prot_C-linearis_contig75.15064.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig75.15064.1
Unique Name	prot_C-linearis_contig75.15064.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	302

Homology

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BLAST of mRNA_C-linearis_contig75.15064.1 vs. uniprot
Match: D7FQ85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ85_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.870e-42
Identity = 118/238 (49.58%), Postives = 154/238 (64.71%), Query Frame = 0

Query:   51 PGE-KIDAQGSSGDEASPHHIEDKDKATPLATA--------------VVRHRDMKQAKDEAQSVEGLAHDQTSVVA-----LTGRGG-LSGGGGEVTAASEQHKARDHQAKRLALEVARLRSTLRATTSELNTERSTRVRIEDEWWKKMGEWEQKRGSLVASKQEAERLSRSAEEEVEKVLAESKAREAKAALDGVAREDAQRKVDSVMTHVLKVQDRLVQALQAELTMTNRAREAAQ 267
            PG+ + DA G+  D+ +P  +    +A PLAT+              +     MK +   A + + +    T+V +     LT R G  S   G+ T ASE  K RD QAKRLALEVARLRS+LR TTSELNTERSTRVR+EDEWW++M EWE++RG LVASKQEAER +R+AEE+V ++L + K RE + A + +ARE  Q K D  M  V+KVQDRL+QAL+ EL MT+RAR+AAQ
Sbjct:  244 PGDVRADASGAGDDDPAPQLLH-AGEAAPLATSKRPEVATCQQPEDRIHSTSGMKTSSAPAATTDNVKAAGTNVTSNEQDILTARSGNYSLERGDETWASEHQKTRD-QAKRLALEVARLRSSLRTTTSELNTERSTRVRLEDEWWRRMQEWEEERGRLVASKQEAERTARTAEEDVARLLVKEKDREGEVASERLARETRQEKADIAMNGVVKVQDRLIQALRTELEMTDRARQAAQ 479

[Close]

BLAST of mRNA_C-linearis_contig75.15064.1 vs. uniprot
Match: A0A6H5KFY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY5_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 8.610e-39
Identity = 113/232 (48.71%), Postives = 148/232 (63.79%), Query Frame = 0

Query:   56 DAQGSSGDEASPHHIEDKDKATPLAT-----AVVRHRD---------MKQAKDEAQSVEGLAHDQTSVVA-----LTGRGG-LSGGGGEVTAASEQHKARDHQAKRLALEVARLRSTLRATTSELNTERSTRVRIEDEWWKKMGEWEQKRGSLVASKQEAERLSRSAEEEVEKVLAESKAREAKAALDGVAREDAQRKVDSVMTHVLKVQDRLVQALQAELTMTNRAREAAQ 267
            DA G+  D+ +P  + +  +A PLAT     A  R +          MK +   A + + +    T+V +     LT R G  S   G+ T ASE    RD QAKRLALEVARLRS+LRATTSELNTERSTRVR+EDEWW++M EWE+K G LVASKQEAER +R+AEE++ ++L + K RE + A + +A+E  Q K D  M  V+ VQDRL+QAL+ EL +T+ AR AAQ
Sbjct:  239 DASGAGDDDPAPQLL-NAGEAAPLATGKRPEAATRQQPEDRMHSTSGMKTSSAPAATTDDVEAAGTNVTSNEQHILTARSGNYSLEQGDETRASEHQNTRD-QAKRLALEVARLRSSLRATTSELNTERSTRVRLEDEWWRRMQEWEEKHGCLVASKQEAERAARTAEEDMARLLVKEKNREEEVASERLAQESRQEKADIAMKGVVTVQDRLIQALRTELELTDSARRAAQ 468

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig75.15064.1 vs. uniprot

BLAST of mRNA_C-linearis_contig75.15064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FQ85_ECTSI	2.870e-42	49.58	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KFY5_9PHAE	8.610e-39	48.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 188..212
None	No IPR available	COILS	Coil	Coil	coord: 249..269

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig75	contig	C-linearis_contig75:7016..8358 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig75.15064.1	mRNA_C-linearis_contig75.15064.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig75 6868..8383 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig75.15064.1 ID=prot_C-linearis_contig75.15064.1|Name=mRNA_C-linearis_contig75.15064.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=302bp
MCTAVTKGDPPASIAVVADDDMCRQELSPLSTPEGLGESGVCKRHRKWCG
PGEKIDAQGSSGDEASPHHIEDKDKATPLATAVVRHRDMKQAKDEAQSVE
GLAHDQTSVVALTGRGGLSGGGGEVTAASEQHKARDHQAKRLALEVARLR
STLRATTSELNTERSTRVRIEDEWWKKMGEWEQKRGSLVASKQEAERLSR
SAEEEVEKVLAESKAREAKAALDGVAREDAQRKVDSVMTHVLKVQDRLVQ
ALQAELTMTNRAREAAQVRTKISAVPSGSKTFARRGDLASSKMAIFFFWM
G*