prot_C-linearis_contig75.15063.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig75.15063.1
Unique Nameprot_C-linearis_contig75.15063.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length161
Homology
BLAST of mRNA_C-linearis_contig75.15063.1 vs. uniprot
Match: A0A6H5JT31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT31_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 4.880e-39
Identity = 78/157 (49.68%), Postives = 102/157 (64.97%), Query Frame = 0
Query:    2 DVDPIAASLLNGAAAVHGGRLGTPMNTKKNGACFMNGLVSAALNMKCTEEWRGDGPALALLAAAVRTALVKFQKFMSPDGYLEEYCCGQLFGVEELERVDELTGNVQLPIDMSVEMARLYYLCAVRNITGPYSTCQQACLPWVAEVLGVKVRVVHPG 158
            D+D +A+  L GAA   GG +G P+  +  GACF   L S ALN +C+      G ALAL   A+R AL+K ++F+S DGYL EY  G LF  +E + V +L G V  P++MS ++ARLYYLCA+R+  GP+   QQA LPW AEVLG+KVRV HP 
Sbjct:   74 DIDKLASRCLEGAATSDGGGVGVPVVNEGKGACFWIALASGALNTRCST----GGAALALRTGAMRMALLKCEEFLSADGYLAEYRSGDLFDTKEHDMVMKLAGRVW-PMNMSADVARLYYLCAIRSNCGPFKYSQQAVLPWAAEVLGLKVRVFHPA 225          
BLAST of mRNA_C-linearis_contig75.15063.1 vs. uniprot
Match: D7G0G8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G8_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 8.130e-35
Identity = 73/157 (46.50%), Postives = 98/157 (62.42%), Query Frame = 0
Query:    2 DVDPIAASLLNGAAAVHGGRLGTPMNTKKNGACFMNGLVSAALNMKCTEEWRGDGPALALLAAAVRTALVKFQKFMSPDGYLEEYCCGQLFGVEELERVDELTGNVQLPIDMSVEMARLYYLCAVRNITGPYSTCQQACLPWVAEVLGVKVRVVHPG 158
            D D +A+  L GAA   GG++G P+     GAC    L S AL+ +C+      G ALAL  AA+R AL+K  +F+S DGYL EY    LF ++E + V +L G  +   ++S ++AR+YYLCAVRN  GP+   QQA +PW AEVLG+KVRV HP 
Sbjct:   66 DTDELASRCLEGAATSDGGQVGIPVANDGLGACVWIALASGALSERCST----GGAALALRTAAMRMALLKSPEFLSRDGYLAEYRSPDLFDLKEHDMVLKLAGR-EWTENISPDVARMYYLCAVRNNCGPFKYSQQAVIPWAAEVLGLKVRVFHPA 217          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig75.15063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT31_9PHAE4.880e-3949.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0G8_ECTSI8.130e-3546.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig75contigC-linearis_contig75:4695..5177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig75.15063.1mRNA_C-linearis_contig75.15063.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig75 4695..6668 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig75.15063.1 ID=prot_C-linearis_contig75.15063.1|Name=mRNA_C-linearis_contig75.15063.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=161bp
MDVDPIAASLLNGAAAVHGGRLGTPMNTKKNGACFMNGLVSAALNMKCTE
EWRGDGPALALLAAAVRTALVKFQKFMSPDGYLEEYCCGQLFGVEELERV
DELTGNVQLPIDMSVEMARLYYLCAVRNITGPYSTCQQACLPWVAEVLGV
KVRVVHPGVLL
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