALPAKFL++V+RLE+PTY VSKT+RVGR+ AEVR+YEPYLIAESVVSG +M+EGTTKGFMNVA YIFGDNAG RV+E GEVEP  VAMTAPVRTE+PQKAXXXXXXXXXXX+KSNFRNM+VSFVMPKKY  GTLPKPK+ +V+I+SVGAHRMVAV FRG SPDEKKVAEVSR+LFQALE EGLTPKGGL++YQY PPFMPGFLR NEVAVRV
Sbjct:    9 VSKATLLKWAGVLTGAICVALPAKFLVSVSRLERPTYTVSKTVRVGRLAAEVRDYEPYLIAESVVSGETMREGTTKGFMNVAGYIFGDNAGGRVSEDGEVEPAQVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMKVSFVMPKKYTAGTLPKPKDGRVKIKSVGAHRMVAVRFRGPSPDEKKVAEVSRELFQALEGEGLTPKGGLLVYQYQPPFMPGFLRTNEVAVRV 239          
BLAST of mRNA_C-linearis_contig76.15161.1 vs. uniprot
Match: A0A7S0RNX4_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RNX4_9CHLO)

HSP 1 Score: 139 bits (349), Expect = 7.060e-37
Identity = 104/237 (43.88%), Postives = 131/237 (55.27%), Query Frame = 0
Query:   10 AGIVAGGLCVALPAKFLLTVNRLEKPTYGVSKTIRV--------GRVTAEVREYEPYLIAESVVSGGS-MKEGTTKGFMNVASYIFGDNAGCRVTESGEVEPQTVAMTAPVRTERPQKAXXXXXXXXXXXVK------SNFRNMRVSFVMPKKYNTGTLPKPKNKKVQIRSVGAHRMVAVHFRGRSPDEKKVAEVSRDLFQALEEEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 231
            AG V G L VA P    L V  LEKP Y V + +          G   AE+R Y P L+AE  V G + M+    +GF  VAS+IFG+N    VT  G+   ++VAMT+PV  E   K  XXXXXXXXXX           +  RV+F MP KY   TLPKPK+  V +R V +  + A+ F G  P E +VA+ +R L   LE EGL   G L ++QYHPPF PGF+R NEV + V
Sbjct:   15 AGSVVGLLAVAWPVASWLQVKVLEKPAYKVVRQLGRSHKLGWLRGEYGAELRRYAPILVAEVEVRGAADMRSALNQGFRKVASFIFGNNTSV-VTPGGK---ESVAMTSPVVLEVSGKGKXXXXXXXXXXXXXXGSGPDGQKVYRVAFTMPSKYTPATLPKPKDPDVVVREVPSRTLAALGFSGNLPSEARVADKARALRALLEAEGLKAHGPLHVWQYHPPFAPGFVRVNEVLLEV 247          
BLAST of mRNA_C-linearis_contig76.15161.1 vs. uniprot
Match: A0A2V0P5D1_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P5D1_9CHLO)

HSP 1 Score: 136 bits (342), Expect = 7.810e-36
Identity = 95/240 (39.58%), Postives = 130/240 (54.17%), Query Frame = 0
Query:   10 AGIVAGGLCVALPAKFLLTVNRLEKPTYGVSKTIRVGRVT-----------AEVREYEPYLIAESVVSGGSMKEGTTKGFMNVASYIFGDNAGCRVTESGEVEPQTVAMTAPVRTE-RPQKAXXXXXXXXXXXVKSNFRN------MRVSFVMPKKYNTGTLPKPKNKKVQIRSVGAHRMVAVHFRGRSPDEKKVAEVSRDLFQALEEEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 231
            AG VAGG  +  P      + + EKP Y V + +  G              AEVR YEP L+AE  V G +M+E +++GF  +A +IFG N     T +G    Q VAMT+PVR E  P + XXXXXXX      S          +R+SFVMP KY   TLP+P +  V+I+ V AH + A+ FRG+  +   V +  + L + L+ EG+TP+G + + QYHPPF  G  R NEV  R+
Sbjct:   14 AGSVAGGAALLWPLVIAYEIRKCEKPKYAVLRALAAGPGDRRRFRLGFGQYAEVRRYEPMLVAEVEVEG-NMRETSSQGFRKIARFIFGAN-----TAAGGGGSQAVAMTSPVREELMPSEXXXXXXXXVMAMGGSESLGADEKGTVRMSFVMPSKYTKETLPRPNDPSVEIKEVPAHTVAALTFRGQVRNRTVVEQRKQQLLEILKAEGITPEGAVQLNQYHPPFTYGIQRVNEVLFRI 247          
BLAST of mRNA_C-linearis_contig76.15161.1 vs. uniprot
Match: A0A383VRX5_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VRX5_TETOB)

HSP 1 Score: 130 bits (328), Expect = 9.240e-34
Identity = 98/241 (40.66%), Postives = 131/241 (54.36%), Query Frame = 0
Query:   11 GIVAGGLCVALPAKFLLTVNRLEKPTYGVSKTIR------VGRVTAEVREYEPYLIAESVVSGGSMKEGTTKGFMNVASYIFGDNAGCRVTESGEVEPQTVAMTAPVRTE---------RPQKAXXXXXXXXXXXVKSNFRN-----MRVSFVMPKKYNTGTLPKPKNKKVQIRSVGAHRMVAVHFRGRSPDEKKVAEVSRDLFQALEEEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 231
            G V GG+ V  P      V + EKP Y V + +        GR  AE+R+Y P LIAE  V GG+M++ ++ GF  +A++IFG+N     T +G+   + +AMT+PVR E           Q  XXXXXXXXXXX   +  N     +++SFVMP KY+  TLPKP N  VQI+ V  H    + FRG     + V    ++L   L  EGL P G + +YQYHPPF  G+ R NEV   V
Sbjct:   12 GSVVGGVAVLWPIGIWWEVRKCEKPKYTVIRPLGSQRNWWTGRSPAELRQYAPMLIAEVAV-GGTMRQASSSGFRKIANFIFGNN-----TAAGQGS-EKIAMTSPVRMEVEGSKKQQGSSQXXXXXXXXXXXXXXXXSLPNDAAGDVKMSFVMPSKYDAATLPKPNNPDVQIKEVPGHTAAVLTFRGHVRGRELVERKKQELATLLAAEGLVPVGEVKLYQYHPPFTYGWQRVNEVLFEV 245          
BLAST of mRNA_C-linearis_contig76.15161.1 vs. uniprot
Match: A0A7J7QEN8_9CHLO (SOUL heme-binding protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QEN8_9CHLO)

HSP 1 Score: 128 bits (321), Expect = 1.120e-32
Identity = 89/245 (36.33%), Postives = 121/245 (49.39%), Query Frame = 0
Query:   11 GIVAGGLCVALPAKFLLTVNRLEKPTYGVSKTIR------VGRVTAEVREYEPYLIAESVVSGGSMKEGTTKGFMNVASYIFGDNAGCRVTESGEVEPQTVAMTAPVRTERPQKAXXXXXXXXXXXV------------------KSNFRNMRVSFVMPKKYNTGTLPKPKNKKVQIRSVGAHRMVAVHFRGRSPDEKKVAEVSRDLFQALEEEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 231
            G V GG  V  P      V + EKP + V + +        GR  AE+R+Y P LIAE  VSG +M++ ++ GF  +A++IFG+N     T +G+   + +AMT+PVR E             XXX                    S   ++++SFVMP KYN  +LPKP N  V IR V  H    + FRG       V +  ++L   L EEGL P G + +YQYHPPF  G+ R NEV   V
Sbjct:   12 GSVVGGAAVLWPVGIWWEVRKCEKPKHTVIRPLGRQRNWWTGRSPAELRQYAPMLIAEVTVSG-TMRQASSSGFRKIANFIFGNN-----TAAGQGN-EKIAMTSPVRMEIEGSGKSSSKQQGXXXXXXXXXXXXXXXXXTESLPNSATGDVKMSFVMPSKYNAASLPKPNNADVAIREVPGHTAAVLTFRGHVRGRDLVEKKKQELVALLAEEGLVPVGDVKLYQYHPPFTYGWQRVNEVLFEV 249          
BLAST of mRNA_C-linearis_contig76.15161.1 vs. uniprot
Match: A0A7S3UFV7_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UFV7_9CHLO)

HSP 1 Score: 124 bits (312), Expect = 8.550e-32
Identity = 82/224 (36.61%), Postives = 108/224 (48.21%), Query Frame = 0
Query:   12 IVAGGLCVALPAKFLLTVNRLEKPTYGVSKTIRVGRVTAEVREYEPYLIAE-SVVSGGSMKEGTTKGFMNVASYIFGDNAGCRVTESGEVEPQTVAMTAPVRTERPQKAXXXXXXXXXXXVKSNFRNMRVSFVMPKKYNTGTLPKPKNKKVQIRSVGAHRMVAVHFRG--RSPDEKKVAEVSRDLFQALEEEGLT-PKGGLMIYQYHPPFMPGFLRRNEVAVRV 231
            +VA  +  A PA     V +LEKP Y V KT+   +   E+R YEPY++AE     G  M    + GF  +A YIF         +  E   Q +AMT+PVR E                        +VSFVMP KYN   LP   N++V IR VG   + A+ F G  RS   K + +    +   L E  LT     +M+YQYHPPF  GFLR+NEV ++V
Sbjct:    7 VVAAAILAAWPALVAYEVKKLEKPKYRVVKTLLGKKNKVEIRTYEPYVVAEYEAKEGTDMDNALSGGFRAIAGYIF-------ARDQPETTKQKIAMTSPVRLEM-----------------EGGEKHKVSFVMPSKYNKDNLPPCNNQEVNIREVGETTVAALTFSGSRRSITPKTIHDKKNRILDVLRENDLTGDPETVMVYQYHPPFTLGFLRKNEVLLKV 206          
BLAST of mRNA_C-linearis_contig76.15161.1 vs. uniprot
Match: A0A7S2KEE6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KEE6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.260e-30
Identity = 91/206 (44.17%), Postives = 115/206 (55.83%), Query Frame = 0
Query:   30 NRLEKPTYGVSKTIRVGRVTAEVREYEPYLIAESVVSGGSMKEGTTKGFMNVASYIFGDNAGCRVTESGEVEPQTVAMTAPVRTERPQKAXXXXXXXXXXXVKSNFRNM--RVSFVMPKKYNTGTLPKPKNKKVQIRSVGAHRMVAVHFRGRSPDEKKVAEVSRDLFQALEEEGLTPKGG-LMIYQYHPPFM-PGFLRRNEVAVRV 231
             +LEKP Y V + +  G    E+R+YEPY+IAE+ V G   +E T+ GF   A YIFG N   R    GE     +AMTAPVR        XXXXXXXXXX     RN   RVSFV+  KY   ++PKP ++ V IR V  H +    F G  P + +VA   + +  ALE  GL P     ++Y YH PF+ P FLRRNEVAV +
Sbjct:   53 EKLEKPVYTVIQKLPGG---VELRQYEPYMIAETTVDGVGFREPTSSGFRACAGYIFGKNKPRRGMADGE----KMAMTAPVRVSGQTSPVXXXXXXXXXXXXXXGRNKKTRVSFVIGSKYTRKSVPKPMDRNVSIRQVPRHVLATKTFAGPPPSDDRVATERQKIEYALETVGLKPTDDETLVYGYHDPFITPNFLRRNEVAVYI 251          
BLAST of mRNA_C-linearis_contig76.15161.1 vs. uniprot
Match: A0A3C1YWH2_9BACT (Heme-binding protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3C1YWH2_9BACT)

HSP 1 Score: 104 bits (260), Expect = 3.630e-24
Identity = 76/200 (38.00%), Postives = 111/200 (55.50%), Query Frame = 0
Query:   32 LEKPTYGVSKTIRVGRVTAEVREYEPYLIAESVVSGGSMKEGTTKGFMNVASYIFGDNAGCRVTESGEVEPQTVAMTAPVRTERPQKAXXXXXXXXXXXVKSNFRNMRVSFVMPKKYNTGTLPKPKNKKVQIRSVGAHRMVAVHFRGRSPDEKKVAEVSRDLFQALEEEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 231
            +E+P+Y V K+   G +  E+REY+ Y+IAE+ +S   M E +   F  +  YI G+N+              +AMTAPV T R +K XXXXXXXXXX          V+F +P KY+  T P P +  + IR V +H +  + F GR   E  + E  ++LFQ ++  G  P G  +I +Y PPFMP F+RRNE+ + +
Sbjct:   21 IEEPSYKVLKSD--GNI--EIREYQSYVIAETFISTSVMDEASNAAFKKLFKYISGNNSS----------KSDIAMTAPVTTTRSEKIXXXXXXXXXXSADG----YTVAFTLPMKYSLATSPIPTDTAIHIREVPSHTVAVIRFSGRWT-ETSMNEHEQELFQWMKSNGHVPIGIPVIARYDPPFMPWFMRRNEIQIEI 201          
BLAST of mRNA_C-linearis_contig76.15161.1 vs. uniprot
Match: A0A7S1SXM1_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SXM1_9CHLO)

HSP 1 Score: 100 bits (249), Expect = 6.190e-23
Identity = 61/163 (37.42%), Postives = 87/163 (53.37%), Query Frame = 0
Query:   69 SMKEGTTKGFMNVASYIFGDNAGCRVTESGEVEPQTVAMTAPVRTERPQKAXXXXXXXXXXXVKSNFRNMRVSFVMPKKYNTGTLPKPKNKKVQIRSVGAHRMVAVHFRGRSPDEKKVAEVSRDLFQALEEEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 231
            +++ G   GF  VA YIFG N+   V     V  + ++MT+PV  E                        RVSF+MP KY   TLP+P +  + I+   A R+ A+ + G SPD+ KVAE+++ L   L+  G  P G  M++QYHPPF P F+R+NEV +RV
Sbjct:    7 NLRSGIGAGFKGVAGYIFGKNSA--VGRKAGVS-EKISMTSPVAAELLPHGVY-----------------RVSFMMPSKYRMDTLPQPHDDAICIKERPACRLAAIRWTGASPDKGKVAEMAQRLRAKLQAAGEMPHGHPMLWQYHPPFAPAFMRQNEVLLRV 149          
BLAST of mRNA_C-linearis_contig76.15161.1 vs. uniprot
Match: A0A7Y2BJC4_9DELT (Heme-binding protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y2BJC4_9DELT)

HSP 1 Score: 100 bits (249), Expect = 2.100e-22
Identity = 80/197 (40.61%), Postives = 114/197 (57.87%), Query Frame = 0
Query:   33 EKPTYGVSKTIRVGRVTAEVREYEPYLIAESVVSGGSMKEGTTKGFMNVASYIFGDNAGCRVTESGEVEPQTVAMTAPVRTERPQKAXXXXXXXXXXXVKSNFRNMRVSFVMPKKYNTGTLPKPKNKKVQIRSVGAHRMVAVHFRGR--SPDEKKVAEVSRDLFQALEEEGLTPKGGLMIYQYHPPFMPGFLRRNEV 227
            + P Y V +T  VG V  E+REYEPYL+AE++V GG    G  +GF  +A YIFGDN   RV+       Q +AMTAPV   + +  XXXXXXXXXX  + +    RV F+MP +Y+   LP+P + ++ +R + A R  A+ + G   + + +K  E+   L  +L + G  P G  +  +Y  PF P FLRRNE+
Sbjct:   30 DSPAYSVIET--VGDV--EIREYEPYLVAETLVGGGHEGAGN-QGFRILAKYIFGDN---RVS-------QKIAMTAPVSQAKTEGTXXXXXXXXXXEKQGD--RYRVQFMMPSEYSLDELPEPNDPRIALREIPARRFAAIRYSGTWSTRNYQKNLEL---LLGSLRDAGYAPSGEPIWARYDAPFKPWFLRRNEI 206          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVU1_ECTSI2.800e-12080.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0RNX4_9CHLO7.060e-3743.88Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A2V0P5D1_9CHLO7.810e-3639.58Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A383VRX5_TETOB9.240e-3440.66Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7J7QEN8_9CHLO1.120e-3236.33SOUL heme-binding protein n=1 Tax=Scenedesmus sp. ... [more]
A0A7S3UFV7_9CHLO8.550e-3236.61Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A7S2KEE6_9STRA2.260e-3044.17Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A3C1YWH2_9BACT3.630e-2438.00Heme-binding protein n=1 Tax=Bacteroidetes bacteri... [more]
A0A7S1SXM1_9CHLO6.190e-2337.42Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A7Y2BJC4_9DELT2.100e-2240.61Heme-binding protein n=1 Tax=Myxococcales bacteriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006917SOUL haem-binding proteinPFAMPF04832SOULcoord: 32..229
e-value: 2.1E-39
score: 135.4
IPR006917SOUL haem-binding proteinPANTHERPTHR11220HEME-BINDING PROTEIN-RELATEDcoord: 26..231
IPR011256Regulatory factor, effector binding domain superfamilyGENE3D3.20.80.10coord: 31..231
e-value: 4.4E-34
score: 119.7
IPR011256Regulatory factor, effector binding domain superfamilySUPERFAMILY55136Probable bacterial effector-binding domaincoord: 118..230
IPR011256Regulatory factor, effector binding domain superfamilySUPERFAMILY55136Probable bacterial effector-binding domaincoord: 25..116
NoneNo IPR availablePANTHERPTHR11220:SF54coord: 26..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:159093..161485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15161.1mRNA_C-linearis_contig76.15161.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 159032..161725 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15161.1 ID=prot_C-linearis_contig76.15161.1|Name=mRNA_C-linearis_contig76.15161.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=232bp
MSKSSFLKCAGIVAGGLCVALPAKFLLTVNRLEKPTYGVSKTIRVGRVTA
EVREYEPYLIAESVVSGGSMKEGTTKGFMNVASYIFGDNAGCRVTESGEV
EPQTVAMTAPVRTERPQKATVAMTSPVRTEVKSNFRNMRVSFVMPKKYNT
GTLPKPKNKKVQIRSVGAHRMVAVHFRGRSPDEKKVAEVSRDLFQALEEE
GLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006917SOUL_haem-bd
IPR011256Reg_factor_effector_dom_sf