prot_C-linearis_contig75.15076.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig75.15076.1
Unique Nameprot_C-linearis_contig75.15076.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length469
Homology
BLAST of mRNA_C-linearis_contig75.15076.1 vs. uniprot
Match: D7FQ91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ91_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.530e-91
Identity = 215/492 (43.70%), Postives = 264/492 (53.66%), Query Frame = 0
Query:   19 GGWTAAGRSSAPSFWPRYLDICLVATGVRCAALLDSRRAPRGSPSVAEVLDALQEQXXXXXXXXXXXXAKSGDGGDSTIGCSVACLGLLMLEGSLFLVNRALLLRRLECFFSAESTAGTSSWGVAGDTTETRGAXXXXXXXXXXXXASSGRTSEPAPPASGSAAVAEQQQHGRRRTFALVDVRKSLALPCERSDALAPRLNIALRSAFG----STVADGVDH---------PPPRGGASDIHGGSIAAETAAMGDRADRR-GEDG---------EGEGARWLRDWETKELGLDCEGLRETLGDVGLCGLAGWLLEYPVVYCCPS-QVGSPDGTDRAGEAGGGATTANAMGNCLAAVPLTVYSLSVDLGNK-KGSGSSFHVPHEIPSDTGTGTSLQAFSFSFPERVCGPAGAEAGEEGVTAG-----------------LQELVDDFLGRLEARIARHYSSSSSDGYSCERKKQVVFGLNVSKRTETLDRVAL 468
            G W+ AG S + +FWPR+ DICL A GVRCA LLDSRRAPR SP +A+VL ALQ               +            VACLGLL+LEGS FLVNR +L+RRL   FS E+        +A +  + R                SG  +E   PA   AA A Q+ H  RR  AL+DV  +LA+P +RSD LAPRL  AL  AFG    +  A+ V+          PPPRG + +    S A ET+A  +R DR  G DG         EG GARWLRDW  KEL LDCE L +TLGDVGL G+AGWLLEYP +YCC S   G+ +G+D       G    +A GNCLAAVPLTVYSL+VDLG+K +GS S      +  S + TG   +AFSFS PE +CGP   E  E+ V  G                 L  LVD+F+  ++ R+AR   S  +   S          LNVSKR  TLD+VAL
Sbjct:   39 GDWSVAGGSRSQTFWPRFGDICLAAAGVRCAVLLDSRRAPRRSPPLADVLLALQHDQQERQQQKEHCATRDCHSDCDCNSGGVACLGLLVLEGSSFLVNRVMLVRRLNELFSGET--------IAAEPVDER--FRRSATCATDCDKKSGYGTEAVRPAVDGAASAHQR-HFDRRDLALLDVNMALAVPSDRSDVLAPRLYAALLWAFGGATVAATANSVEEGRARGPSPTPPPRGTSRE----STAMETSAKSNREDRFCGGDGVHRVPPSELEG-GARWLRDWSMKELVLDCESLVKTLGDVGLSGMAGWLLEYPAIYCCSSLNDGTTNGSD-------GKEMEHARGNCLAAVPLTVYSLAVDLGDKGRGSSSRPQPSLDERSASVTGAWFEAFSFSVPEAMCGPTETEQDEDEVNGGGACGENREERHRRTAAALHGLVDNFVQTIDRRLARLRRSGVNGNDS-------FLSLNVSKRRATLDQVAL 500          
BLAST of mRNA_C-linearis_contig75.15076.1 vs. uniprot
Match: A0A6H5LL79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL79_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 2.280e-87
Identity = 215/507 (42.41%), Postives = 268/507 (52.86%), Query Frame = 0
Query:    7 RTRAVPDAHALG---GGWTAAGRSSAPSFWPRYLDICLVATGVRCAALLDSRRAPRGSPSVAEVLDALQEQXXXXXXXXXXXXAKSGDGGDSTIGCSVACLGLLMLEGSLFLVNRALLLRRLECFFSAESTAGTSSWGVAGDTTETRGAXXXXXXXXXXXXASSGRTSEPAPPASGSAAVAEQQQHGRRRTFALVDVRKSLALPCERSDALAPRLNIALRSAFG----STVADGVDH---------PPPRGGASDIHGGSIAAETAAMGDRADRR-GEDG---------EGEGARWLRDWETKELGLDCEGLRETLGDVGLCGLAGWLLEYPVVYCCPS-QVGSPDGTDRAGEAGGGATTANAMGNCLAAVPLTVYSLSVDLGNK-KGSGSSFHVPHEIPSDTGTGTSLQAFSFSFPERVCGPAGAEAGEEGVTAG-----------------LQELVDDFLGRLEARIARHYSSSSSDGYSCERKKQVVFGLNVSKRTETLDRVAL 468
            +TR  P A A+    G W+ AG S + +FWPR+ D+CLVA GVRCA LLDSRRAPRG P +A+VL A+Q               +            VACLGLL+LEGS FLVNR +L+ RL   FS E+ A   +     D    R +              SG  +E   PA   AA A Q++ G R +  L+DV K+LA+P +RSD LAPRL  AL  AFG    +  A+ V+          PPPRG + +    S+A ET A  ++ DR  G DG         EG GARWLRD   KEL LDCE L +TLGDVGL GLAGWLLEYPV+YCC S   G+ +G+D       G    +A GNCLAAVPLTVYS +VDLG+K +G  S      +  S + TG    AFSFS PE +CGP   E  E+ V  G                 L  LVD+F+  ++ R+AR   S  +   S          LNV KR  TLD+VAL
Sbjct:   24 KTRVRPRAAAVDSNDGDWSVAGGSRSQTFWPRFGDVCLVAAGVRCAVLLDSRRAPRGFPPLADVLLAMQHDQQERQQQKERCATRDCHSDCDCSSGGVACLGLLVLEGSSFLVNRVMLVHRLNELFSGETIAAQQA-----DEMFRRSSTCATGCGKK-----SGYEAEAVRPAVDVAASAHQRRLGWRDST-LLDVNKALAVPSDRSDVLAPRLCAALLWAFGGATVAATANSVEGGRASRPSPTPPPRGTSRE----SMAMETPAKSNKEDRFCGGDGVHRVLPSELEG-GARWLRDLSMKELILDCESLVKTLGDVGLSGLAGWLLEYPVIYCCSSLNDGTSNGSD-------GKEMEHARGNCLAAVPLTVYSFAVDLGDKGRGCSSRSQPSLDERSVSATGAWFDAFSFSVPETMCGPTETEQDEDEVNGGGACGENREERHRRTAAALHGLVDNFVQTIDRRLARLRGSGDNGNGS-------FLSLNVFKRRATLDQVAL 500          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig75.15076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ91_ECTSI1.530e-9143.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LL79_9PHAE2.280e-8742.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig75contigC-linearis_contig75:88896..90622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig75.15076.1mRNA_C-linearis_contig75.15076.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig75 88626..90911 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig75.15076.1 ID=prot_C-linearis_contig75.15076.1|Name=mRNA_C-linearis_contig75.15076.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=469bp
MLVCARRTRAVPDAHALGGGWTAAGRSSAPSFWPRYLDICLVATGVRCAA
LLDSRRAPRGSPSVAEVLDALQEQEKKDQQQQQQQHAKSGDGGDSTIGCS
VACLGLLMLEGSLFLVNRALLLRRLECFFSAESTAGTSSWGVAGDTTETR
GAGAGAGAGAAAVGASSGRTSEPAPPASGSAAVAEQQQHGRRRTFALVDV
RKSLALPCERSDALAPRLNIALRSAFGSTVADGVDHPPPRGGASDIHGGS
IAAETAAMGDRADRRGEDGEGEGARWLRDWETKELGLDCEGLRETLGDVG
LCGLAGWLLEYPVVYCCPSQVGSPDGTDRAGEAGGGATTANAMGNCLAAV
PLTVYSLSVDLGNKKGSGSSFHVPHEIPSDTGTGTSLQAFSFSFPERVCG
PAGAEAGEEGVTAGLQELVDDFLGRLEARIARHYSSSSSDGYSCERKKQV
VFGLNVSKRTETLDRVAL*
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