prot_C-linearis_contig76.15155.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15155.1
Unique Nameprot_C-linearis_contig76.15155.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length235
Homology
BLAST of mRNA_C-linearis_contig76.15155.1 vs. uniprot
Match: D8LCW7_ECTSI (Zinc transporter zupT, Zinc transporter ZIP, metal ion transmembrane transporter activity n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCW7_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 7.780e-91
Identity = 184/254 (72.44%), Postives = 192/254 (75.59%), Query Frame = 0
Query:    1 MRPSADLNNLQLRMAGKVQTKQQQQQPSPASALT-SAGHNKNKADNGSSDEGFMEEGGR-------------------AGAVPAEAESFAGGGGTAVEGGDNEKFVRMGVMTAVAIGIHNFPEGLATFVAALSDPSVGLAXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLPGVSEPIGAGLGWLILKDIMSELVYGILFGVVAGMMVNITTHELIPTAVRYDPADKVTTNSIVAGMAIMALSLTLFLY 234
            +RPS DLN LQL MAGKVQ     QQPSP S LT S G N N   N +   GFMEEG                     +G V +E       G  AV  GDNEK VRMG++TAVAIGIHNFPEGLATFVAALSDPSV   XXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALL GVSEPIGAGLGWLILKDIMSELVYG+LFGVVAGMMVNIT HELIPTAVRYDP DKVTTNSI+AGMAIMALSLTLFLY
Sbjct:  189 VRPSPDLNTLQLSMAGKVQA----QQPSPVSELTPSGGGNSN---NKTGVVGFMEEGSGVDQMEEAPSAXXXXXXXAPSGTVQSER------GTPAVADGDNEKLVRMGLLTAVAIGIHNFPEGLATFVAALSDPSVXXXXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDIMSELVYGLLFGVVAGMMVNITIHELIPTAVRYDPTDKVTTNSIIAGMAIMALSLTLFLY 429          
BLAST of mRNA_C-linearis_contig76.15155.1 vs. uniprot
Match: A0A6H5JKG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG5_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 5.710e-59
Identity = 115/160 (71.88%), Postives = 128/160 (80.00%), Query Frame = 0
Query:   73 GGTAVEGGDNEKFVRMGVMTAVAIGIHNFPEGLATFVAALSDPSVGLAXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLPGVSEPIGAGLGWLILKDIMSELVYGILFGVVAGMMVNITTHELIPTAVRYDPADKVTTNSIVAGMAIMALSLTLF 232
            GG     GD  K V MG++TAVAIGIHNFP+GLATFV++L+DPSV   XXXXXXXXXXXXX CVA+PVYY TG+R KAFGWALL G +EPIGA LGWLILKD+MSELVYGIL          +  H+LIPTAVR+DPADKVTTNSI AGMAIMALSL LF
Sbjct:  163 GGANAVSGDEAKLVHMGLLTAVAIGIHNFPDGLATFVSSLADPSVXXXXXXXXXXXXXXXXMCVAMPVYYGTGSRCKAFGWALLSGATEPIGAALGWLILKDVMSELVYGILXXXXXXXXXXVVIHDLIPTAVRFDPADKVTTNSISAGMAIMALSLVLF 322          
BLAST of mRNA_C-linearis_contig76.15155.1 vs. uniprot
Match: A0A7S2RNM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNM0_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.290e-58
Identity = 106/152 (69.74%), Postives = 127/152 (83.55%), Query Frame = 0
Query:   81 DNEKFVRMGVMTAVAIGIHNFPEGLATFVAALSDPSVGLAXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLPGVSEPIGAGLGWLILKDIMSELVYGILFGVVAGMMVNITTHELIPTAVRYDPADKVTTNSIVAGMAIMALSLTLF 232
            D+++ VRMG+MTA+AIGIHN PEGLATFV  L DP+VG+  XXXXXXXXXXXXXCVAIP+YYAT +RW+AF WA + G+SEPIGAGLGW +L  I+ + VYGI+FG+V GMMVNI  HEL+PTA RYDP D+ TT S +AGMA+MALSL LF
Sbjct:  217 DSQRLVRMGLMTALAIGIHNLPEGLATFVGTLDDPAVGVGLXXXXXXXXXXXXXCVAIPIYYATHDRWQAFKWAFISGISEPIGAGLGWAVLHSIIDDRVYGIVFGLVGGMMVNICIHELLPTAFRYDPGDRFTTKSFIAGMALMALSLILF 368          
BLAST of mRNA_C-linearis_contig76.15155.1 vs. uniprot
Match: A0A6V2QEW8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QEW8_HETAK)

HSP 1 Score: 194 bits (494), Expect = 2.960e-57
Identity = 109/151 (72.19%), Postives = 126/151 (83.44%), Query Frame = 0
Query:   84 KFVRMGVMTAVAIGIHNFPEGLATFVAALSDPSVGLAXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLPGVSEPIGAGLGWLILKDIMSELVYGILFGVVAGMMVNITTHELIPTAVRYDPADKVTTNSIVAGMAIMALSLTLFLY 234
            + VRMGV+TA+AIG+HNFPEGLATFVA L DPSVG A XXXXXXXXXXXXXCVAIP+YYATG+R KAFGWAL+ G+SEPIGAGLGWL+L  + S+++YG      AGMMVNI  HELIPTA R+DP D + +N +VAGMAIMALSL LF Y
Sbjct:  209 RLVRMGVLTALAIGLHNFPEGLATFVATLDDPSVGGALXXXXXXXXXXXXXCVAIPIYYATGSRAKAFGWALISGISEPIGAGLGWLVLSAVFSDVLYGXXXXXXAGMMVNICLHELIPTAHRHDPKDTIVSNCLVAGMAIMALSLVLFQY 359          
BLAST of mRNA_C-linearis_contig76.15155.1 vs. uniprot
Match: A0A7S2BFN7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BFN7_9STRA)

HSP 1 Score: 193 bits (490), Expect = 2.120e-56
Identity = 105/153 (68.63%), Postives = 128/153 (83.66%), Query Frame = 0
Query:   81 DNEK-FVRMGVMTAVAIGIHNFPEGLATFVAALSDPSVGLAXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLPGVSEPIGAGLGWLILKDIMSELVYGILFGVVAGMMVNITTHELIPTAVRYDPADKVTTNSIVAGMAIMALSLTLF 232
            D +K  V+MG+MTA+AIG+HNFPEGLATFV  L DP+VG  XXXXXXXXXXXXXXCV+IP+YYAT NRW+AF WA + G+SEPIGA LGW+ L + MS+  Y ++FG+V+GMMVNI  HELIPTAV+YDP DKVT+ S++AGM +MALSL LF
Sbjct:  228 DRQKALVKMGMMTALAIGLHNFPEGLATFVGTLDDPTVGXXXXXXXXXXXXXXXXCVSIPIYYATKNRWQAFKWAFISGISEPIGAALGWIFLANCMSDSAYAVIFGLVSGMMVNICIHELIPTAVKYDPEDKVTSKSVIAGMLVMALSLVLF 380          
BLAST of mRNA_C-linearis_contig76.15155.1 vs. uniprot
Match: A0A8J2SXP3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXP3_9STRA)

HSP 1 Score: 191 bits (484), Expect = 3.350e-56
Identity = 108/153 (70.59%), Postives = 129/153 (84.31%), Query Frame = 0
Query:   82 NEKFVRMGVMTAVAIGIHNFPEGLATFVAALSDPSVGLAXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLPGVSEPIGAGLGWLILKDIMSELVYGILFGVVAGMMVNITTHELIPTAVRYDPADKVTTNSIVAGMAIMALSLTLFLY 234
            +++   MG+MTA+AIGIHNFPEGLATFVA L DP+VG +XXXXXXXXXXXXXXCV+IP+Y+ATG+RWKAF WALL GVSE +GA LGW +LKD    L+YGI+FG+VAGMM+ I  +ELIPTA RYDP D+V T SIVAGMA+MA SL LF+Y
Sbjct:  168 DKRLESMGMMTALAIGIHNFPEGLATFVATLDDPAVGASXXXXXXXXXXXXXXCVSIPIYFATGDRWKAFRWALLSGVSEIVGALLGWALLKDHFDNLLYGIVFGMVAGMMIMICLNELIPTAHRYDPRDRVVTKSIVAGMAVMAASLCLFVY 320          
BLAST of mRNA_C-linearis_contig76.15155.1 vs. uniprot
Match: B7G5W7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5W7_PHATC)

HSP 1 Score: 190 bits (482), Expect = 4.050e-55
Identity = 105/153 (68.63%), Postives = 125/153 (81.70%), Query Frame = 0
Query:   81 DNEKFVRMGVMTAVAIGIHNFPEGLATFVAALSDPSVGLAXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLPGVSEPIGAGLGWLILKDIMSELVYGILFGVVAGMMVNITTHELIPTAVRYDPADKVTTNSIVAGMAIMALSLTLFL 233
            +++K +RM + TA+AIGIHNFPEGLATFVAAL DP VG    XXXXXXXXXXXXCVA+PVYYATGNRWKAFGWA+L G+SEP+ A LGW +L    S+ +YG+LFG+VAGMMV I+T EL+PTA RYDP D V T + ++GM IMALSL LFL
Sbjct:  237 ESKKLLRMSLNTALAIGIHNFPEGLATFVAALGDPKVGAVLAXXXXXXXXXXXXCVAMPVYYATGNRWKAFGWAMLSGMSEPVAALLGWAVLASSFSDTLYGLLFGMVAGMMVVISTRELLPTAHRYDPEDCVVTYAFISGMCIMALSLVLFL 389          
BLAST of mRNA_C-linearis_contig76.15155.1 vs. uniprot
Match: A0A7S3VFQ6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VFQ6_9STRA)

HSP 1 Score: 188 bits (477), Expect = 7.360e-55
Identity = 101/152 (66.45%), Postives = 124/152 (81.58%), Query Frame = 0
Query:   81 DNEKFVRMGVMTAVAIGIHNFPEGLATFVAALSDPSVGLAXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLPGVSEPIGAGLGWLILKDIMSELVYGILFGVVAGMMVNITTHELIPTAVRYDPADKVTTNSIVAGMAIMALSLTLF 232
            +N+K VRMG+ TAVAI +HNFPEGLATFVA L DP +G   XXXXXXXXXXXX CVA+P+YYATGNR KAF W  L G+SEP+GA LGWL+L +  S+ +YG++FG+VAGMMV I+  EL+PTA RYDP D V TNSI+AGMA+++LSL L+
Sbjct:  193 ENKKLVRMGMQTAVAIALHNFPEGLATFVAVLEDPKIGAILXXXXXXXXXXXXFCVALPIYYATGNRKKAFWWGALSGMSEPVGALLGWLVLANSFSDAIYGLMFGLVAGMMVMISLKELLPTAYRYDPGDTVVTNSIIAGMAVISLSLVLY 344          
BLAST of mRNA_C-linearis_contig76.15155.1 vs. uniprot
Match: A0A7S3QH48_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QH48_9STRA)

HSP 1 Score: 187 bits (476), Expect = 9.850e-55
Identity = 101/152 (66.45%), Postives = 123/152 (80.92%), Query Frame = 0
Query:   81 DNEKFVRMGVMTAVAIGIHNFPEGLATFVAALSDPSVGLAXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLPGVSEPIGAGLGWLILKDIMSELVYGILFGVVAGMMVNITTHELIPTAVRYDPADKVTTNSIVAGMAIMALSLTLF 232
            +N+K VRMG+ TAVAI +HNFPEGLATFVA L DP +G   XXXXXXXXXXXX CVA+P+YYATGNR KAF W  L G+SEP+GA LGWL+L +  S+ +YG++FG+VAGMMV I+  EL+PTA RYDP D V TNSI+AGM ++ALSL L+
Sbjct:  191 ENKKLVRMGMQTAVAIALHNFPEGLATFVAVLEDPKIGAILXXXXXXXXXXXXFCVALPIYYATGNRKKAFWWGALSGMSEPVGALLGWLVLANSFSDAIYGLMFGLVAGMMVMISLKELLPTAYRYDPGDTVVTNSIIAGMVVIALSLVLY 342          
BLAST of mRNA_C-linearis_contig76.15155.1 vs. uniprot
Match: F0Y6B2_AURAN (Cilia- and flagella-associated protein 206 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6B2_AURAN)

HSP 1 Score: 198 bits (503), Expect = 1.190e-54
Identity = 114/157 (72.61%), Postives = 130/157 (82.80%), Query Frame = 0
Query:   76 AVEGGDNEKFVRMGVMTAVAIGIHNFPEGLATFVAALSDPSVGLAXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLPGVSEPIGAGLGWLILKDIMSELVYGILFGVVAGMMVNITTHELIPTAVRYDPADKVTTNSIVAGMAIMALSLTLF 232
            A E   ++   RMGVMTA+AIGIHNFPEGLATFVA L DP+VG A XXXXXXXXXXXXXCV+IP+Y+ATG+RWKAF WALL GVSEP+GA LGWL+LKD  +EL+YGI+FG+VAGMMV I  +ELIPTA RYDP DKV T SI AGM +MA SL LF
Sbjct:  187 APEAAGDKPLERMGVMTALAIGIHNFPEGLATFVATLDDPAVGGALXXXXXXXXXXXXXCVSIPIYFATGDRWKAFRWALLSGVSEPVGALLGWLLLKDHFNELLYGIVFGMVAGMMVMICLNELIPTAHRYDPQDKVVTKSITAGMVVMAASLCLF 343          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCW7_ECTSI7.780e-9172.44Zinc transporter zupT, Zinc transporter ZIP, metal... [more]
A0A6H5JKG5_9PHAE5.710e-5971.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RNM0_9STRA1.290e-5869.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V2QEW8_HETAK2.960e-5772.19Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2BFN7_9STRA2.120e-5668.63Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2SXP3_9STRA3.350e-5670.59Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
B7G5W7_PHATC4.050e-5568.63Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3VFQ6_9STRA7.360e-5566.45Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S3QH48_9STRA9.850e-5566.45Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
F0Y6B2_AURAN1.190e-5472.61Cilia- and flagella-associated protein 206 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003689Zinc/iron permeasePFAMPF02535Zipcoord: 23..227
e-value: 1.6E-27
score: 96.6
NoneNo IPR availablePANTHERPTHR11040ZINC/IRON TRANSPORTERcoord: 65..227
NoneNo IPR availablePANTHERPTHR11040:SF131ZINC-REGULATED TRANSPORTER 3coord: 65..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..201
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 202..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..233
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 173..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 234..234
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..118
NoneNo IPR availableTMHMMTMhelixcoord: 179..201
NoneNo IPR availableTMHMMTMhelixcoord: 150..172
NoneNo IPR availableTMHMMTMhelixcoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 216..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:79594..80298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15155.1mRNA_C-linearis_contig76.15155.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 75940..81224 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15155.1 ID=prot_C-linearis_contig76.15155.1|Name=mRNA_C-linearis_contig76.15155.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=235bp
MRPSADLNNLQLRMAGKVQTKQQQQQPSPASALTSAGHNKNKADNGSSDE
GFMEEGGRAGAVPAEAESFAGGGGTAVEGGDNEKFVRMGVMTAVAIGIHN
FPEGLATFVAALSDPSVGLALAVAIAIHNIPEGLCVAIPVYYATGNRWKA
FGWALLPGVSEPIGAGLGWLILKDIMSELVYGILFGVVAGMMVNITTHEL
IPTAVRYDPADKVTTNSIVAGMAIMALSLTLFLY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003689ZIP